Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->ZAT6       ------>MYB46(1)       -------->P                 <-----------RAV1(2)      ----------->RAV1(1)     ------>NtERF2     --------->AtMYB61     ----------->RAV1(2)      <---------ANAC58                           ------    --------->MYB46(3)   -------->P ----------->GT1 <---------ANAC46                           <-----   >>>>>>>>>>MYB80    <---------MYB52(2)         <XXXXXXXXXXXXXXXXXXXXMIR403     <------ZmHOX2a(1) --WRI1------>MYB83<---------ATHB12--------->LBD16  <---------ANAC58 ----------->GT1 ----------->GT1   tcttaaaccaacactaggctaatcactaaccctgccccaggtaaaacagagtttgtgtgtgtccctaaaaactgaaaatttgaggagaagtcaaaaacct  20123500                                                                     --------->ANAC58                                                                     ------>MYB46(1)                                                             --------->YAB1                     ------>MYB46(1)                         --------->AtMYB61                     --------->MYB52(1)                  --------->MYB46(3)                     ------>MYB83                        ------>ZmHOX2a(2)                   <---------MYB59                 =============HOX2a_HOX2a                   <---------MYB46(2)              ------>ZmHOX2a(1) ------>MYB83 --->TOE2(3) <---------ICU4    <------ZmHOX2a(2)   ----------->RAV1(2)           <----------DOF2 ----MYB59 ----------->RAV1(1) ===========================HOX2a_HOX2a--------->ANAC58   tactcatggaaaacaacattaccaaaccgagcgatcagtctgagtttgacatcctctgatccaccataacctagcaacgtcttctttgccctatcaaatc  20123600                   <----------DOF2              ------>ZmHOX2a(1)             --------->ANAC46   <---------YAB1  <---------DAG2                                                      <---------ARR11(3)  <---------AHL20(2)                                                       <---------TOE2(3)  --------->AHL20(1)                          <-----------GT1              <---------TOE1(3)  <---------AHL20(1)                        <---------GLK1(1)              <---------YAB1      <-----  --------->AHL20(2)      <-----------HVH21<---------GLK1(2)   <-----------GT1         --------->ARR11(3) --------->YAB1 <---------ALFIN1--------->ANAC46              <---------ATHB12         <---------GLK1(2)   ccattataatgtcatcctccactttctctgtcacccataaccatggattttccagttttcccaaatcactcttcgctaagattaccaaagatttttcttc  20123700                                                                ------>MYB83                                                                ------>MYB46(1)                                                               --------->MYB52(1)                                                              --------->TOE1(2)                                                              --------->TOE2(2)                                                             <---------MYB52(2)                                                             <---------MYB55(2)                                                             --------->MYB46(3)                                                             --------->DEAR3(2)                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                       <-----                                                      --------->ARR14(2)                       <-----                                                      <---------ARR14(2)                   <---------MYB52(1)                        --------->LBD16            --------->HSFB2a(2)                  <------------MYB.PH3(1)                     --------->MYB52(1)           <---------LBD16                      <---------At5g28300          <---------ALFIN1                       =============HOX2a_HOX2a             <-----------GT1        ------>ZmHOX2a(1) <---------ZAT18        ==============HOX2a_HOX2a   <---------HSFB2a(2)    <   <----------DOF2  <---------ARR14(2)           ------>ZmHOX2a(1)           --------->HSFB2a(2)  --- ----At4g35610      --------->ARR14(2)           ----------->RAV1(2)         --------->HSFC1(1)<-----   tgcgtctttcctccactctgaagaaccgggcacaagttgaaagttgctatcctctggatccgaaccaacgagaaaccatctagaaatgtaaccgtttgcg  20123800      <----------DOF2    <---------YAB1   <---------ARR11(3)   --------->ARR11(3)                                                           ----------->RAV1(1) ----ANAC58                                                        <---------ARR14(2) ----ANAC58                   <---------YAB1                      <------ZmHOX2a(1) ---------GLK1(2)             <---------AHL20(2)                <---------------------WRI1 -------->ARR10        ------>NtERF2                    --------->ALFIN1     --------->AtLEC2 ----ANAC46           ----------->HVH21              --------->DAG2--------->ARR14(2)              <-   tagattatctttgtattagtactcccgacgtttttattgtgttttttaagaagagaaggtggaacagaggatgctctcaatgcaacattttcaagtcgtt  20123900             --------->ANAC58             --------->ANAC58          --------->TOE1(2)                            --------->At4g35610         --------->ANAC58                              <---------At4g35610               --------->MYB52(1)         --------->ANAC58                           ---------->DOF2                   --------->ANAC58  <---------ANAC46                                <---------AHL20(2)                  --------->ANAC58 --------->ALFIN1                           <------ZmHOX2a(1)     ---------->DOF2     --------->ANAC46 ----------RAV1(1)                 <---------YAB1 --------->AHL20(2)                 --------->LBD16   tatgtggtggaacgtaagacatctctgaaacgaatatatgatactaggaaaattaaaagctgattccaaaaagataactcaagtttccgagcaacgaagt  20124000                                     <---------At4g35610                                     --------->ZAT2                              --------->AHL20(2)                              <---------AHL20(2)                          <---------AHL20(2)                          --------->AHL20(2)                                  <---------ARR14(2)                         --------->AHL20(2)        ---------->DOF2           <------ZmHOX2a(1)  <----                       <----------DOF2           --------->YAB1     --------->TOE2(2)       <--------                --------------->AtSPL8         --------->AtLEC2     --------->TOE1(2)       <------NtERF2                <---------------AtSPL8   --------->MYB59           --------->YAB1      --------->DAG2             ---------->DOF2  --------->YAB1  --------->WOX13(1)  <------ZmHOX2a(2)  ---------->DOF2     >>>>>>>>>TBF1    <---------DAG2 --------->At4g35610          ==================HOX2a_HOX2a -----   atgagaagaagaaacaaaagagtaccttttaattatatcagcttaggtcattcaaaagaagaacgacgatcatacgagaggaaactgaaaaggcgcagag  20124100          --------->ALFIN1      --------->ZAT14      <---------ZAT14   --------->At4g35610        <------MYB83   <---------At4g35610        <------MYB46(1) <---------ZAT14             --------->MYB59                                 --------->AHL20(2) --------->ZAT18             <---------AtMYB61                               <---------AHL20(2) --------->ZAT14     ----------->HVH21                                      --------->AHL20(2) <---------ZAT18   <---------O2                                          --------->ICU4 -----ZAT14        --------->O2          --------->ZAT6                 <---------AHL20(1) --CDC5 <---------ANAC46   <---------MYB52(1)                      <-------TEIL                    <- ---->ZAT14      --------->CCA1(2)<----------DOF2             <---------GLK1(1)        ------------>CBF   cagtgaactgaagtggaagagacgagacggtttggtctttttatcactagaagtttagtcttggaaatgtgcataatatttaatttcatttcaattttca  20124200                                                                           --------->HSFB2a(2)                                                                           <---------HSFB2a(2)                                                              <---------ARR14(2)                 <---------DOF5.7(2)          <-------GAMYB   <-----------ARR10                 --------->MYB52(1)      <---------YAB1       --------->GLK1(2)   --------->AHL20(2)            <---------YAB1              <---------GLK1(2)                  ----- --------ATHB12--------->DOF5.7(2)--------->YAB1 --------->YAB1         <----------DOF2   ------->TEIL   aatcaaaaaataaaaccgataacgaaactcttgttatcatattatgagcgttgataatttagagaatctctgttcttttagaaaattgtatgaacatttt  20124300                                                                                        --------->CCA1(2)                 --------->AHL20(2)                       --------->TOE2(3)           --------->YAB1        <-----------GT1                                 --------->GLK1(2)            <---------YAB1    --------->AHL20(2)                                 <---------GLK1(2)        ------>ZmHOX2a(1)   --------->AHL20(2)                                 <------ZmHOX2a(1)      ---------->ID1        --   <---------AHL20(2)        --------->TOE2(3)      --------->MYB59         <-----------GT1      <--- ------>GT1      <---------AHL20(2)         ------>ZmHOX2a(1)          <---------AHL20(2) <----------   gttaaataaataactatttttaaatgctaaacctcattgtttagtcctaaatgttaggaatcttagtattcatttttttttcctcttatgatatacactt  20124400  Previous    Next  AGI:  At3g54310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70793.1) Range:  from: 20122131    to: 20123922    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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