Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ZAT6                                                                                 --------->MYB52(1)                                       <----------DOF2                         <---------MYB111(1)                                       <---------DAG2                          <---------MYB52(2)                                 <-----------GT1                               <---------MYB46(2)                               --------->HSFB2a(1)                       <---------ARR11(3)                         ---------->DOF2                                 --------->GLK1(2)                      --------->At4g35610                                <-----------ARR10              ------->TEIL     <---------HSFB2a(1)                       ------------------------>ANAC81       <---------HSFB2a(2)     --------->HSFC1(2)                        --------->ARR11(3)       --------->HSFB2a(2)     <---------HSFC1(2)                   --------->ANAC58      <---------LBD16 <---------At4g35610          <-----------GT1  --------->ANAC58         --------   catttgtttctggatgtatgtttcagcaaaagaaatttccacttttgtttatttcaccatttgcaattgcaagaaaatctaactaacaatagcaaaaata  20257100                                               --------->CCA1(2)                                              --------->ARR11(3)                                              <---------ARR11(3)                                              --------->AGP1                                              <---------ARR14(2)                                 <---------------AGL15     <----------ID1                                 --------------->AGL15   ---------->DOF2                                 <---------DAG2<------ZmHOX2a(2)              <---------WOX13(1)                       --------------->AtSPL8 --------->ARR14(2)            --------->ATHB51                       <---------------AtSPL8<---------GLK1(1)             <---------YAB1        --------->ANAC58   ------->TEIL      --------->GLK1(1)     ----------->GT1        --------->ANAC58   <-------TEIL     ----------->ARR10   ---------->DOF2 ->AHL20(2)     ----------->GT1  <----------DOF2 <---------ALFIN1 --------->DAG2           <------ZmHOX2a(1)   tagacaaaataagcaaaatggaaaatatgtacatacttttttgggagagatccacttgtaaaagacaaaaggtgactataattgactaattgaggactga  20257200                                                  <---------AHL20(2)                           <---------MYB46(3)<---------MYB52(1)                 <-----------RAV1(1)        --------->TOE2(3)               ------->TEIL    <--------             --------->ARR11(3)            --------->ANAC55(2)              <---------ARR14(2)            <------ZmHOX2a(1)         --------->AtMYB61                     --------->ARR14(2)      - --------->ARR11(3)      <---------MYB52(1)<---------ANAC55(2)          <---------TOE1(2)  --------->AHL20(2)   gaacatattgggaaggattttgtggccattggtttgaagaccaatacgttatttttttttatgtcattttttcgaacgtatttgaaaacccaatttaaaa  20257300                                                                                         --------->YAB1                                                                                         -------->HAHB4                                                                                  --------->ANAC58                                                                                  --------->ANAC58                                                                                  --------->ANAC46         ----------->GT1                                                        <---------ALFIN1       <---------ANAC58                                                      <---------ICU4       <---------ANAC58                                                      --------->YAB1       <---------ANAC46                                                    --------->ANAC58  <-------   <---------AHL20(2)                                                  --------->YAB1    <---------ICU4 -AHL20(2)                 --------->YAB1                             <---------YAB1  --------->YAB1 ------>TEIL         <---------YAB1                         ---------->DOF2--------->ANAC58<---------   tgtattttttcgtgtaaaaaatgatgctaacatacttgtttgattttcatctaaacaaattgcaaagcagttttcataagcatcacgctaataataccat  20257400                                --------->LBD16                    ------>ZmHOX2a(2)                --------->MYB46(3)     ----------->GT1                --------->DEAR3(1)     --------->ANAC58   <-----------GT1      <---------AHL20(2)     <---------At5g28300     --------->AHL20(2)     <---------ATHB12--------->At4g35610           <---------MYB52(1)     --------->ICU4<------ZmHOX2a(2)   --------->ANAC58  <-----------GT1 --YAB1     --------->MYB46(3) --------->DEAR3(1)----------->GT1                  <---------ICU4   <- --GT1--------->AHL20(2)   --------->MYB46(3)<-----------GT1          <---------ALFIN1             <-   tgatgcaattaatgaccaccgatcgctgaatcaccgcgaaaacgaaataacccgttaaattacccatttgcccctccgtctccattaatacacactctct  20257500                                                                   ------>ZmHOX2a(2)                                                                  <------ZmHOX2a(2)                                                                  --------->GLK1(1)                                                       <---------------AGL15                                                       --------------->AGL15                                                      ----------------->AGL2                                                      <-----------------AGL3   --------->DEAR3(1)                         --------->ANAC58             ----------------->AGL3 ------>NtERF2                         --------->ANAC58            <------ZmHOX2a(2)      --------->DREB2C(2)                   <---------At4g35610              --------->AGP1<---------GLK1(1)           ------>ZmHOX2a(2)                        <---------ARR11(3)      ------->GAMYB          <------ZmHOX2a(2)                         --------->ARR11(3)      --------->DEAR3(1)          --------->GLK1(1)          <---------ATHB12--------->CCA1(2)      --------->RAP2.6(2)          <---------GLK1(1)    --------->YAB1<-----------HVH21   --------->ARR11(3)         <---------ARR11(3)   <---------ATHB12     <---------GLK1(1)       --------->MYB46(3)         --------->ARR11(3) --------->WOX13(1)     --------->GLK1(1)     <---------ALFIN1           < ---------DOF2     --------->At4g35610      <----------DOF2      <---------ARR11(3)      <---------GLK1(1) --------DAG2    *TSS  ---------->DOF2 ---------->DOF2<-----------------AGL2--------->ANAC46      ---   gctttttttgagatctctctcagcacaaagcaatcacaaatcaaagctttcagagatccaaaaatgggatctcttccaccgccatcgctagatttctcat  20257600                                             <------ZmHOX2a(2)                                 ------                                    ------>NtERF2                                        ------>ZmHOX2a(2)                                   --------->RAP2.6(2)                                  <------ZmHOX2a(2)                                  <---------MYB55(2)                                   --------->ARR11(3)                                --------->ANAC58                                       <---------ARR11(3)                                --------->ANAC46                                       <---------ARR14(2)                                --------->ANAC58                                       --------->AGP1                              ------>ZmHOX2a(2)      --------->YAB1                    --------->ARR14(2)                             <------ZmHOX2a(2)    --------->YAB1                       --------->ARR14(3)                            --------->ARR14(2)========================HOX2a_HOX2a      <---------ARR14(3)                            <---------ARR14(2)------>ZmHOX2a(2)                        <-----------ARR10                            <-----------ARR10--------->GLK1(1)                       ----------->ARR10                           <------NtERF2     =========================HOX2a_HOX2a <---------ZAT2                          <---------MYB46(3) <---------GLK1(1)   <---------ALFIN1 --------->ZAT2                         <---------ANAC46   <---------ARR11(3) =================================HOX2a_HOX2a     --------->YAB1      <---------ANAC58   --------->ARR11(3) ------>ZmHOX2a(1) --------->ANAC58    <------ZmHOX2a(2)    <---------ANAC58  --------->GLK1(1)   ================================HOX2a_HOX2a ---------ATHB12        <---------LBD16    <---------GLK1(1)  --------->ANAC46   --------->ANAC46 ------>WOX13(1)    <---------ICU4--------->MYB46(3)<---------YAB1               --------->ANAC58<---   caatcgatcacaattccctcaaaaatggcggatccagccaccaagagatctctcatgataatctcctcaacctcttcaaatcccagcaagatcttctcaa  20257700                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                           ----------                                                                  <---------ARR14(2)       ----------                                                             --------->MYB52(1)         ----------->GT1                                                            <---------ALFIN1            <---------DEAR3(2)                                                            --------->DEAR3(1)         <---------DEAR3(1)                                                         --------->ANAC46             <------NtERF2                                                        <-----------------AGL1       ------>NtERF2                                                        ----------------->AGL1      <---------ANAC46                                           <---------ANAC55(2)    --------->ARR14(2)<---------DEAR3(1)                                           --------->ANAC55(2)   <---------MYB52(1) --------->DEAR3(1)                                           --------->ANAC46 --------->AtMYB61      --------->RAP2.3(1)           --------->ARR11(3)              --------->ANAC58--------->MYB46(3)    --------->DEAR3(1) --->WOX13(1)                              --------->ANAC58<---------MYB55(2)   <---------LBD16    <- ------ATHB12      ------>ZmHOX2a(2)<---------GLK1(1)<----------DOF2   <---------MYB52(1)--------->At5g28300   tcacttcttcaaacatctcgatctctctcaaaccctagatttctcacgcattctcctttccaccaccggtaccgttttcttcaccggcgtcggtaaatcc  20257800       <---------MYB52(2)                          ------>ZmHOX2a(1)      --------->At4g35610                      --------->ARR14(2)  <---------ANAC58                             <---------MYB52(1)  <---------ANAC58                           <---------ANAC58 --ARR14(2)                                  <---------ANAC58 ->ARR14(2)                             --------->At4g35610 -GLK1(1)                               <---------At4g35610                                         - >DOF2<---------At4g35610           ------>ZmHOX2a(1)                                            <--- ->ARR10                           --------->TOE2(3)      ------>ZmHOX2a(1)                    <----- ---------DOF2                     --------->TOE1(3) <----------DOF2        <----------DOF2  <-------   gctttcgtagctaacaaggtttcacagacgctcgtttccttaagcttccgttcctctttcctctcccctctcgatgcgcttcatggtgacattggcgctc  20257900                                           --------->DEAR3(1)                                          <------NtERF2                                         ------>NtERF2                                        <---------ALFIN1                                        --------->DEAR3(1)                                       --------->RAP2.3(1)                                       <---------ABI4(2)                                       ----------->HVH21                                       --------->ERF1                                       --------->ATERF1(1)                                       <------NtERF2                                      <---------RAP2.3(1)                                      ------>NtERF2     --------->O2                     <---------ATERF1(1)     <---------O2                    --------->bZIP60(1)     --------->bZIP60(2)             <---------bZIP60(1)     --------->ANAC46                --------->ANAC46     --------->ANAC58                --------->PCF2            ---------->ID1     --------->ANAC58              <---------ATERF1(1)    <---------MYB52(1)    ------>NtERF2              <-----------ARR10 <---------HSFC1(2)   <---------ALFIN1            --------->GLK1(2) --------->HSFC1(2) -------->ANAC46               <---------ARR14(2)<---------HSFB2a(1)                     <----------DOF2 -------DOF2                   --------->ARR14(2)--------->HSFB2a(1)            ---------->DOF2 -----DOF2                    <---------GLK1(1) <-----------ARR10               --------->MYB52(1) --ZAT18                   <---------At4g35610 <------ZmHOX2a(1)            <---------ZAT6   <-------   tttcgccacgcgatgttctcgttttcttcagcaaatctggcgccaccgaggagcttctccgtcttgtcccttgcgctagagctaaaggagcctttctggt  20258000  Previous    Next  AGI:  At3g54680.1    Description:  proteophosphoglycan-related. similar to unknown [Populus trichocarpa] (GB:ABK94808.1) Range:  from: 20255367    to: 20257058    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g54690.1    Description:  sugar isomerase (SIS) domain-containing protein / CBS domain-containing protein. similar to unknown [Populus trichocarpa] (GB:ABK93818.1); contains InterPro domain Sugar isomerase (SIS); (InterPro:IPR001347); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain KpsF/GutQ; (InterPro:IPR004800) Range:  from: 20257517    to: 20259118    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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