Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                   <---------MYB46(3)                                                   <----------DOF2               <---------YAB1     ---------->DOF2                             --------->HSFC1(1)   --------->AtMYB61       --------->ANAC46                                   --------->HSFB2a(2)  --------->MYB46(3)      <---------LBD16--------->ATHB12                     <---------HSFC1(1) ----YAB1   ----------->HVH21  --------->ANAC58             <---------AtMYB61 <---------HSFB2a(2) ->YAB1     ----------->TGA1   --------->ANAC58             <-----------RAV1(1)  <------ZmHOX2a(1)   agacaccaccatggatgacgatggtttcgacggaagcaaagaatgagtgctaagtttatgttttggtgcttcttcatcttctaggagaggctttgtaaca  20325600                                                                                                <----                                                                                                <----              <---------ANAC46                                                              <--------       <---------GLK1(2)                                                                    ---------      -------->HAHB4                                                                     <-----------      <--------ATHB1                                          --------->ETT(2)          <------------      <---------ICU4                                         --------->HSFB2a(2)        <------------     <---------ATHB12                             --------->At4g35610                   -------------     <---------YAB1                        <---------YAB1    <---------HSFB2a(2)        -------------     --------->ICU4                <---------ANAC46     ------>ZmHOX2a(1)        --------->ANAC58 --->ZAT6 <---------LBD16  <-----------HVH21      <---------At4g35610            --------->ANAC58   caaggtaatgattctggagtatgtcttcttgtcagtgtcgaagacatgaatgagcttcctcttctcgacatagaagaattagcaagaaaacccaaatttg  20325700      <---------ALFIN1     --------->ZAT18     <---------ZAT18     <---------ZAT14 <---------------AtSPL8 --------------->AtSPL8 --------------->AtSPL3                                                                     --------- --MYB46(1)                            --------->TOE2(3)                                    --------- --MYB83                               --------->TOE1(3)                                  <---------TOE2(3) -ARR14(2)                     <---------ANAC58                                           <---------TOE1(3) >ARR14(2)                     ----------->RAV1(2)                                       <---------DOF5.7(2) ----AGL15                     <---------ANAC46                                       --------->TOE2(3) -----AGL3                --------->ATHB12                                            --------->TOE1(3) -----AGL2              <---------ATHB12                <---------ANAC55(2)         <---------YAB1 ---->AGL3            --------->WOX13(1)              <---------AHL20(2)            <---------TOE2(3) ---->AG        --------->YAB1 <---------ANAC58       --------->AHL20(2)---------->DOF2--------->DOF5.7(2)   gtgatggtacacttccaaacatatcaatcgattgcctgaaacattaacatgagtaattaagtaaacacaaatgacaaagaagcattaacattaacgttag  20325800                                                                               >>>>>>>>>ARR2                                                                              --------->ATHB12                                                                             <---------YAB1                                          <---------ANAC58              <---------MYB46(3)                                          <---------ANAC46              <------MYB83           <---------YAB1                 <---------ANAC58          <-----------RAV1(1)            --       --------->GLK1(2)               <---------MYB52(1)      --------->At4g35610        <---------- >TOE2(3)--------->YAB1               <-------GAMYB            <---------At4g35610      <-----------HVH21 >TOE1(3)<---------ICU4              <---------ANAC46  <----------DOF2  <------MYB46(1) <-----------TGA1   aaatttgagaatcatgatacctataactcttaggccatgccgttgagtatgggctagctttagacagatgatgttggttttgattgtaagcgtcagaagt  20325900                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                             --------                                                           --------->YAB1                    <-------                                                           <---------ICU4                    --------       --------->GLK1(1)                            --------->At4g35610             <-----------HVH21  ---------->DOF2                                   <---------At4g35610        <---------ARR14(2) ------->YAB1                 ----------->HVH21 <-----------HVH21              --------->ARR14(2) -RAV1(2)                  <-----------HVH21    <-----------TGA1       <---------REM1(1)    ---------   atcagaaagagttccatcgtcgtcttcatcgtcggacaagtgttttctctcgtcatctccatcatcactctcgatgtagaggctctggtcagaagtggag  20326000                                                                         --------->ANAC46                                                                         --------->ANAC58                                                               --------->AHL20(2)                         <---------LBD16                    <----------DOF2                       <---------ARR14(2)                --------->GLK1(2) <-------TEIL          --------->ARR14(2)                --------->ARR11(3) ----ANAC58         ------>ZmHOX2a(2)                    --------->ARR14(2) ----ANAC58         ------------>CBF                     <---------ARR14(2) ----ANAC46        <------ZmHOX2a(2)                     <---------ARR11(3)             <------------CBF ->ZAT14          <---------ARR14(2)         <---------TOE2(3)--------->AHL20(2)      <---------AHL20(2) --ZAT14          --------->ARR14(2)------->TEIL        <---------ARR14(1)    <---------MYB52(2) ->ZAT18          ------->TEIL   <---------YAB1         <---------GLK1(2)--------->ANAC58           - >ALFIN1   ------------>CBF--------->LBD16   <---------TOE1(3)<---------AHL20(2)      --------->AHL20(2)   tgattcattctctcacaatggatccaatccggtttatgaatgctattaaggttatagagaatctttaaattacacaagaaacaaacaaaaaattgtatca  20326100                                                              <---------MYB52(1)                                                             <---------RAP2.6(3)     <-----------GT1                      ---------->DOF2                       ----------->GT1    --------->YAB1       <------ZmHOX2a(1)  ----------->GT1            <---------ZAT14        --------->WOX13(1)   --------->TOE1(2)----------->HVH21                ---------->DOF2<---------ANAC55(2)    <---------ZAT6 --------->DOF2   <---------ANAC46    <------ZmHOX2a(1)    <-----------------------TaNAC69(2)   gagaaagtaggagtctaggggagtgaaagggcaaaacagaggacaactagatgagtaaagagccgttaaaacgtgagtcattcatatataccagagttaa  20326200               ----------->GT1                                                            <---------YAB1        --------->WRKY18(1)              --------->YAB1       <---------WOX13(1)       --------->GLK1(2)      <------MYB46(1)                   <-------TEIL--------->YAB1                    --------->ARR11(3)      <------MYB83<-----------GT1 ------->TEIL    <-----------TBP                     <---------ARR11(3)     --------->MYB46(2)        <---------ATHB12  ------>ZmHOX2a(1)             --------->MYB52(1)     --------->MYB59       <---------ZAT14       <----------DOF2              <---------ATHB51 <-----   <---------MYB52(1)      ------------>CBF   <---------YAB1 <------------CBF --------->ICU4   ------   ccatggttaggtcaagtttgtaactatagtacaatgaatcgattcattatccttttataaactaattgaaaatatgagaaataatggagattttgatatg  20326300                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                <---------YAB1                                                   --------->YAB1--------->YAB1                                         --------->YAB1        <-----------GT1                                     --------->AHL20(1)   <---------AHL20(2)      <---------AHL20(2)             <---------AHL20(1)   --------->AHL20(2)     --------->AHL20(2)              <---------ARR11(3)   <---------AHL20(1)                      --- --------->AHL20(2)                  --------->ARR11(3)   --------->AHL20(1)                <-------- <---------AHL20(2)               --------->AHL20(2)     <---------ATHB12                   --------- ----ANAC55(2)             <-----------GT1      --------->YAB1--------->YAB1            --------->At4g35610 --->ANAC55(2)       <---------AHL20(2) <---------YAB1   --------->AHL20(2)        ---------->DOF2<--   tattaaaataaatctattagttttaaattttacaaaaaatatatcataaaaaataatcaataaattatcattttattctctatatgaaagagcagaaatg  20326400                                               --------->YAB1                                               <---------ICU4                                               -------->HAHB4                                             <---------AHL20(2)                                            --------->YAB1                                           <---------YAB1                                          --------->AHL20(2)                                          <---------AHL20(2)                                          <---------AHL20(1)                                          --------->AHL20(1)                                         --------->YAB1                                        <---------YAB1                      <-----------GT1      --------->AHL20(2)              <---------ICU4                    --------->YAB1             -- ------------>AtSPL8 <---------ANAC58 --------->YAB1                    <--------HAHB4        ------- -ARR14(2)       <<<<<<<<<SARD1<-----------GT1--------->ICU4           <---------YAB1        -------- >ARR14(2)       <<<<<<<<<CBP60g     --------->ICU4           --------->AHL20(2)            --------- -------------AtSPL8 <---------ANAC58<---------YAB1         --------->TOE2(3)       <---------TOE2(3)   gtagtacataaaatgtccaaatttcttcccaaataacttattattataataatgaaatgaaacattatatactattattaactattaagttttgaaaagt  20326500  Previous    Next  AGI:  At3g54830.1    Description:  amino acid transporter family protein. similar to amino acid transporter family protein [Arabidopsis thaliana] (TAIR:AT2G39130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68912.1); contains InterPro domain Amino acid transporter, transmembrane (InterPro:IPR013057) Range:  from: 20322879    to: 20326008    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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