Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ----------->HVH21                                            <---------ARR11(3)                                            --------->ARR11(3)                                           --------->GLK1(1)               --------->AHL20(2)          <---------GLK1(1)               <---------AHL20(2)          <---------RVE1(1)         --------->ANAC58                  --------->CCA1(1)         --------->ANAC46                  --------->RVE1(1)         --------->ANAC58                 --------->ARR11(3)      --------->ANAC46                ---------->DOF2    <---------AHL20(2)      --------->YAB1    <-----------GT1               ---------->DOF2        <---------YAB1 <---------GLK1(1) <---------AHL20(2)       <---------HSFB2a(2)<---------At4g35610       <---------ARR14(2) -------->AHL20(2)        --------->HSFB2a(2)--------->At4g35610       --------->ARR14(2) ---------AHL20(2)      <-----------GT1   <---------ARR11(3)        <---------ANAC46              ---   aattttataccacacaattaatagttttacagaagaaaaagaaagatatctgactgagttttattgagttgtggataccacaattgtattgcctaaaaac  20206800                                                                  --------->YAB1                                                           --------->bZIP60(2)                                                           <---------TGA1a                                                           <---------O2                                                           --------->ANAC58                                                           --------->O2                                                           --------->ANAC58                                                           --------->TGA1a                 --------->GLK1(2)       <---------------AGL15 --------->WOX13(1)            <---------ATHB12       <---------O2            <---------bZIP60(1)        --------->AHL20(2)         <---------bZIP60(2)    <-----------STF1        <---------AHL20(2)      ----------->HVH21  --------->MYB52(1)        --------->YAB1  --------->AHL20(2)            ----------->TGA1--------->ANAC55(2)      <-------TEIL               < ------->DOF2--------->YAB1   <---------ICU4    --------->ANAC46 <---------ATHB12           ---------   aaaagaaaatataaatcataatcttgaactatttatgacgaggctaatataagtaacagagacgtcaatcacaaattcatcacaataactcgaagaaatt  20206900                                                        --------->YAB1                                                       <<<<<<<<<ARR2                                                       <---------ATHB12                                                     --------->WOX13(1)                            <-------TEIL       --------->YAB1           <---------AHL20(2)                        <---------------AtSPL3 --------->TOE1(3)       --------->YAB1      --------->ANAC46  <---------------AtSPL8 --------->TOE2(3)     --------->AHL20(2) --------->YAB1       ---------->DOF2        <-----------ARR10---------->DOF2 -------TEIL     --------->YAB1             <---------CCA1(2)--------->AtMYB61 >ARR11(3)      <---------ATHB12        --------->TOE2(3)  >>>>>>>>>>MYB80                    <------   gattcatcacgaagcgaaatcatacaaaggtacgtctaacaatctcaaatcttaacaatcaaaccaaagcatataatattctcttaccatttagttttac  20207000                                       <----------DOF2                                      ------>ZmHOX2a(2)                    <---------TOE2(3)                                    <---------AGP1  ----------->GT1       <-----------GT1                                    --------->ARR11(3)          --------->At4g35610   --------->YAB1                   <---------ARR11(3)          <---------At4g35610 --------->ANAC58                   --------->ARR14(2)        --------->DAG2 --------->ANAC58 <---------DAG2    <---------ARR14(2)       ---------->DOF2 -----GT1     --------->REM1(1)     ------->TEIL  ---------->DOF2        <-----------GT1         <---   cacaagcatagtgcctacaacctttctcatgaaaaatggatctttctgttacaaaagaaaaaaaaaagctgattttaaacgtttctaagaaatagagggc  20207100                                                            <------MYB46(1)             <---------AHL20(2)                                                           <---------TOE2(2)            --------->AHL20(2)                                                           <---------TOE1(2)       --------->AHL20(1)                                                ------->GAMYB <---------GLK1(1)    <---------ARR11(3)                                                --------->DEAR3(1)        <---------GLK1(2)                                                --------->ANAC46          --------->ARR11(3)                                   <----------ID1          <---------AtMYB61       <---------AHL20(1)                                   ----------->GT1  ---------->DOF2       --------->ARR14(3)        -                               ---------->DOF2  --------->RAP2.6(2)       <---------ARR11(3)        -                        <---------TOE2(3)      --------->MYB46(3)   --------->ANAC46--------->AHL20(2)                        <---------TOE1(3)     <---------At5g28300  --------->ANAC46--------->ARR11(3) -------DOF2         <---------AHL20(2)      <-----------GT1<------MYB83  <---------ARR14(3)        -   ttaatggcaaaatgttgaaacattttaaggctccaaagcgaaaaatttaaccgccaaagcgtaggtttccccccaagattttgaaaatatttaaaaactc  20207200          <---------AHL20(2)                                 ---------->ID1          --------->AHL20(2)                               <---------ANAC58   ------>MYB83                                            <---------ANAC58   ------>MYB46(1)                                      <----------DOF2 <---------MYB111(2)                                   <---------ANAC58 <---------MYB111(1)                                   <---------ANAC58 <---------MYB55(2)                                 <---------MYB52(1) --------->MYB46(3)                               <---------ANAC58 --------->AtMYB61                             --------->GLK1(1)         <----------DOF2 <---------MYB46(2)                           --------->ARR14(2)      ---------->ID1 -------->ANAC46                              <---------GLK1(2) ------>ZmHOX2a(1) -------->ANAC58                              <---------ARR14(2)<----------DOF2            <------NtERF2 -------->ANAC58                            *TSS  <---------ANAC58   <-----------GT1     <---------DEAR3(1)   ccaccaaactttttaattttaaaactctaatcccattctattcaaccagatttcgtttctttcgtcctttttttccttttgcattctctcgtcgtcgtct  20207300                                                    <----------DOF2                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       <---------AGP1                                       --------->AGP1  <---------ANAC58                                       <---------ARR14(2)                                       <---------ARR11(3)       <-----------GT1                 --------->ARR14(2)       <---------GLK1(2)     <---------DAG2                    --------->ARR11(3)     ------>ZmHOX2a(2)     <----------DOF2<-----------GT1   <---------GLK1(1)<---------ANAC58 --------->GLK1(2)   <-------TEIL<----------DOF2      <---------HSFB2a(2)<---------ANAC46<---------GLK1(2)       <-----   caaggtactttacttctctttttctctcttccaatattcgagatctgtttctgtctttcttggatcgattctcgattctgttcttcgatttagtcttctt  20207400                                                                            --------->HSFB2a(2)                                                                            <---------HSFC1(1)                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------AGP1                                                                         <---------ARR11(3)         ----------->GT1                                                 --------->ARR11(3)       ------>ZmHOX2a(2)                                                 --------->AGP1      <------ZmHOX2a(2)                                                ----------->ARR10      --------->CCA1(2)                                              <---------MYB52(1)     --------->ARR11(3)                                             <-------GAMYB     <---------ARR11(3)                                            ----------->GT1     --------->AGP1                                            <---------ZAT14     <---------AGP1                                            --------->REM1(2)     --------->ARR14(2)           <----------DOF2            <---------------AtSPL3     <---------ARR14(2)   <-----------GT1     <---------ANAC58 <---------SPL7   ----------->ARR10 <---------ICU4           <---------ANAC58 --------->ZAT14      ----------->GT1 -----DOF2 <--------P--------->YAB1     <---------YAB1   <---------WRKY18(1)<---------HSFB2a(2)   tcgaatagatctggtagatttaagcattatactcttctttttctgatttcgtttttgtttgactgtgtacggttagatctagaagaaggaaacaacaatt  20207500                                     --------->TOE1(2)                     <------ZmHOX2a(1)                        ---------->DOF2 <---------ANAC46          ---------->DOF2                    --------->ALFIN1--------->At4g35610        <------ZmHOX2a(1)               ---------->DOF2      --------->ZAT2    <---------At4g35610 <----------ID1            --------->ANAC58        <---------ZAT2    --------->At4g35610--------->ANAC58            --------->ANAC58<------ZmHOX2a(1)     <---------MYB46(3)     --------->ANAC58     <---------O2--------->DAG2     <---------At4g35610       <----------ID1               <---------CCA1(2)   tcaagagacatggcaggcaaaggtggaaaaggactcgtagctgcgaagacgatggctgctaacaaggacaaagacaaggacaagaagaaacccatctctc  20207600        <---------ZAT2      <-------MYC3      ------->MYC2                --------->TOE1(3)                     ------>ZmHOX2a(1)    <-------      <-------PIF5                --------->TOE2(3)                    <---------MYB59       --------      <-------MYC2      <---------At4g35610                           ----------------->AG  ---------      ----------------------->TaNAC69(2)                              ===============================      ------->PIF5      <---------CCA1(2)                          <----------DOF2          <--------      ------->MYC3  <-----------HVH21         ------>NtERF2  <---------YAB1               <----------  <---------ZAT2   <---------At4g35610       --------->DEAR3(1)<---------GLK1(2)<---------ICU4     <-   gctctgctcgtgctggtattcaggtcatctcttaaaccctaatttcgacgaccttgtttgactctgattctttcctaattcatcagtaccatttacattt  20207700  Previous    Next  AGI:  At3g54560.1    Description:  HTA11; DNA binding. Identical to Histone H2A variant 1 (H2AV) [Arabidopsis Thaliana] (GB:O23628); similar to HTA8, DNA binding [Arabidopsis thaliana] (TAIR:AT2G38810.2); similar to HTA8, DNA binding [Arabidopsis thaliana] (TAIR:AT2G38810.1); similar to HTA8, DNA binding [Arabidopsis thaliana] (TAIR:AT2G38810.3); similar to unknown [Populus trichocarpa] (GB:ABK92943.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119) Range:  from: 20207244    to: 20208628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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