Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              <---------At4g35610        --------->TOE1(2)                            --------->At4g35610        ------->GAMYB                     ------>ZmHOX2a(2)                           ----------->RAV1(1)         --------->TOE2(2)                --------->CCA1(2)                         <---------At4g35610          <---------MYB55(2)                <------ZmHOX2a(2)                         --------->At4g35610          --------->MYB46(3)               --------->ARR11(3)             <---------ANAC58                        ------>MYB46(1)                   <---------AGP1             <---------ANAC58     --------->ANAC58   -------->P                        <---------ARR11(3)            --------->MYB52(2)    --------->ANAC58   ------>MYB83                      --------->AGP1    ------>ZmHOX2a(1)    --------->ZAT14           ------->GAMYB                   ---------->DOF2 -------->ARR14(2)    --------->At4g35610       <-----------GT1                 >>>>>>>>>TBF1   <---- ---->RAV1(1)<---------ANAC46     --------->ANAC46--------->MYB46(3)         >>>>>>>>>TBF1      -----   agtttcctcttggtttcttgcattcgctgcagcaaaacgcatcaagaatttaaccaaccagcgaaacacatatcaagaagaagaagaaagatctaagaag  20131700                                                               ------>ZmHOX2a(2)                                                              <------ZmHOX2a(2)                                                              <---------GLK1(1)                                                        ==================HOX2a_HOX2a                                                        ------>ZmHOX2a(2)                                                       ===================HOX2a_HOX2a                                                       --------->CCA1(2)                                                       <------ZmHOX2a(2)                                                      <---------ARR14(2)                                                      --------->AGP1                                                      --------->ARR14(2)                                                      <---------AGP1                                                      <-----------ARR10           ------>MYB83                                                      <---------ARR11(3)          ------>MYB46(1)                                                      --------->ARR11(3)  <---------HSFB2a(2)                                               <------MYB83  <---------ARR11(3)  ----------->RAV1(1)                  --------->ZAT18              <------MYB46(1)--------->GLK1(1) ------->GAMYB               <---------ANAC58               --------->MYB111(1)         --------->HSFB2a(2)      --------->TOE2(3)  <---------ATHB12     --------->MYB59--------->ARR11(3)--------->MYB46(3) ------ID1     <---------ANAC58               --------->MYB46(2)   ------>ZmHOX2a(1)             ---- ------>GT1   --------->ATHB12                <---------------AtSPL8<---------TOE1(2)           -----   gaaaaaaacctcatattgagtggcccaaacatcgacatcagaaatagtttggtacagatctacgatctccttcgttctataaccaacaaaatcaccaaaa  20131800                                                      <---------ANAC46        <---------ZAT6                                                   --------->ALFIN1        --------->ALFIN1          <---------YAB1--------->ANAC58           <---------AtMYB61     <---------ANAC58    <---------MYB46(3)  --------->ANAC58    <---------AHL20(2)           <---------ANAC58    ----------->GT1   ---------->DOF2       --------->AHL20(2)          ------->TEIL ----->DAG2  <---------YAB1           --------->TOE2(3)               <---------SPL7 ----->DOF2--------->YAB1            --------->At4g35610          <---------AtMYB61             -----   aagtagtggttaattataagaaaacaaagcaactcaattagcttaatttaagagtggtgtttagagagatggtgtacgtggtgttagggctgatatactc  20131900                                                                        <---------ANAC58                                                                     <----------DOF2                                                                     ================================                                                                 ------->MYC3                                                           --------->At4g35610   <---------ANAC58                                        <---------At4g35610                =======   <---------ANAC58       <---------YAB1                <---------MYB52(1)                    <------ ------->TEIL           --------->YAB1          --------->ANAC46 <-------MYC3   <-----------GT1 ---->YAB1             <---------YAB1    --------->YAB1<-----------HVH21<---------ANAC58 ------------   atgaagcttgttggagctagagaacatgataatcgaaaccctagcatcacacaaaaccgtgagctcatgtgctttcttgaataaaccatttcttctcttt  20132000       <---------O2       <---------ANAC55(2)       --------->O2       <---------TGA1a       --------->ANAC55(2)                     ------>ZmHOX2a(2)   <-----------TGA1                          <-----------ARR10   <-----------HVH21                         <---------ARR14(2)  <---------ANAC55(2)                        --------->ARR14(2)  --------->ANAC55(2)                        <---------ARR11(3)  --------->ANAC55(1)                        <---------AGP1  --------->ANAC58                           --------->ARR11(3)  --------->ANAC58                          <---------CCA1(2)  --------->ANAC46                       ------>ZmHOX2a(2) <-----------STF1                      <---------AGP1   --------->ANAC58 ================bZIP_DOF         ====================HOX2a_HOX2a ================bZIP_DOF         ------>ZmHOX2a(1)     --------->ANAC46            <----------DOF2 ----DOF2      <---------MYB52(1) ==============HOX2a_HOX2a   <---------GLK1(2)<---------AHL20(2)  -- ----------->TaNAC69(2)       --------->ARR14(2)        --------->ANAC58 <----------DOF2        -----   gaatacgtcacttgtctgtttgtctggttctctatcctcttgatctggatcttccctctcgccatattcttctctctttgtttaatctttttgttgaaga  20132100                                                                                             --------                                                                                             <-------                                                                                             ========                