Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->SPL7                                                                                  <---------SPL7                                                                                  --------->ZAT14                                                                                  <---------ZAT18                                                  <------NtERF2                  <---------ANAC58                                                 --------->ANAC58                <---------ANAC46                                                 --------->RAP2.3(2)             <---------ANAC58                                                 --------->DEAR3(1)             ------>NtERF2                                                 --------->RRTF1(2)             <------NtERF2                                                 --------->RRTF1(3)            --------->LBD16                                                 --------->ANAC58              ------>NtERF2                                                 --------->RAP2.3(3)          <------NtERF2                                                --------->RAP2.3(1)           <---------DEAR3(1)                                                --------->ERF1                --------->ATERF1(1)                                                <------NtERF2                --------->At4g35610                                                <---------LBD16              --------->LBD16                                                --------->RRTF1(1)           <---------LBD16                                     ------>ZmHOX2a(2)                       ------>NtERF2                                   --------->ARR11(3)                       --------->DEAR3(1)                                   <---------ARR14(2)                      --------->ATERF1(1)                                   <---------ARR11(3)--------->ANAC58     --------->ZAT2                                   --------->ARR14(2)--------->ANAC58     <---------ZAT2                              <---------ANAC46 <---------ATERF1(1)        --------->At4g35610                           <---------MYB52(1)<---------ABI4(2)            <---------At4g35610                          <-----------HVH21 <---------ATERF1(1)           ------>NtERF2  --------->LBD16   ----------->RAV1(2)   --------->ANAC46<---------HSFB2a(2)              <---------ATERF1(1) ----->TOE1(1)         ------>ZmHOX2a(1) --------->HSFB2a(2)            --------->ATERF1(1)    ------ ----->TOE2(1)         =====================HOX2a_HOX2a   <----------DOF2--------->DEAR3(1)   <------ -GLK1(2)    <---------ARR14(2)  ----------->ARR10------>NtERF2        <---------ATERF1(1)    <------ -CCA1(2)    --------->ARR14(2) <------NtERF2--------->ATERF1(1)    <-----------HVH21  <---------LBD16   cgtacttctgagccaaatccccttcctccgtcgcgtcgatcttcgcgagcgccgcaaggcctttcaactccgtcgcagccgcggcgtactccggagtcaa  20377400                  --------->ANAC58                  --------->ANAC58                                                             ------                 <---------LBD16                                                               ------                <---------ALFIN1                                                               ======            <------NtERF2                                                                      ------            --------->ABI4(1)                                                                  ======            <---------SPL7                                                                     <-----            ------>NtERF2                                                                      ------           --------->RAP2.3(3)                                                                 <-----           --------->RAP2.3(2)                                                                 ------           --------->DEAR3(1)                                                                 ------>NtERF2           --------->RAP2.6(2)                                                               <-------           --------->RRTF1(2)                                                              <---------          <------NtERF2                                                                   --------->ANAC58          --------->RAP2.3(1)                                                             --------->ANAC46          --------->DEAR4(2)                                                              --------->ANAC58         <---------RAP2.3(1)                                                              --------->DEAR3(1)        --------->DEAR3(1)                                                                --------->RAP2.6(2)        ------->GAMYB                                                                     ===========      --------->ANAC58                                                                    ------->GAMYB      --------->ANAC58 ----------->GT1                    <------NtERF2                  --------->MYB46(3)    ---------->DOF2    <---------ANAC46           <-----------RAV1(1)                    --------->DEAR3(2)   <<<<<<<GRF7--------->SPL7            --------->HSFB2a(2)        --------->At5g28300 --------->ARR14(2) ----------->HVH21--------->ANAC46      <---------HSFB2a(2)       ----------->GT1      <---------ARR14(2) ---->DOF2--------->ATERF1(1)       <---------ALFIN1     ------>NtERF2               ----------->ARR10 ---WRKY45--------->ORA47(2)        --------->AtMYB61   --------->DEAR3(1)        <-----------HVH21 ---WRKY38(1)<---------ALFIN1      --------->MYB46(3)  --------->DEAR3(2)      ------>ZmHOX2a(1)   <-   agcctgacaagcgccgcaccacggagcgtaaaactccaccatcgcgaagctattgttgccgacgaactcggtgaaattgtccttggtcagaaccgccacg  20377500                                                                       <---------ANAC58                                                                 ------>NtERF2                                                                <---------ALFIN1                                                                --------->DEAR3(1)                                                               --------->ATERF1(1)                                                               --------->RAP2.3(1)                                                               <------NtERF2                                  --------->ARR14(2)           --------->DEAR4(2)                               --------->ANAC46               ------>NtERF2                               --------->TOE2(1)              --------->ABI4(1)                               --------->TOE1(1)              <---------ATERF1(1)                              ====================HOX2a_HOX2a--------->DEAR3(1) --->ANAC58                ------>ZmHOX2a(1)                 --------->ANAC46 --->bZIP60(2)             =======================HOX2a_HOX2a--------->RAP2.3(2) =========bZIP_DOF      <---------ATERF1(1)                  --------->RAP2.3(3) --->ANAC58             ------>NtERF2                        --------->RAP2.6(2) ================================MYC_MYB                     <---------ATERF1(2) ----O2--------->ETT(2)--------->ARR14(2)                   --------->DEAR4(2) --->O2--------->WRKY38(1)<---------ALFIN1                  --------->RAP2.3(1)           <---------HSFC1(1) ----TGA1a             <---------ARR14(2)                   --------->ATERF1(1)           --------->HSFB2a(2) --->TGA1a          <------------MYB.PH3(1)------>ZmHOX2a(2)--------->ORA47(2)    --------->YAB1 --ALFIN1         --------->MYB52(1)<------------AtMYB77    --------->ERF1   --------->ARR11(3) --HVH21   <---------MYB46(3) ------>ZmHOX2a(1)            <---------ATERF1(1)<------ZmHOX2a(2) ====MYC_MYB      <---------DOF5.7(2)------->GAMYB        --------->ANAC46   <---------ARR11(3)    <- ---------DOF2 <---------MYB46(3) <---------ARR14(2)  ------->TEIL     <---------ANAC58   <---------HSFB2a(2)   tctttctcgtcgactggtggtaacggctcctcctcgtaaccgtgatcgccgtgatgaaactcgccgcctccttgctcgagatcatcgtaattctcgaagt  20377600                                           --------->LBD16                                          --------->TGA1a                                          --------->O2                                          <---------O2                                          <---------TGA1a                                          =================bZIP_DOF                                          --------->DEAR3(1)                                          =================bZIP_DOF                                         <------NtERF2                                        ------>NtERF2                                       --------->DEAR3(1)                                       --------->RAP2.3(3)                                       --------->DREB2C(2)                                       --------->ATERF1(2)                                       --------->RRTF1(3)                                       --------->RRTF1(2)                                       <---------DEAR3(1)                                       --------->RAP2.6(2)                                       --------->RAP2.3(2)                                      --------->RRTF1(1)                                      --------->ATERF1(1)                                      --------->RAP2.3(1)                                      --------->ORA47(2)                                      --------->DEAR4(2)                       --------->ANAC58                                      --------->ERF1                           --------->ANAC58                                    ================MYC_MYB                  ---------->DOF2                                    --------->DEAR3(1)                      <------ZmHOX2a(1)                                    ------->GAMYB                           =========================                                   --------->MYB46(3)                       =========================                                   <------------AtMYB77                 <---------ANAC46                                   =================MYC_MYB           ------>NtERF2                                   --------->DEAR3(2)                <---------DEAR3(1)                                  ------->TEIL  <----------DOF2     <---------LBD16                                 --------->ARR14(2)    <---------ANAC58 --------->DEAR3(1)         --            ===============HOX2a_HOX2a--------->RAP2.6(1)           --------->LBD16               ---            ==================HOX2a_HOX2a--------->ATERF1(1)        ------>NtERF2                 ---            ------>ZmHOX2a(2)  --------->ANAC58<---------ANAC58     --------->At4g35610           <--          --------->ARR11(3)   --------->ANAC58<---------ANAC58     <---------At4g35610          ----        <---------YAB1        --------->SPL7   <---------ANAC46   <---------LBD16                ----      <---------At4g35610   <---------SPL7<---------ANAC46       ------>ZmHOX2a(1)               <---     --------->ICU4 ------>ZmHOX2a(1)<---------ATERF1(1)     <---------GLK1(1)--------->GLK1(1)  <---   --------->At4g35610   --------------------->WRI1    <---------ANAC46------>NtERF2            <----   <---------At4g35610 ------>ZmHOX2a(1)--------->ABI4(1)<---------TOE1(2)  ========================= --------DEAR3(1)  <---------ALFIN1<---------MYB55(2)  <---------ANAC58<------NtERF2           ------   ctcggtgctgatgatcgtgctcctcctcgtggtacgaaccgccgccgtggctttgttccttggattcctccgcggcgaggaaagccaattcttcgtcgag  20377700         --------->ZAT14    --------->MYB46(3)   <------ZmHOX2a(2)  --------->ARR14(2)  <---------ARR14(2) ====HOX2a_HOX2a =========HOX2a_HOX2a ---->ZmHOX2a(2) ------>CCA1(2) ------>ARR14(1)         --------->ANAC58 ----ZmHOX2a(2)          --------->ANAC46                                                 --------->ANAC58 ----->AGP1 --------->ANAC58     <---------DOF5.7(2)                                      --------->ANAC58 ----->ARR14(2)          --------->ANAC58                                           ----------->HVH21 ------ARR14(2)        <---------ALFIN1                                           <---------At4g35610 ------ARR11(3)       <---------ZAT14                 --------->CCA1(2)           --------->At4g35610 -----GLK1(1)         --------->ZAT14            ---------->DOF2         --------->ARR11(3) =====HOX2a_HOX2a     <---------REM1(2)   >>>>>>>>>TBF1           <------ZmHOX2a(1) ----------->TGA1 ----->ARR10--------->ANAC58     --------->MYB52(1)  <----------ID1      <---------ARR11(3)   atccgatccactggacgcattctctgcacgcgagttaacgagaagaagaatgaaagagacgaagagaaggagagagatacttgtagatgacgaagccatt  20377800                          <-----------RAV1(1)                          --------->MYB111(2)          --------->At4g35610                          --------->MYB55(2)           <---------At4g35610                          --------->MYB52(2)  <---------AHL20(2)                    ---------->DOF2           <---------YAB1               ---------->DOF2    -------                   --------->YAB1          <---------YAB1                  ==========================                 *TSS     <---------MYB46(3)--------->YAB1   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  ----           <---------ANAC46<-------GAMYB  <-----------TBP   ------------------------>ANAC81----------   gttgtatgtaagtgtgtgtaatcaaagtttgttggattttgggtttttataattttcagcaaaaaaaaaaaaaaaaaaaaagagtcaagaagactgtaat  20377900                                             <---------YAB1                                       --------->ZAT18       ------->PIF5                    <---------ZAT18       ------->MYC2                    <---------ZAT14       <-------PIF5                ------->MYC4                                      --------->ALFIN1       <-------MYC3                <-------MYC2                                    <---------ANAC58       ------->MYC3                ------->MYC3                                    <---------ANAC46       <-------MYC2                <-------MYC4                                    <---------ANAC58      <---------bZIP60(2)          -------->ABF1                        ================HOX2a_HOX2a      <---------ANAC46             ------->MYC2                        =================HOX2a_HOX2a      <---------O2                 <-------MYC3                        <------ZmHOX2a(2)      <---------ANAC55(2)         --------->O2                        <---------AGP1------->PIF5      <---------TGA1a             --------->TGA1a                     <---------ARR11(3)      --------->TGA1a             <--------ABF1                       --------->ARR11(3)   ----------->HVH21              <---------O2                        --------->AGP1<-------PIF5  <-----------HVH21               <---------TGA1a       --------->WRKY38(1)        <---------bZIP60(2) -->YAB1                          <---------ANAC55(2)   --------->WRKY12============================= ===============bZIP_DOF          --------->ANAC55(2)   --------->WRKY45------>ZmHOX2a(2) ----->YAB1                   ----------------->PIF3(1)--------->DOF5.7(2)       <------ZmHOX2a(1)  - ->GT1--------->O2           ----------->HVH21      <---------YAB1   <---------CCA1(2)      <--------   aagaagtcacgtggataactcgaatgaacgagtgacacgtgtccactatgagtcatcgttgacttaaacttagatctagccaaggacgtggaagtgtcat  20378000                                                                          <---------YAB1                                                                        <---------ZAT6                                                                       <---------YAB1                                                                    <---------YAB1                                                                  -------->ATHB1                                                                  <---------ICU4                                                                  --------->ATHB12                                                                  --------->ATHB51                                                                  -------->HAHB4                                                                  <---------AHL20(2)            -----                                                                  <--------HAHB4                -----                                          ------>MYB46(1)         --------->YAB1                <----                           <---------ANAC46                      <---------ATHB51        <---------AHL20(2)                           <---------ANAC58                      <---------YAB1         <---------AHL20(2)  --------->LBD16          <---------ANAC58                      --------->ICU4       <---------YAB1  ------>ZmHOX2a(1)       --------->ALFIN1------>MYB83        --------->ICU4        <---------AHL20(2) <---------LBD16       <------NtERF2    <---------MYB59     <---------ANAC46    <---------YAB1<------ ========HOX2a_HOX2a  --------->LBD16   --------->AtMYB61   <---------ANAC58  --------->YAB1 -------- ---------->RAV1(2) <---------LBD16  <-----------GT1        <---------ANAC58 <---------YAB1 <-------- ---HVH21       ---------->DOF2<XXXXXXXXXXXXXXXXXXXXMIR778  ----------->GT1--------->YAB1<---------YAB1   gctcctggatttattgtttaaagccggagtcgtgcatataaaccaaaccaagaccaatagtgtcgtaattattagtattatgatgtttatttttattata  20378100 ---->ARR11(3)       <---------YAB1 ---->AHL20(1)    <---------AHL20(2)                 <---------YAB1                         --------- -----AHL20(1)   <---------AHL20(2)           <-------MYC3                 <---------At5g28300 ---AHL20(2)     --------->AHL20(2)           ------->MYC3                <-----------GT1<---------At4g35610 ->AHL20(2)----------->GT1            --------->ARR14(2)            <---------AHL20(2) --------->YAB1 -YAB1  --------->ALFIN1              <---------ARR14(2)  <---------AHL20(2)    --------->YAB1   tattgtacaagtgtggtaattttatatttgtagtttagcatatatacacatggttttgatttttttgtatttttttttacagtgatcactcatcagatgt  20378200                                                                        ------>ZmHOX2a(2)                                                                      <---------ARR11(3)                                                                      <---------AGP1                                                                      --------->ARR11(3)                                                                      <---------ARR14(2)                                                                 <-----------GT1                                                                <---------YAB1                                <---------ARR11(3)            --------->YAB1                                --------->ARR11(3)           <---------YAB1                                <---------ARR14(2)          --------->AHL20(2)                 ------         --------->MYB52(1)     --------->ARR14(2)        <---------AHL20(2)                   ------    --------->DAG2              --------->GLK1(2)        --------->YAB1<------ZmHOX2a(2)       ------   ---------->DOF2          --------->YAB1              <---------YAB1--------->ARR14(2) --------->TOE2(1) >At4g35610     --------->AHL20(2)                    --------->YAB1  --------->AGP1     --------->TOE1(1)   gtctaaaaagttatcggattatatatccattgaaaatctgttagaatcgatatgttttataatattataacagatctattgatcagaaacctcgtccaag  20378300  Previous    Next  AGI:  At3g54960.1    Description:  ATPDIL1-3 (PDI-LIKE 1-3); thiol-disulfide exchange intermediate. similar to ATPDIL1-4 (PDI-LIKE 1-4), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT5G60640.1); similar to protein disulfide isomerase precursor [Oldenlandia affinis] (GB:ABS11216.1); contains InterPro domain Protein disulphide isomerase; (InterPro:IPR005792); contains InterPro domain Disulphide isomerase; (InterPro:IPR005788); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thiored Range:  from: 20374287    to: 20377817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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