Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                             --------->TOE1(3)                             --------->TOE2(3)                             <----------DOF2                          ------->TEIL                       <---------REM1(1)                      <---------TOE2(3)        <---------WOX13(1)                --------->ANAC58                --------->ARR11(3)           --------->ATHB12                <---------At4g35610                <---------AHL20(1)    <-----------GT1                        --------->At4g35610-----                --------->AHL20(1)  <---------AHL20(2)             <----------DOF2        ----------- --------DOF2--------->AHL20(2)--------->AHL20(2)   --------->YAB1 <---------DAG2--------->ANAC58<---   ctttgttgaaaacataaaaatattgatgtaactttaatttaaaccattgatttataaaaacaaaaacaactttttatacagctaagcaaggtttgtgaat  20307000                                     <---------O2                                     <---------TGA1a                                     --------->TGA1a                                     --------->O2                                   ----------->RAV1(1)                                 --------->DEAR3(2)           ---------->DOF2      --------->PCF2                          --------->AHL20(2)           ====================================bZIP_DOF                 --------->AHL20(1)     ==========================================bZIP_DOF <---------YAB1  <---------AHL20(1)   <---------YAB1         --------->CCA1(2)   --------->At4g35610     <---------AHL20(2) --------->YAB1          --------->ARR11(1)   <---------At4g35610     <---------AHL20(1) ---->AHL20(2)           <---------ARR14(2)   <------MYB46(1)         --------->AHL20(1) >GT1<----------DOF2     --------->ARR11(3)   <------MYB83   <---------AHL20(2) ------AHL20(2)        ----------->ARR10     <---------DEAR3(1)    --------->AHL20(2)        --------   aaatcatctttggtaaagtctcaatgagatatggaacccacatgagggaggtgagattacgattttttttaaaatattttagagagagagagaaggaaag  20307100                                                                            --------->YAB1                                                                           <---------YAB1                                                                  ------>MYB83--------->ICU4                                                                  ------>MYB46(1)                                                                 --------->MYB55(1)                                                                <---------MYB111(1)                                                                <---------MYB59                                                                <---------MYB111(2)                                                                <---------MYB46(2)                                         --------->ANAC58      --------->ANAC46                           ----------->GT1   ---------->DOF2   --------->ANAC58<---------ICU4  <-----                       <------ZmHOX2a(1) --------->ANAC58      --------->ANAC58--------->YAB1<-------                     --------->ANAC58 --------->At4g35610      --------->ANAC55(1)        --------->ANAC58                     --------->ANAC58 --------->ZAT2--------->ALFIN1   <----------DOF2    --------->ANAC58 -->DOF2           <--------P         <---------At4g35610    <---------ALFIN1 <---------YAB1---------   agacttccacatgaagacagggtaaggaatggtaaaatacagctagcaaaagaagtgtttctcacacctaactctttataataataagagagaagcatca  20307200                                     <---------ATHB12                                   --------->WOX13(1)                                 <---------ATHB12                                      --------->ANAC58                               --------->WOX13(1)                   <----------DOF2    --------->ANAC58 <---------ALFIN1          ---------->ID1                           <---------DAG2     --------->ANAC46 ----ALFIN1                <-----------GT1                   ------>ZmHOX2a(1)   <----------DOF2 ----HVH21                <-----------GT1                <---------ALFIN1       <---------------AGL15 >YAB1                <---------AHL20(2)               <---------ALFIN1      <-----------GT1   cccccattgctctccattactcattttttttcccaatcaatcactcttcacttctccccactccttactccttttttttttgcctttctaagcaatctct  20307300                                                      --------->AtMYB61                                                   --------->ANAC46                                                   --------->ANAC58                                                   --------->ANAC58                                                 <---------ALFIN1                             *TSS                                                --------->At4g35610                           ------>ZmHOX2a(1)                                                --------->ZAT14                            ------>ZmHOX2a(1)                                              ------>ZmHOX2a(2)                           <---------ALFIN1                                             <------ZmHOX2a(2)                  <---------GLK1(1)                                            <---------ARR14(2)                  --------->GLK1(1)                                            --------->ARR14(2)                <----------------------                                            <---------ARR11(3)        ------->GAMYB     ------>ZmHOX2a(1)                            <----------DOF2 --------->ARR11(3)     ----------->RAV1(1) <---------ALFIN1                     <---------AHL20(2)  <---------TOE1(2)         --------->MYB52(1)------>ZmHOX2a(1)   ctcttcttcttatattctcatatttgattccttttctctctcatacgatctgcacaccactactaagaacaacagaggtttgatttcctcctcctccttc  