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            =========           <------ZmHOX2a(1)                                                                =========          <----------ID1                                                                    =========       <---------ANAC46                                                                     <--------  <---------ANAC46                                                                          <--------  <------MYB46(1)               ---------->DOF2                                  <---------ALFIN1  <------MYB83            --------->YAB1                                        <---------ZAT18 --------->MYB111(1)  <---------AHL20(2)                                        --------->ZAT18 <---------AtMYB61  --------->CCA1(2)           *TSS                          <---------TCP16(1) ------->CCA1(2)   --------->ARR11(3)          ---------->DOF2                <---------PCF5--------- ------>ARR10      <---------ARR11(3)----------->GT1    --------->CCA1(2)---------->DOF2    <--------   gatttggtggagaggacaagagatataatgagaagaaagaagtgaaatagaaagagagagatggagttgaagaagtaaagggtccacttgagttactaaa  20132200       <------------CBF  ---------->DOF2 ------->AGL15                                                    <---------------AGL15 --------AGL15                                                    --------------->AGL15 =================================================================================MADS_MADS -------->AGL2                                                   ----------------->AGL1 ---------AGL3           ----------->GT1                         ----------------->AG -------->AGL3        ---------->DOF2                          <-----------GT1 ==================================================================================MADS_MADS    ----- =================================MADS_MADS               --------->AHL20(2)                    ----- =================================================================================MADS_MADS     ----- ---------AGL2      --------->AtLEC2                      <---------AHL20(2)        <---------AHL20(2) ---------AGL1    --------------->AGL15                ----------->GT1 <---------TOE2(3)<---------AHL20(2) -------->AG      ================================================================MADS_MADS <-------- ---------AG<---------MYB59<--------P  <---------------------WRI1----------------->AGL3 --------->AHL20(2)   aatggaaagtattgcctaatccatgaaaggtaagttcagaagttgatgaaaactaagtgataaattttccatttatgtaaactgatttttttaattacaa  20132300                                        --------->ANAC58                                        --------->ANAC46                                    <-----------GT1      --------->AHL20(2)  <-------GAMYB --------->ANAC58                            ---------->DOF2      <---------AHL20(2) <---------MYB46(3)                                        --------->AtMYB61 ---->ANAC46   ------->GAMYB     --------->YAB1                 <---------O2    <---------PCF5 ---->ANAC58  --------->MYB46(3) <---------ICU4             <-----------HVH21<-----------------------TaNAC69(2) ---->ANAC58 --------->At4g35610<---------YAB1             --------->YAB1  --------->ALFIN1 ---GT1     --------->MYB52(1)  <---------AHL20(2)    <---------ATHB12 ---------->DOF2   gacactgtttaaatcaacggacatcgatggttgtataattacaagacactgcttaaatcaattgtcacttggtaaaagagggggaccaaagctaaaaact  20132400                                 <---------MYB52(1)                                 --------->DOF5.7(2)                                <-------GAMYB                           <---------GLK1(1)                           <---------At4g35610                           --------->ZAT2                           --------->At4g35610                                           <-----------HVH21                --------->AHL20(2)                                                      --------->ANAC46                <---------AHL20(1)                                            <---------ANAC58      -                <---------AHL20(2)                                            <---------ANAC58      <                --------->AHL20(1) --------->MYB52(2)                    --------->MYB52(1)         <          --------->TOE2(3)<---------ZAT2                             --------->TOE2(3) <----------ID1     <----------DOF2       --------->GLK1(1)                   ----------->HVH21<-------GAMYB   <----     <---------DAG2     ------->GAMYB                         --------->At5g28300     <---------DOF5.7(2)    <---------ANAC58 <-----------GT1<---------At4g35610      ----------->GT1------->GAMYB--------->TOE2(3)    <---------ANAC58 --------->MYB52(1)     <----------DOF2 <---------DEAR3(1)<---------ANAC46 <-----   tggtttgcttttcgtcaatttattaacggagctccgttagcttctactttgtttttgtttagacggtgacaaacttaacggcgtttgtaaacgtcaaatc  20132500              <--------P             <-------GAMYB             <---------ANAC58             <---------ANAC58            <---------MYB46(3)            <------MYB83        <---------ARR14(2)        --------->ARR14(2)    <-------PIF5   <----------DOF2    ------->PIF5  <---------ANAC58 <-----------RAV1(2)   <-----------GT1                                                --------->ANAC58 -------->ZAT14   <---------ANAC58                                                    --------->ANAC58 ---------ZAT14 <------MYB83       ---------->DOF2                                  ---------->DOF2 ---------ZAT18 <------MYB46(1) --------->TOE2(3)                              <---------ZAT6 -----ICU4  <------MYB46(1)     --------->TOE1(3)     <---------AtMYB61 <---------AHL20(2) ----ATHB12<---------AtMYB61  -------->P     ---------->DOF2--------->ZAT18    ----------->GT1      <   agtgcaggtggatttggttggctttttacacttaccctaaagtaaacaaaagtgtttaggtgtgaacaagtttttatattggtgttaaaagccaatattc  20132600  Previous    Next  AGI:  At3g54340.1    Description:  AP3 (APETALA 3); DNA binding / transcription factor. Identical to Floral homeotic protein APETALA 3 (AP3) [Arabidopsis Thaliana] (GB:Q9SQ18;GB:Q9SQ19;GB:Q9SQ20;GB:Q9SQ21;GB:Q9SQ22;GB:Q9SX13); similar to AGL71, transcription factor [Arabidopsis thaliana] (TAIR:AT5G51870.1); similar to apetala3 [Arabidopsis lyrata] (GB:AAF25590.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 20130151    to: 20132148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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