Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ICU4                --------->ANAC58   --------->AtMYB61         --------->YAB1                --------->ANAC58 ------>NtERF2              <---------ATHB12          <------ZmHOX2a(1)            --------->ANAC58    --------->RAP2.6(2)     --------->MYB46(3)            ===============            --------->ANAC58 --------->ANAC46 --------->AHL20(2)                 <-----------GT1          ---------->DOF2    --------->ANAC58<---------AHL20(1)              <---------AHL20(2)   <-----------RAV1(2)       --------->ANAC58<---------AHL20(2)              --------->AHL20(2)  <------ZmHOX2a(2)   <-----------GT1        --------->AHL20(1)          ----------->GT1   agggatcaggcacaaagcaagtattaacaacaagccaccaaaactaaaatatttaagaaccaatgatactagagactgataaattacaggatgagtgatt  20189600                  --------->ARR14(2)                  <---------ARR14(2)                 ------>MYB83                 ------>MYB46(1)            <---------DOF5.7(2)          <---------MYB52(1)          --------->DOF5.7(2)         --------->TOE1(3)         --------->TOE2(3)         <-------GAMYB                                        <---------------AGL15   -------->P        ------>ZmHOX2a(2)                         --------->ANAC46                   <-----------GT1  ----------->RAV1(2)                     <---------YAB1   <-------TEIL    ------->GAMYB ==============HOX2a_HOX2a           --------->YAB1   --------->AHL20(2)----------->RAV1(1)    <<<<<<   caaaacctgatcgttaaccaaatccataagaaaacagaattatactgattccacataaaaattcgtatatatagcaacagaagaaacttacctcttcttc  20189700                                                                              --------->ZAT2                                                                              <---------ZAT2                                                                              --------->At4g35610                ----------->GT1                                              <---------ATERF1(1)            --------->ATHB12                                        <---------ALFIN1           <---------YAB1                                           --------->ANAC46    ------->GAMYB         --------->YAB1                                     <---------WOX13(1)<---------At4g35610    <---------ATHB12                               <---------At4g35610--------->ANAC46 ----------->GT1  --------->WOX13(1)                               --------->ZAT2 <---------ALFIN1<---------ALFIN1 -- <<<TBF1 <---------ICU4              --------->DEAR3(1)   --------->ATHB12   ------>NtERF2        <--   ttcccaatcaaacatgactggagaaacaaaatcgaatcacagacccaaaatcaagctccctgattgctccacacatcgccagctccacaacgaaaaaaat  20189800                                            --------->ANAC46                                            --------->ANAC58                                            --------->ANAC58                                ----------->GT1                                <---------ANAC55(2)                               <---------TOE2(3)                   ----------->GT1                              --------->MYB52(1)      --------->DAG2                <------ZmHOX2a(2)    --------->ARR14(2)           ----------->GT1                <---        <----------ID1        <---------DOF5.7(2)<---------ATHB51 <----------ID1               ------ <------ZmHOX2a(1)  --------->MYB46(3)    <---------ALFIN1----------->GT1                      ------ ======================HOX2a_HOX2a   <---------ARR14(2)  ----------->GT1   ---------->DOF2     ------ ------->LBD16 --------->ARR11(3)   --------->GLK1(1)---------->DOF2      --------->AHL20(2)  ------- -------LBD16  <---------ARR11(3)--------->TOE2(3)--------->YAB1--------->MYB52(1)           --------   ccaggaaaaaacaacaagatcaacaaatcggataacgtaaatccacacacaataataaagtggaaaaaacgataaataaaagaatattaaactgaaaaag  20189900                                      <---------ANAC58     <----------DOF2                  <---------ANAC58  --------->ANAC58                  ------>ZmHOX2a(1)                                   ---------->DOF2  --------->ANAC58           <---------ARR14(2)               ---------->DOF2           ============= -------ID1                  --------->GLK1(2)     --------->CCA1(2)               <----------ID1 --->ANAC46                  --------->ARR14(2)   --------->ARR11(3)               ----------->GT1 --->ANAC58                 <---------GLK1(2)     --------->ARR14(2)             ==================== --->ANAC58             --------->At4g35610      <------ZmHOX2a(1)               ---------->DOF2 -->DAG2                <---------At4g35610  ---------->DOF2*TSS            ----------->GT1 -->DOF2       --------->TOE2(3) ------>ZmHOX2a(1)<---------ARR14(2)   <---------At5g28300   caacaagctttgaaaaaccttgattcagcagaatcctccttcgtgctcaaaggatatgggaagagaaaggagttacagtggaaaaaagaaaaaagagttt  20190000                  ------->MYC4                  <-------MYC4                  <-------PIF4                  <-------PIF5                  ------->MYC2                  <-------MYC2                  <-------MYC3                  ------->MYC3                  ------->PIF5                           <-----------RAV1(2)                  ------->PIF4                         <-----------TGA1                 <---------ANAC58                      <-----------HVH21                 --------->ANAC55(2)                  --------->bZIP60(2)                 <---------ANAC46                     <---------bZIP60(1)                 <---------ANAC58                     <<<<<<<<<<AtbZIP1                 <---------bZIP60(2)                  --------->ANAC58                 --------->O2                         <---------TGA1a              ------->MYC3                 <---------O2  <---------MYB46(3)     --------->TGA1a              <-------MYC3                 <---------ANAC55(2)                  --------->ANAC46   --------->ARR14(2)                 --------->TGA1a                      --------->bZIP60(1)<---------ARR11(1)                 ========================================MYC_MYB         <---------ARR14(2)                 <---------TGA1a <---------ANAC46     --------->ANAC58   ------->TEIL  <---------ANAC46                ------------>OsbHLH66                 --------->O2       <-----------ARR10             <-----------HVH21--------->ALFIN1        <---------O2      <---------ARR14(1)          -    <---------AtLEC2    --------->MYB52(1)      <--------P <---------At4g35610    <-----------RAV1(1) ==========================bZIP_DOF             ================MYC_MYB <---------CCA1(2)           - ==========================bZIP_DOF       --------->MYB52(1)          --------->RAP2.6(2)           -   ttttttgtatgaaatggtcacgtgccaaacgagtggctgagagagaacgggttgccacgtcagacgagaaggccgtatctaaacatgtggctgagagtaa  20190100                                                                    --------->ARR11(3)                                                                    <---------AHL20(1)                                                                    <---------ARR11(3)                           <-----------GT1                          --------->AHL20(1)              -                        <---------ICU4                              <---------ICU4              -----             ----------->HVH21<----------DOF2          <---------TOE2(3)                        ----- -------->ANAC58  <---------At4g35610          <----------DOF2 <---------AHL20(2)               <---- -------->ANAC58  --------->At4g35610     <---------AtMYB61    --------->AHL20(2)               <---- -------->ANAC46  <---------ZAT2   <---------LBD16     <---------TOE1(3)                   <---------ZAT6   acacgacttgattccatgacagctcattttgactttccctggctgtggtcttttgttgacgtttttttaatattttcatgttatatcggattagtgttcg  20190200            --------->ANAC46                                              <---------ANAC58            --------->ANAC58                                              <---------ANAC46            --------->ANAC58                                         <------MYB83  <-------TEIL --------->DOF2                                            <----------DOF2<---------ANAC58 ---->HSFC1(1)                               <---------ARR14(2)      <------MYB46(1) ---->HSFB2a(2)     <---------ANAC46         --------->TCP20        <---------AtMYB61 -----HSFB2a(2)     ----------->GT1       --------->ALFIN1 <---------DAG2<------NtERF2 -----HSFC1(1)     --------->MYB59  ---------->DOF2<---------ZAT6   --------->MYB111(1)      --------   agaaaagaagagacacacaattgggtaaatatgtttttaaaagagtggaaccagtgttcaacttttagatttggtggggtttgagttcatagcgaccaca  20190300                                      <---------GLK1(1)                                      --------->GLK1(1)       <---------ANAC46                                    --------->YAB1            <---------ANAC58                                  <---------WOX13(1)     <---------ARR14(2)                               <---------YAB1            --------->ARR14(2)                         -                             <----------DOF2 <----------DOF2  <---------AtLEC2               <-------  <-----------GT1        <-----------GT1     <---------DAG2   <---------ANAC58  ---------->DOF2<----- ->AtMYB61       <-----------GT1--------->ATHB12    ---------->DOF2 <------ZmHOX2a(2)        <-------   atttttatcttatatgttttaactaatttagctttcattgatatccactttttcaaaagtatttgcttggatcagtttattgaaaaggaactaatgcgtt  20190400                                                             <---------ICU4                                                          --------->YAB1            --------->YAB1                                                         <---------AHL20(2)        <---------YAB1                                  <---------MYB46(3)    --------->AHL20(2)        --------->AHL20(2) ------>ZmHOX2a(1)           <---------AHL20(2)         <---------AHL20(2)        --------->AHL20(1) -------->TOE1(3)            --------->AHL20(2)     <---------AHL20(2)            <---------AHL20(2) --ANAC58                  --------->CCA1(2)     <---------AHL20(1)              --------->YAB1 ----MYB52(1)     <<<<<<<<<<<<<<<<<LFY           --------->AHL20(1)             <---------ATHB51  <-- --ANAC58    --------->MYB52(1)   --------->ATHB12<---------AHL20(2)  <---------AHL20(2)          <--   atcctgaacagttcataacgaaacagtggatataaatggttgcaattgatatatattttttaataagtgtgtttatttttcaattataatgaaatcgttt  20190500  Previous    Next  AGI:  At3g54500.1    Description:  similar to dentin sialophosphoprotein-related [Arabidopsis thaliana] (TAIR:AT5G64170.1); similar to dentin sialophosphoprotein-related [Arabidopsis thaliana] (TAIR:AT5G64170.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28297.1) Range:  from: 20186380    to: 20189960    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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