20307400                                                                                        <---------MYB46(3)                                                                                       --------->ALFIN1                                                                                      <-------GAMYB                                                                                     <---------MYB46(3)                                                                                     <---------DEAR3(2)                                                                                    <---------DEAR4(1)                                                                                    <---------ANAC46                                                                                    <---------DEAR3(1)                                                                                    <---------At1g77200                                                                                    <---------DREB2C(2)                                                                                  <-----------HVH21                                                                                 <-----------RAV1(1)                                                                                 --------->ALFIN1<---                                    --------->ICU4                              <---------HSFC1(2)                        --------------->AGL15                            <---------ATHB12        ----        <<<<<<<<<MYB2--------->GLK1(2)              --------->YAB1     --------->WOX13(1)   <------NtERF2 --ANAC81    <----------DOF2   --------->YAB1    <---------GLK1(2) <---------AtLEC2 --------->ETT(1)   ttcatttttggttttctttggaaattcttgaaattgtaatgtttttttttggaatcttgatgagtttttgcataaatcaagaagtgtcggtggaggcatt  20307500                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                            ---------                                         <----------DOF2                                    ---------          <---------ATHB12          --------->ZAT6                                      --------->ANAC46    --------->ANAC46              <-----------GT1                                       --------->ANAC58 ------AHL20(2)                  <-----------GT1                                        --------->ANAC58 ----->AHL20(2)          <---------MYB52(1)                                       <<<<<<<<<MYB2------   tatttcacaccaattgttctgaattcagttttgttttaacactctttttttttttgtaactgaaaaatttgtgttttcttcttggttttcacacaagaat  20307600      <---------WOX13(1) ------->HSFC1(1)                                  <----------DOF2 --------HSFC1(1)                      --------->At5g28300          <---------ZAT14 ------->HSFB2a(2)                  <---------TOE2(3)               --------->ZAT14 --------HSFB2a(2)         ----------->GT1  <----------DOF2 --------->TOE2(3) >ANAC58       --------->AHL20(2)   <---------At5g28300     --------->TOE1(3) >ANAC58  <---------WOX13(1)       --------->MYB52(1)    <-----------GT1 --->GLK1(1) >>>>>>>>>GATA-1       <---------DOF5.7(2)--------->YAB1--------->ZAT18 <---------------AtSPL8   tctagaagattgatagataaaatcaagaatgcttaattaacggtgacttttgacttttataaccttatagtctactgtgatttgaatttgtacatagaat  20307700                 --------->YAB1                <---------YAB1                  <---------PCF2                                <------            --------->ANAC55(2)                ----------->TCP11(1)                      <---------MYB46(3)          <-----------GT1                    --------->ALFIN1                           --------->ALFIN1          <---------AHL20(2)              --------->DAG2                             <---------TOE2(3)    <----------DOF2                     ---------->DOF2      <---------AHL20(2)      <---------TOE1(3)  ------>ZmHOX2a(1)            --------->AHL20(2)        ----------->GT1    <---------YAB1   --------   ggtcctctttatttacttatcaaaaaaaaaaaaaaaaatcaaaaaaggtgggccaaagaatgtttatttttcaaaattttgatttttaaggtggttccaa  20307800                                                                                   <---------CCA1(2)                                                                            <-----------GT1--------->ATHB51                                     ------>ZmHOX2a(1)                   --------->TOE2(3) --------->AHL20(2)  <------MYB46(1)              <---------HSFC1(2)                      <---------YAB1     <---------YAB1  <------MYB83                 --------->HSFB2a(1)                    --------->ARR11(3)  --------->ICU4 --------->MYB59               --------->HSFC1(2)                     <---------ARR11(3)--------->YAB1 -----------AGL3               <---------HSFB2a(1)            ------>ZmHOX2a(1)------->GAMYB   <----- --------->AGL3              <---------GLK1(2)       ---------->ID1--------->YAB1<---------ALFIN1   aatttggttcaaaattttcaaaacttattcagaaacttcctctgttcaaactcttgtcattttcctctataatatcattaaccccatctctcattattta  20307900  Previous    Next  AGI:  At3g54810.1    Description:  BME3/BME3-ZF (BLUE MICROPYLAR END3); transcription factor. Identical to GATA transcription factor 10 (GATA10) [Arabidopsis Thaliana] (GB:Q9SV30); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT1G08010.1); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT1G08010.2); similar to AG-motif binding protein-5 [Nicotiana tabacum] (GB:BAC98495.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain GATA transcription factor, plant (InterPro:IPR016679); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 20307394    to: 20309669    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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