Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->DAG2                   ---------->DOF2               --------->TOE1(3)             ------->TEIL                  --------->ANAC58         --------------->AtSPL8            --------->ANAC46        <-----------GT1                    --------->ANAC58    <---------ARR11(3)       --------->ANAC58           <---------ICU4    <---------ARR14(2)       --------->ANAC58          <---------YAB1           --------->At4g35610    --------->ARR14(2)     --------->GLK1(1)         --------->YAB1             <---------At4g35610    --------->ARR11(3)     <---------GLK1(1)        <------ZmHOX2a(2)        <-------TEIL         --- ---------LBD16--------->TOE2(3)          --------->WOX13(1)       <---------AHL20(2)          ------   actggggatattacgaacctcaaaagtggaaacccaagttatatcaagcaatggatcatcagtacatattttagtgggattcatcagaagtagagaagag  20332000                                                                                    <---------AHL20(2)                                                                                    --------->ATHB12                                                                                    --------->AHL20(2)                                                                                    --------->ATHB51                                                                                   --------->ICU4                                                                                   <---------AHL20(2)                                                                                --------->AHL20(2)                                                                                <---------ARR11(3)                                                                              --------->ANAC58                                                                              --------->ANAC58              --------->ATHB12                                         <---------------AGL15       --------->AtLEC2 ------->TEIL                                  --------->TOE2(3)    <-------TEIL       <---------AtLEC2                               --------->TOE1(3) ------->DOF2 -------->HAHB4                         ------>NtERF2    <---------MYB59    <-----------GT1 ----->GT1   <---------ATHB12     <-----------RAV1(1)<---------At4g35610   <---------ATHB12       ---   taaagcttcattcaaatgattcaatgcatgtatagtttgtgggagagactattgcagccaattctaacaaaacctaaatcaagaaattatttgacaattt  20332100                                                      <---------ICU4                       --------->GLK1(1)             <---------YAB1                       <---------AHL20(2)                       <---------GLK1(1)       <----------DOF2                           <---------AHL20(1)           --------->MYB52(1)           <---------ARR14(2)      <-------TEIL             --------->AHL20(1)         --------->MYB46(3)             --------->ARR14(2)   <---------At4g35610      --------->AHL20(2)       --------->MYB52(1)              <------ZmHOX2a(1)     --------->At4g35610    <----------DOF2 ------->DOF2    <--------P          <---------TOE2(3)--------->ATHB12     --------->TOE2(3)   caaagagactaacaaacaggtagagaaatccattatacaaaggatttgacttttgatgatttcagatgcaaatacaaacttaaaaactttatatatttgt  20332200                  --------->AHL20(2)               --------->YAB1                       --------->GLK1(2)              <---------YAB1                   <---------YAB1             --------->ARR11(3)       --------->AHL20(2)             <---------ARR11(3)      --------->ICU4 <---------ARR11(3)              --------->RAP2.6(3)       --------->TOE2(3)             <---------ATHB12 --------->TOE2(3)            <-----------GT1       --------->TOE1(3)             --------->AHL20(2)                     <---------AHL20(2)-------   <---------WRKY38(1)         <---------TOE2(3)    --------->ARR11(3)      --------->AHL20(2)-------   <---------WRKY12      <---------YAB1     --------->ICU4          --------->AHL20(2)        <------   <---------WRKY45   <---------AHL20(2) <---------AHL20(2)         <---------AHL20(2)------->GAMYB--  --------->WRKY18(1)--------->AHL20(2)  --------->AHL20(2)     --------->ICU4     --------->MYB52(1)   attggtcaaccttaatatcataaatttatagttgaggcaataaataaatatgaaaatctaaatgcaatgtttaaatattaaaatttaacggcaaaataaa  20332300           --------->ATHB12          <---------YAB1          --------->ICU4        <---------ICU4        --------->YAB1       --------->ICU4    <---------AHL20(2)    --------->ICU4                                                    --------->O2    --------->AHL20(2)    <----------ID1                              <---------O2 -->AHL20(2)   <------MYB83                                           <---------ANAC46 -->AHL20(1) <---------WOX13(1)                                   <-----------HVH21                 *TSS ---AHL20(2)<------------CBF                <---------AtLEC2   <------------CBF           <---------ANAC58 --------->GT1 <------MYB46(1)          <----------DOF2      <---------YAB1               <---------ANAC58   atagaaaaaattatgattggtctgaaaatggacaaaatgagacttttcatgtccaaataggtgtttattgtcacgttgatgagaagactatttcgttcca  20332400                                                                <----------DOF2                                                         ---------->DOF2               ------>ZmHOX2a(1)                      --------->TOE1(3)                  --------->GLK1(2)            ------>ZmHOX2a(1)                         --------->TOE2(3)             --------->At5g28300     --------------->AtSPL8                          ----------->GT1               ----------->GT1   <---------ARR14(2)                    ------>ZmHOX2a(1) <-----------GT1   <---------HSFB2a(2)  <---------GLK1(1)                <<<<<<<<<TBF1     <---------ANAC46        --------->HSFB2a(2)   tagcatttctgttcctcctcttggttttttgggtttcttcttcctcgtcttggtttcgttaaaacccttttgaagccctctggaacagtaaaatctgagg  20332500                                                          <---------DOF5.7(2)                                                          ---------->DOF2                                                --------->WRKY38(1)                                   <---------ATHB12     --------->DOF5.7(2)                            <------ZmHOX2a(1)   --------->WRKY12                             --------       <---------TOE2(3)<---------O2            --------->WRKY45                            <--------      --------->MYB52(1)--------->O2    --------->ZAT18 <---------MYB52(1)                 <---------      <-----------GT1--------->TOE1(2)  <---------ZAT18<-------GAMYB                    ----------->GT1   gatgggattaacgaattgttgttcccacgaggagctaatgagtcgactcgttgactccgttaaagaaatatcagggttttcatcttcaaggggttttatt  20332600               ==================HOX2a_HOX2a               ------>ZmHOX2a(2)              ===================HOX2a_HOX2a              <------ZmHOX2a(2)             <---------ARR11(3)    --------->CCA1(2)       <------ZmHOX2a(2)    =============================HOX2a_HOX2a                     <---------O2    <------ZmHOX2a(2)       =================================HOX2a_HOX2a   <---------ARR11(3)      --------->ARR11(3)                    --------->O2   --------->ARR14(2)     <------ZmHOX2a(1)                      --------->bZIP60(1)   <---------ARR14(2)   <---------TOE2(2)                        <---------bZIP60(1)   --------->ARR11(3)   <---------TOE1(2)                    <---------WOX13(1) ----------->ARR10    --------->TOE1(2)     <----------DOF2--------->ATHB12                 --------- ->ATHB12    --------->ARR11(3)--------->ANAC58       <------ZmHOX2a(1)                  <------ZmHOX2a(2) -AHL20(2)   --------->ARR14(2)--------->ANAC58    --------->HSFB2a(2)                 <------ZmHOX2a(1) -DOF2       <---------ARR14(2)--------->ANAC46    <---------HSFB2a(2)             ---------->DOF2   gggaagatccaaggcgatcttgttcgtaggatcacgcttctcagccctttcttcgaggaattgattgacgtcaatgttgaattgaaaaaggatcagatta  20332700                                                                              <---------TOE1(3)                                                                              <---------TOE2(3)                                                                             <-----------RAV1(2)                                                                        <---------DAG2                                                                  ----------------------->TaNAC69(2)                                                                 --------->ANAC58                                                      <---------MYB52(1)<----------DOF2                                                    ----------->GT1  --------->ANAC58                 --------->GLK1(2)                 ===================HOX2a_HOX2a           <--------                <---------GLK1(2)                  ------>ZmHOX2a(2) --------->ANAC58       <--------      <---------TOE2(3)                   <----------DOF2        --------->ANAC58         <---------AHL20(2) >At4g35610  --------->YAB1               <---------DAG2       <------ZmHOX2a(1) --------->ARR14(2)   cagggtttgaggctatgagaatcgctcttgattcaagtcttgagctttttcgatcggttaatggaggaagcaagctttttcaggttactcatttacttgc  20332800                               <------NtERF2                            <---------ANAC58                            <---------ANAC58                           <---------ZAT2                           <---------At4g35610                           --------->ZAT2                           --------->At4g35610                          --------->MYB111(1)                          --------->MYB111(2)                    <----------DOF2                                                     <---------TOE2(3)                 <---------ARR11(3)                                        <---------GLK1(2)                 --------->ARR11(3)                                        <---------ARR11(3)                <---------CCA1(2)                                          --------->ARR11(3)      <-   <---------AHL20(2)    <--------P                                      <---------TOE1(3)         <- -ANAC58      <---------AHL20(2)   --------->DAG2                        <---------TOE2(3)    <------ -ANAC58      --------->AHL20(2)  ---------->DOF2 <----------DOF2 <---------TOE1(2)     <---------TOE1(3)   tctgttttatttgtatttatatctttggtagctggcaaaagttggcaatttcctttgttttctcttcgagggtttaagattttggtgtttagggttttgt  20332900  Previous    Next  AGI:  At3g54840.1    Description:  ARA6; GTP binding. similar to ARA7, GTP binding [Arabidopsis thaliana] (TAIR:AT4G19640.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96253.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain Rab5-related (InterPro:IPR015599); contains InterPro domain RNA polymerase sigma factor 54, interaction; (InterPro:IPR002078) Range:  from: 20329390    to: 20331979    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g54850.1    Description:  armadillo/beta-catenin repeat family protein / U-box domain-containing family protein. Identical to E3 ubiquitin-protein ligase PUB14 (PUB14) [Arabidopsis Thaliana] (GB:Q8VZ40;GB:Q9SV34); similar to armadillo/beta-catenin repeat family protein / U-box domain-containing family protein [Arabidopsis thaliana] (TAIR:AT3G46510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68909.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; Range:  from: 20332400    to: 20334998    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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