Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <----------DOF2                                                                  <---------DAG2                                                                 <---------DAG2                                                        --------->YAB1              --------->ANAC58                       <---------CCA1(2)              --------->ANAC58                      ------>ZmHOX2a(1)                              --       --------->YAB1                               =================HOX2a_HOX2a              <------      --------->ICU4                               <---------ANAC58                          --------      <---------YAB1                               --------->TOE2(3)                         -------- ----------->GT1                                   <---------ANAC58    <---------AtLEC2   --------->ZAT2 >RAV1(1)<---------YAB1     <-------TEIL  <---------ATHB12    ------>ZmHOX2a(2)   <---------ICU4   --   gggaagttattatgagaagcaatatgtagattcaatttctcccaatctttcttccttatcttgatccccttttccatgtcttcaacatcaccagcacgac  20095300                                  --------->LBD16                                 <---------------AGL15                                 <---------HSFB2a(2)                                 --------------->AGL15                                 --------->HSFB2a(2)                                 --------->HSFC1(1)                                 <---------HSFC1(1)                                ----------------->AGL2                            ------>MYB46(1)                            ------>MYB83   <---------CCA1(1)   --------->GLK1(1)      <---------MYB59  <---------RVE1(1)                                      --- ------->TOE1(1)          <---------MYB111(1)       --------->ZAT6                               <--- ---ALFIN1                <---------MYB46(2)      ------>ZmHOX2a(1)               --------->ARR11(3) ->ANAC58           --------------->AtSPL8--------->ARR11(3)                      --------->GLK1(2) ->ANAC58           --------->MYB59 ---------->DOF2 --------->REM1(1)             <---------ARR11(3) ------->TOE2(1)    <---------------AtSPL8<---------ARR11(3)               ----------->RAV1(1)   <---   ctcgtatttccctcaaacaattttggtacctacttccagaaagagatatttcctacactaacatgaaacaacaacaacaacaaaaatctttgtaattcga  20095400                                                                                    ---------->DOF2                           ------>ZmHOX2a(2)         <---------ANAC58             --------->YAB1                          <------ZmHOX2a(2)          <---------ANAC58            <------ZmHOX2a(2)---           <---------At4g35610                     ------->TEIL                  =================HOX2a_HOX2a    <---------GLK1(2)    --------->ARR11(3)      <---------ZAT18              --------->LBD16   ----- ------>ATHB12           <---------ARR11(3)      <---------ZAT14           <------ZmHOX2a(2)   ------ ------ATHB51 ---------->DOF2           ---------->DOF2                    =======================HOX2a_HOX2a ------YAB1--------->At4g35610  <---------ANAC46 --------->ZAT18  ----------->RAV1(1)      <------ZmHOX2a(1)   taattggaatctcagcaaaaggagagagatcgtgatgggaaatgaagcgagtgtaccttgccattgagccacattcgatcccgatcaaaagcaggactaa  20095500                                                                          --------->SPL7                                                                      --------------->AtSPL3                                                                    --------->GLK1(2)                --------->ZAT14                                     <---------ARR14(2)         ----------->HVH21                                          --------->ARR14(2)       <---------MYB46(3)                                    <---------LBD16      --------->ALFIN1                                  --------->DOF5.7(2) ----------->RAV1(1)                      --------->ANAC58--------->MYB52(1)--------->TOE2(3)    ---- ---->GAMYB     --------->REM1(2)         --------->ANAC58<---------DOF5.7(2)   <---------CCA1(2)<--- ---->RAP2.6(3) <---------ZAT14 <------ZmHOX2a(2)      --------->TOE1(3)  ------->TEIL<----------DOF2 --->MYB52(1) <---------ZAT14 <------ZmHOX2a(1)        --------->TOE2(3) --------->ARR14(2)--------->LBD16   cggcaacagtggtgactgtgcagagatgatcaggatcaagagttacgctaatgctatcgttaacggggagaatccgaacctcatctctctttccccaata  20095600                                <------NtERF2                               ------>NtERF2                               <-----------TGA1                               <---------ATERF1(1)                               <-----------HVH21                              --------->bZIP60(1)                              --------->RRTF1(2)                              --------->O2                              --------->RRTF1(3)                              <---------bZIP60(1)                                 ------>ZmHOX2a(2)                              --------->RAP2.3(3)                                --------->CCA1(2)                              --------->RAP2.3(2)                                --------->At4g35610                              --------->ATERF1(2)                                <------ZmHOX2a(2)                              --------->DEAR3(1)                                --------->ARR11(3)                              <---------ATERF1(2)                               <---------ARR11(3)                             --------->ORA47(2)                    <---------ARR14(2)  --------->At4g35610                             --------->ERF1                <------NtERF2        --------->ARR14(2)              <-------TEIL   --------->RRTF1(1)           ------>NtERF2         --------->ARR14(3)           <---------HSFB2a(1)--------->bZIP60(2)        --------->DEAR3(1)     --------->AGP1      --------->ANAC46       <------NtERF2               <---------ETT(2)       <---------ARR14(2)     <---------LBD16         --------->RAP2.3(1)       <---------ATERF1(1)     --------->GLK1(1)    <---------At5g28300     ------>NtERF2             --------->ANAC46        ----------->ARR10  --------->MYB46(3)        <---------RAP2.3(1) <---------CCA1(2)  ------->TEIL<---------GLK1(1) ----->ANAC55(2)    <------NtERF2           --------->ANAC58       --------->ARR14(2)  <---------At4g35610 ------ANAC55(2)  <---------DEAR3(1)        --------->ANAC58  --------->O2---------->DOF2   ---------   cttaatcaccgcaatgttcgtcggagtttgcgccgtcaccatgaacacccatttctccgtcgccatgtgaatctccaaaagagatctgcagcttcaaagt  20095700                                    -------->HAHB4                                    --------->YAB1                                    <---------ICU4                                   --------->ICU4                                   <---------YAB1                         ----------->RAV1(1)                        --------->ANAC46                        <----------ID1<---------YAB1                        --------->ANAC58                                 <---------AHL20(2)                     <---------ARR14(2)     <------------CBF        <---------AHL20(2)                     --------->ARR14(2)    --------->ATHB12         <---------YAB1--------->DAG2  ---             --------->MYB52(1)  --------->YAB1                  <---------AHL20(1)      <---------ARR11(3)            ----------->HVH21    <---------ICU4      ------------>CBF <---------AHL20(2) --------->ARR11(3)          *TSS <---------ANAC46 --------->ICU4    <----------DOF2--------->AHL20(1)<------------CBF - ->DOF2 ---------->DOF2 --------->ANAC58   <---------ICU4 --------->YAB1 --------->AHL20(2)  --------   agttgaaaatgaaagcgacggagaatacgacagaataatgatgactcattgcctttacaattttaaaaatattattttattcaaaaattgagaacttcac  20095800                                                                                           --------->ANAC58                                                                                       ----------->GT1                                                                                       <------MYB46(1)                                                                                       <------MYB83                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                      --------->MYB111(1)                                                                                      --------->MYB46(2)                                  <---------YAB1                                     <---------MYB55(1)                             --------------->AGL15                          <---------AHL20(2)  --------->At5g28300       ----------------->AGL1       <---------MYB59    --------->AHL20(2) ----------->GT1          <-----------GT1                --------->TOE1(3)  --------->AHL20(1) ------>MYB52(1)      <---------YAB1               --------->TOE2(3)   <------ZmHOX2a(1)   --------->ANAC58 -------->ZAT6      ----------->GT1        <----------ID1--------->TOE2(3) --------->AHL20(2) ->ZAT14      <---------ATHB12 --------->ICU4 --------->AtMYB61      <---------TOE2(3)--------->MYB59   taactgtaaaactctaatcaaatggttattgccattttgatgaaaacaccaaaacttaacctaaaacgttttaggaaaaaaattgagttaggtaagaaat  20095900                                                                                                   --                                                                                                 ----                                                                                           ----------                                                                                     --------->ZAT2<-                                                                                     <---------At4g35610              --------->ATHB12                                                       <---------ZAT2--              --------->YAB1                                                         --------->At4g35610              <---------ICU4                                                <---------RVE1(1)    ----              -------->ATHB1       <---------YAB1                           <---------CCA1(1)   -----             <---------YAB1    <---------DAG2                     --------->YAB1    --------->MYB52(2)       --------->ANAC58        <----------DOF2           <---------ANAC58  --------->ARR11(3)   <----       --------->ANAC46      ------->TEIL      <----------DOF2 <----------DOF2    <---------MYB52(1)       --------->ANAC58 <---------AtLEC2---------->DOF2  <---------ANAC58  <---------ARR11(3)  <-----   aaccaaaacacgaaaatcattgtgatgcatgaactttatgcttaaaggcctttgagttgtcttgtctttgatattgggatatttgttagctgggaaagga  20096000          <-----------GT1     --------->AHL20(1)     <---------AHL20(1) --------->GT1                                                                                      - ----->GLK1(1)                                                                             <---------YAB1 >DOF2    --------->ANAC46                                                                --------->ARR11(3) --------ANAC55(2)                                                                        <---------ARR11(3) ------->ANAC55(2)         --------->ANAC55(2)                       <---------At4g35610 --------->YAB1 ----->CCA1(2)             --------->ANAC46                      --------->YAB1         <---------TOE2(3) ---->ARR14(2)      <-------TEIL            <---------YAB1      <---------YAB1          <---------YAB1 -----ARR14(2)  <---------ATHB12--------->ZAT6           <---------GLK1(2)              <---------TOE1(3) -ZmHOX2a(1)--------->MYB46(3)<-----------GT1 ----------->GT1<---------YAB1        <---------MYB46(3)   tatgtaatatataaaccactgattcatataagtaacaccattgttcatgagtaaaaacagactcttattatagctcatacagcattggttaagataattg  20096100                                 --------->WRKY18(1)                               --------->LBD16                             <---------LBD16                           <---------ALFIN1                         <-----------HVH21                        ----------->HVH21                       --------->LBD16                      --------->ANAC46                      <---------LBD16            --------->ZAT14                     <---------LBD16             <---------ZAT14                   <---------ARR14(2)         --------->RAP2.6(3)                   --------->ARR11(3)        --------->ATHB12                                 <------                   --------->ARR14(2)       <---------ATHB12            --------->CCA1(2)     -------  --------->ANAC58--------->GLK1(1)  --------->MYB46(3)          <-------TEIL               ------>ZmHOX2a(1)  --------->ANAC58<---------GLK1(1) --------->ANAC58      <---------REM1(1)       <---------ANAC58 --------->DOF2   --------->RVE1(1) --------->ANAC58    --------->At4g35610       <---------ANAC58   aagaaagcatctcattccaaatatccgggacaccgggcaagcaccaatgactgcaatctgatgaaggtccagcgatacgatggtgcttctcttcctcgtg  20096200  Previous    Next  AGI:  At3g54250.1    Description:  mevalonate diphosphate decarboxylase, putative. similar to MVD1 (mevalonate diphosphate decarboxylase 1) [Arabidopsis thaliana] (TAIR:AT2G38700.1); similar to diphosphomevelonate decarboxylase [Hevea brasiliensis] (GB:BAF98285.1); similar to mevalonate disphosphate decarboxylase [Solanum lycopersicum] (GB:ABW87316.1); similar to mevalonate disphosphate decarboxylase [Hevea brasiliensis] (GB:AAL18927.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain Diphosphomevalonate decarboxylase; (InterPro:IPR005935); con Range:  from: 20093277    to: 20095710    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g54260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70127.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 20095988    to: 20097741    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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