Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------GLK1(2)                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3) -->MYB46(1)                                   --------->AtMYB61 -->MYB83       --------->GLK1(2)              ------->GAMYB ---->P        <---------GLK1(2)               <---------ALFIN1                             <-------TEIL >ANAC46   <---------At4g35610                --------->MYB46(3)     <----------DOF2       --------->CCA1(2) >ANAC58   --------->At4g35610               -------->P ----------->ARR10                 <---------ARR14(2) >ANAC58 --------->YAB1                  --------->ANAC46--------->YAB1                   --------->ARR14(2)   acctcttgcattcagaagaatctctatgaccatacttaagtttaggcaaccacatccaaagatactcccatcttttcgacaaaatgctagtggatacagc  20355300                                                                               --------->ARR14(2)                              --------->ANAC58                                 <---------ARR14(2)                       --------->TOE2(3)                                    --------->ANAC58                       --------->YAB1                                       --------->ANAC58                     --------->ARR11(3)                          <---------ARR11(1)                     --------->AHL20(1)                          --------->ARR14(2)                     <---------ARR11(3)                          --------->ARR11(3)                    --------->CCA1(1)                            <---------ARR14(2)                <-                    --------->RVE1(1)                            <---------ARR11(3)               <--                  --------->AHL20(2)                            <---------CCA1(2)              <-----                  --------->YAB1          --------->At4g35610 <---------------AGL15       <---------At5g28300          <---------MYB52(2)  --------->ANAC58               ----------------->AG        <-----------GT1          --------->MYB46(3) <---------ICU4            ------->TEIL         --------->ANAC46<--------  <-----------RAV1(1)<---------AHL20(1)<---------At4g35610   ========================================   aattttgttggaacaaacaataatatcttaataagcacttcatcagataactcactgaatctatccatatcttgaaacccgaaaccccaagttactgttg  20355400          --------->ARR11(3) ---------->DOF2    --------->ETT(2)      --------->YAB1    <---------ETT(2)--------------->AGL15                --------->DAG2 --------At5g28300  <---------------AGL15               ---------->DOF2  <---------ATHB12 ---------GT1      ----------------->AGL1   <----------DOF2            --------->WOX13(1) ----MYB46(3)      ----------------->AGL2--------->ARR11(3)        --------->ANAC58 ---RAV1(1)  --------->TOE1(2)           <---------ARR11(3)   ---------->DOF2 ===================================MADS_MADS       <-------TEIL   --------->ANAC58----------->GT1  -   ttactgtcgacagaacttgggaccctaataagaaagaagataacatctttcaggctcataaagctaaagaagccaattagtaaacaagtgaaaactcgga  20355500                                             <---------REM1(1)                                           <---------ANAC46                                           <------MYB46(1)                                           --------->At4g35610                                           <---------ANAC55(2)                                           <------MYB83                                          --------->MYB52(2)                                          --------->MYB46(2)                                          --------->MYB59                                          --------->MYB111(1)                                    <---------GLK1(2)                                 ------>ZmHOX2a(1)                               --------->STY1(2)                                  <---------ARR11(3)                    --------->TOE1(3)     --------->MYB111(2)                     <---------ARR14(2)                    --------->TOE2(3)    <---------MYB55(1)                       --------->ARR14(2)         --------------->AtSPL3<---------STY1(2) --------->ZAT2                   <-----------GT1         --------->ZAT6       --------->ANAC46   --------->At4g35610         ----------->GT1      <------ZmHOX2a(1)       --------->ANAC58   <---------ZAT2   <---------ZAT18<---------GLK1(1)    <---------------AtSPL8    --------->ANAC58   <---------At4g35610  ---------->DOF2 <----------DOF2 --------->DOF2     --------->TOE1(2)   <---------MYB52(1)        --------->ZAT18<---------CCA1(2)   cacaaagaggaacagtactaaaccttagaaacaagctagattgttaggtgaagctgagaaattttcagtgcccaaagaactgtatatccttttcaaatct  20355600                                 --------->At5g28300                                ----------->GT1                               ----------->GT1                     --------->ANAC58                          --------->ANAC58              ----------->GT1  --------->DAG2           ---                    <------ZmHOX2a(1)                  <---------------AtSPL8              <------MYB83             <---------ZAT14---------->DOF2    ------->TEIL<-------TEIL ---------->DOF2    <------MYB46(1)          <---------ZAT6  --------->ANAC58  --------->ANAC46       --------->ANAC58      <--------P   agtagaatggtagtctgaactaggaatcaagaaagggtaaatgtaaacgaagcttgaatggtacatagcaaggaaaaaggaatatgaacaagttggttta  20355700                                                                                    ---------->DOF2                                                                                --------->YAB1                                                                             ------>MYB83                                                                            <---------ALFIN1                                                                         --------->PCF2                                                                       --------->WRKY12          <---                                     --------->ALFIN1        --------->ZAT6--------->MYB46(3)   -----          *TSS                   ---------->DOF2             <---------ALFIN1------>MYB46(1)<--------    <---------ARR14(2)       --------->ANAC58              <<<<<<<<<<<<<<<<<LFY<---------ATHB12------    <---------ARR11(3)       <----------ID1        <---------MYB52(1)  ----------->HVH21   --------->SPL7    --------->ARR14(2)       --------->ANAC58     <-------GAMYB       <---------MYB52(2) <---------SPL7    --------->ARR11(3)      --------->SPL7    <---------ALFIN1       <---------At4g35610<---------ANAC58 ------>YAB1           --------->At4g35610   ------>ZmHOX2a(1)       --------->At4g35610<---------ANAC58   tcagaagataccacaatcgctgagcatcggaacgacaaagtgttgtcctcaccgttgatactcacactggccactgacccactcatcaaagcgttcggcg  20355800                       --------->TOE2(3)   <---------AHL20(2)  --------->TOE1(3)                                                   <---------   --------->AHL20(2)  --------->YAB1                                            <---------ANAC46  --------->AHL20(2)  <---------YAB1                              --------->ANAC46     --------->AHL20(2) ---NtERF2          <-----------GT1                               --------->ANAC58     <---------AHL20(2) ->NtERF2<---------TOE2(3)                                <---------TOE2(3)      <---------ANAC58 -DEAR3(1)      <---------AHL20(2)                    <----------DOF2            <---------ANAC58 --->DEAR3(1)   --------->AHL20(2)               <---------MYB59  --------->ANAC58  ----------->GT1   tccatttaatttaggtgtttaattaccataaacgatgggcctggttatgggcctaacttttatgttatacgcccatttaacttgggtgtttaattacaaa  20355900                                                            <---------MYB59                                                            <---------------AGL15                                                            --------------->AGL15                                                           ----------------->AG                                                       <---------ANAC58                                                       <---------ANAC58                         -----              <----------DOF2                      <---------ANAC58                     ------>MYB83  <----------DOF2                                  <---------ANAC58            ----------->GT1  <---- <---------ANAC58                                 --------->ZAT2        ----------------->AGL1------>ZmHOX2a(1) <---------ANAC58                      --------->AHL20(2)  ----------------->AGL1       ------>MYB46(1) --GT1     ------>NtERF2--------->CCA1(2)--------->AHL20(2)----------------->AGL3    ------------>CBF   cttgctttagcgacgactttgacgagaaatgagaggcccaatataaaatacgagcttgcttaccaaaatttgagacccaaatagtaaaccaatctcctcc  20356000                <---------ARR14(2)            --------->ANAC58                      ---------->DOF2              --------------->ANT             --------->ANAC58                    <------NtERF2        --------->ZAT18                 <---------ARR11(3)                     --------->ZAT18        <---------ZAT18                 --------->ARR11(3)            --------->ANAC46 --------->At4g35610 ---->HSFB2a(2) --------->ARR14(2)     <---------GLK1(2)             --------->HSFB2a(2) -----HSFB2a(2)--------->GLK1(1)    --------->YAB1          *TSS     <---------HSFB2a(2)   agaatgcaagtggacacaaatccccaagagaaacagaatcaaaatctcaagaaaacctattagccctgtttccagcaagagggcagagaagcagagagag  20356100                                                               --------->ARR14(2)                                    ------>ZmHOX2a(1)    <---------GLK1(1)                         <<<<<<<<<TBF1                   --------->GLK1(1)                    <---------GLK1(2)              <---------ANAC46                   --------->HSFC1(2)           <---------MYB52(1) ------>ZmHOX2a(1)                   <---------HSFC1(2)          <---------------AGL15                   <---------At4g35610         <---------DAG2  <---------ARR14(2)             ---------->DOF2<<<<<<<<<TBF1      ======================================================   --------->ALFIN1--------->At4g35610 ------>ZmHOX2a(1)>>>>>>>>>>GATA-1 <---------At4g35610      ---   agagagtgtgagagagaaagcagcttcttcttcttctcctcctcttctcccttatgtggatttcaaatccttctctgctactctctcttcacatttctct  20356200  Previous    Next  AGI:  At3g54910.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G10400.2); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G10400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74740.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain FBD (InterPro:IPR013596); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 20353734    to: 20355710    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g54920.1    Description:  PMR6 (POWDERY MILDEW RESISTANT 6); lyase/ pectate lyase. Identical to Probable pectate lyase 13 precursor (PMR6) [Arabidopsis Thaliana] (GB:Q93Z04;GB:Q9SV40); similar to pectate lyase family protein [Arabidopsis thaliana] (TAIR:AT5G04310.1); similar to pectate lyase-like protein [Brassica napus] (GB:AAQ87025.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectate lyase/Amb allergen (InterPro:IPR002022); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050) Range:  from: 20356060    to: 20359560    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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