Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ------->MYC2                   ------->MYC4                   <-------MYC2                   ------->MYC3                   <-------MYC3                  --------->ANAC55(2)                  --------->O2                  ======================bZIP_bZIP                  <---------ANAC55(2)                  <---------O2        --------->TGA1a        <---------TGA1a        <---------ANAC58        <------NtERF2         <---------TGA1a       ------>NtERF2          --------->O2      <---------ANAC58        --------->ANAC58      <---------ANAC46        --------->bZIP60(2)      <---------ANAC58        --------->ANAC58   --------->ALFIN1<-------MYC4 ------ANAC46     <--------ABF1 ------ANAC58     <---------TGA1a ------ANAC58     --------->TGA1a                                                                ---- -ANAC58====================bZIP_bZIP                                                            <--- -ANAC58<---------ANAC58      <---------O2                                                  --------- -bZIP60(2)   <------ZmHOX2a(1)                   <---------MYB52(1)                        <-------- -ANAC46<---------ANAC46      --------->TGA1a ---------->ID1                           --------->YAB1   tgtgagtggcgcgtgaggacacgtgtttagccacgtcttcccagtcttgtcccttaagcttggctctgtttctgagaacccattttgactcataagcttc  20149700 ---------->DOF2 <---------ZAT14                                                   --------->At4g35610 --------->ZAT14                             ------>MYB46(1)    <---------At4g35610 ----->HSFB2a(2)             --------->YAB1  ------>MYB83    <------ZmHOX2a(1)       <-------TEIL ------HSFB2a(2)  ------>ZmHOX2a(1)     <-----------GT1<---------LBD16  <---------ANAC58     <-------GAMYB >HSFC1(2)   <---------At4g35610  --------->ANAC55(2) ------->GAMYB<---------At4g35610      <-------- -HSFC1(2)   --------->At4g35610  <---------ANAC55(2)--------->MYB46(3) <---------ANAC58 <---------ANAC46   gagtaaagtcgaaacagctccttcgctccattcatcacgttttaacctatctacaacgacggaggaagcagatggcttcttaagcgattcgtcgtggttg  20149800                      <---------GLK1(2)                <---------MYB46(3)              --------------------->WRI1            --------->At4g35610             <---------ANAC58                       <---------At4g35610        <---------ARR11(3)                 <---------AHL20(2)        --------->ARR11(3)             <---------AHL20(2)        <---------GLK1(2)             <---------ARR11(3)       <------------------------ANAC81<---------AHL20(1)      <---------TOE2(3)  <-----------GT1 <---------AHL20(2)               <------ZmHOX2a(1)       ---  --------->CCA1(2) ----------->ARR10<---------CCA1(2)                  --------->ANAC58   ---------- -MYB46(3)   <---------ANAC58 <---------MYB52(1)  <-----------RAV1(2)   --------->ANAC58 <---------YAB1   agagatttgagattttcttggttagattctccgttctccatatattttttcttcaggtgactaaaaacagagacaaggactcaagagtgtgatgaaagga  20149900                                                                                                   <-                                                                                                   --                                                                                                <----           --------->ARR11(3)                                                                   -----           <-----------ARR10                <----------DOF2                                     <----           <---------ARR11(3)              <---------DAG2                                       -----  ---------->DOF2              ---------->DOF2                        --------->TOE1(2)     --------- ------->DOF2           <----------DOF2   --------->HSFB2a(1)         --------->TOE2(2)  --------->ARR14(2) >DOF2   ----------->ARR10 <---------YAB1 <---------HSFB2a(1) ----------->GT1            <---------ARR14(2)   gaaagaaagagaagattttagcaagtcttttgataaagatgggaaccttttgagagagtgaatggagttaaacatatgagaactgtgtaagaatacgctg  20150000                                    <---------ARR14(2)                                   <---------CCA1(2)                  ---------->DOF2                               --------->ANAC58                    <---------ANAC46             --------->MYB46(3)--------->ANAC46               <---------TGA1a --------At4g35610             --------->ANAC58               --------->bZIP60(2) ------->At4g35610          <-------TEIL                      --------->TGA1a -----ZAT2  -------->P   <---------ANAC58  <---------TOE2(2)  ===================bZIP_DOF ---->At4g35610          <---------ANAC58  <---------TOE1(2)  <---------O2 -----At4g35610  <---------ATHB12<<<<<<<<CAMTA3               --------->O2 ---->ZAT2 --------->MYB52(1)<---------ALFIN1          <---------ANAC58               <---------YAB1 >ANAC46 <---------MYB52(2) <---------REM1(2)          <---------ANAC58            --------->ICU4   ctgctctcaaaactaaccaatgagtttgggtacacgcgtttctcgcatgttcaatggtcgtgcctcgtgacttaaagctaatgaaattatgtttttcact  20150100                                                                                    --------->DREB2C(2)                                                                                    --------->DEAR3(1)                                                                                    ------->PIF5                                                                                    <-------PIF5                                                <---------ICU4                     <---------LBD16                                      <---------ANAC46                             --------->DEAR3(2)                                   <---------TOE1(3)                            --------->ZAT18                                   <---------TOE2(3)                         <------------CBF                                <---------AHL20(2)                          --------->ATHB51                             <---------------AGL15                          --------->ATHB12       --                             --------------->AGL15                          <---------ICU4         --                            <-----------------AGL3                         <---------YAB1        ----      <---------At5g28300  ------------>CBF    --------->ICU4          --------->ANAC58     <--------     <-----------GT1*TSS ---------->ID1 ----------->GT1                --------->ANAC58 <----------DOF2   tatattgttactgtcattttagtctttgttccaatttatggtttgtataaagattacaaatacaaacagagaaacgcataattgcaccggctttatactt  20150200                          ----------->HVH21                         <-----------HVH21                        --------->ANAC58                                         <---------YAB1                        --------->bZIP60(2)                                  <-------GAMYB      ---------->DOF2   --------->ANAC55(1)                                 <------MYB83 ------->TOE1(3)        --------->ANAC58                 ----------->GT1    <------MYB46(1) ------->TOE2(3)        --------->ANAC46                 <----------ID1   --------->ALFIN1 ---->P              -------->P                      ---------->DOF2   --------->DAG2 ---GT1     --------->MYB52(2)                 <------ZmHOX2a(1)      ---------->DOF2   accttcacaaaagttagtggagcaacccgtcacacacacatactatagaggagaataaagagaaaaatgtgagaaagtgggttaccattgaaaaataggg  20150300                                                              --------->ICU4                                                              <---------YAB1                                                            --------->YAB1                                                            <---------ICU4                                                           --------->ICU4<---------ARR11(3)                                                           <---------ATHB12                                        <---------YAB1     <---------ATHB51                                  <-----------GT1 <---------AHL20(2)     --------->GLK1(2)        <---------AHL20(2)   ----------->GT1 <---------AHL20(2)--------->ATHB12      <----------DOF2       <---------TOE2(3)--------->AHL20(2)<---------ICU4----------->RAV1(2) <----------DOF2     ----------->GT1 <----------DOF2  <-----------GT1    --------->ARR11(3)<---------   tttcttttcttttatttgtcaacttgaaaaaaggttttacttttgattttattttttcacaataatgatttcaaaaatcttctgatgcaaatgcttttat  20150400                                                       <---------ANAC46                      --------                                                       <---------ANAC58                     ---------                                                  <---------ANAC46                       --------->MYB52(1)                                     <----------DOF2   <---------ANAC58             --------->ANAC58                                   <---------------AGL15                        <-----------HVH21                                   --------------->AGL15                 <---------ANAC46<---------ALFIN1                                 ---------->ID1  <-----------RAV1(1) <---------MYB52(1)  <---------ARR14(2)                <----------DOF2 <-----------GT1  <---------AtMYB61  <-------GAMYB   --------->ANAC58 -DOF2    ---------->DOF2  <----------DOF2 <---------ANAC46        <---------MYB46(3)    --------->ARR14(2)   tcatttagctataaaagcctttttgtatgctttttttctctttttaggtgtatggtggagtgagtctggctgttagcgttgatgtcaagccaaaccgcaa  20150500                           ------>MYB83                           ------>MYB46(1)                       ------->TEIL--------->ALFIN1<-----------GT1                   <---------KAN4(2)  <---------ANAC46                                        <------ ->LBD16 ---------->DOF2   --------->MYB52(1)    <-----------HVH21              <----------DOF2    <- >RAP2.6(2)--------->ICU4<---------MYB59    --------->ZAT6                 <---------ALFIN1  <-------   aatccatttggcaaagatgggaatgaacctaatggaagtggggtttacacttgtcactctctcacccattctatgttccactctttttcttctctcatgt  20150600  Previous    Next  AGI:  At3g54390.1    Description:  transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G05550.2); similar to transcription factor [Arabidopsis thaliana] (TAIR:AT5G05550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42815.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81128.1) Range:  from: 20148719    to: 20150120    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version