Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ANAC58                                                                                     ---------->DOF2                                                     <---------At4g35610        <---------AHL20(2)                                                <-----------GT1          --------->At4g35610                                            <---------YAB1               <---------At4g35610                                           <---------AHL20(1)            --------->ZAT2    --------->ANAC58                                         <---------YAB1                <-----------RAV1(2) --------->ANAC46    --------->O2                     <---------DAG2--------->YAB1   ------->PIF5--------->AHL20(2) ------->ANAC58                 --------->TOE2(3)<-----------GT1    <-------PIF5--------->AHL20(1) ------->ANAC58           <---------At4g35610 <---------AHL20(2)   --------->ANAC46 <---------AHL20(2) ------>DOF2           <---------At5g28300 <---------AHL20(2)    <---------ALFIN1   <---------ICU4 -DOF2         <---------AHL20(2)    <----------DOF2 --------->At4g35610 <---------ZAT2   ------->TEIL   aaagccatgtgaagtatttgatttctaccgctaacctcactttattatttttatcatctcccttcttccacgtccagctgaattaattaatgcacgtctt  20076200                                                                 -------->P                                                                ------->GAMYB                                                               <---------MYB55(2)                                                               <---------MYB111(2)                                                           --------->MYB46(3)                                                           <---------MYB52(2)                                                          <---------At4g35610                <-----------HVH21 <---------ICU4   <---------AHL20(2)               ----------->GT1    --------->YAB1  <---------AHL20(1)         <---------AHL20(2)      <---------ATHB12 --------->AHL20(2)    <---------YAB1           ----        --------->AHL20(2)     --------->WOX13(1) <---------AHL20(2)   --------->AHL20(2)      <-----       <---------YAB1  --------->TOE2(3)       --------->YAB1--------->MYB52(1)  <---------At4g35610    <---------YAB1   <-----------ARR10        <---------YAB1------->GAMYB   ---------->DOF2--------->ANAC46    --------->ICU4<---------WRKY38(1)        --------->AHL20(2)--------->MYB46(3)--------->At4g35610   --------->TOE2(3)<---------CCA1(2)        <---------AHL20(2)<---------MYB111(1)     <----------DOF2   cgaaacattattaaaaatggtcaaatctcaactcaatcaataccgattttaataaaattcaactaacaaccatttttataaagagctgtctttacgacgt  20076300                                                                                                    -                                         <---------AHL20(2)                                --------->AHL20(2)                                         <---------AHL20(1)         ------->TEIL           <---------AHL20(2)          <---------YAB1             <---------AHL20(2) <---------ANAC55(2)                --------->AHL20(1)    ------->TEIL        <----------DOF2  --------->AHL20(2)      <---------YAB1           <---------AHL20(2) ----->SPL7  ------->TEIL   <-----------GT1    <-----------GT1<---------AHL20(2)          --------->AHL20(2) ----SPL7 <---------ANAC55(2)    <---------MYB52(1)     --------->ANAC55(2)    ----------->GT1   <---   tcgacgaacattatgtatgttttatacttttatccgtttttattttatttttctaaatacttattttatgaatttagaagtgtgttacaaaattaaattg  20076400                                                                              --------->ICU4                                                                    --------->YAB1                                                                   <---------YAB1                                                                <---------AHL20(2)                                                                --------->AHL20(2)                   --------->ANAC46                         --------------->AGL15   <---------------AGL15                                    <---------------AGL15   --------------->AGL15                                   ----------------->AGL3  ----------------->AGL2                                   ----------------->AGL1                <---  ==========================================================================MADS_MADS            ----  ----------------->AGL3                            <---------GLK1(2)    ----------->GT1  <---------- -------->GLK1(2)--------->ANAC46         <-----------ARR10<-----------------AGL1        --------->AHL20(2) ------TOE2(3)  <-------TEIL             <---------CCA1(2) ----------------->AG       --------->WOX13(1)   agattccatttacagacatacaccaaaaaaaaaaaaaaaactagtatctcatcaaattcttcccaatttatgaaaatgtaattttcatcaattaactatt  20076500                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                         --------->YAB1                                                        <---------YAB1                                                      -------->ATHB1                                                     --------->AHL20(2)               <---------AHL20(2)                                       ----------->GT1<---------ICU4                  --------->AHL20(2)                                   --------->AHL20(2)<---------ATHB51             --------->AHL20(2) ------AHL20(2)                    <---------AHL20(2)<---------AHL20(2)         ----------->GT1 ----->AHL20(2)           --------->ANAC58           --------->ICU4             --------->ANAC55(2) -GT1 --------->AHL20(2)  --------->ANAC58     <-----------GT1                  <---------ANAC55(2)   tttttaaaaaatatactcgtggaaaatcaagaaatattaaaatgtaaaataacaaattattaaaatgaaatgtgtttgagtcatgtaattaaaaactggt  20076600      --------->LBD16    <---------LBD16  --------->ARR14(2)                       *TSS     --------->LBD16                      ---------->DOF2  <---------ARR14(2)         <----------DOF2      ----------->RAV1(2)      --------->MYB46(3)       -  --------->GLK1(2)       ------>ZmHOX2a(1)--------->AtMYB61     ------->GAMYB ---------->DOF2 ------  ------->TEIL     <---------ZAT18  <------ZmHOX2a(1)         --------->MYB52(1)   ----------->GT1---   aacgaatccgcgtacaaatagtggtctcctcctttataggataaaccaaaacccctgagaaactcaacagcgagagaaccacaaagcgtaacaaagagag  20076700                                                                                      ------>MYB83                                                                                      ------>MYB46(1)                                                                                      --------->MYB52(1)                                                                                     --------->MYB55(1)                                                                             --------->ANAC46                                                             ------->GAMYB   --------->ANAC58                                                            --------->MYB46(3)--------->MYB46(3)                                                          ----------->RAV1(1)------>MYB83                                                        <------NtERF2        ------>MYB46(1)                                                        --------->At4g35610  --------->ANAC58                                                       --------->ANAC58    --------->AtMYB61      <---------YAB1            --------->YAB1         --------->ANAC46    <---------ALFIN1 <---------ICU4                <---------YAB1      --------->ANAC58        --------->DEAR3(1) -------->ICU4        --------->YAB1               --------->ANAC58       --------->MYB46(3)       -- ----->GT1           <---------ATHB12          <------ZmHOX2a(1)     <-----------GT1--------->AtMYB61 ------>YAB1       --------->WOX13(1)---------->DOF2   --------->ANAC58--------->MYB46(3)        <---   taataactatgagtgatttttcaatcaaacccgatgataaaaaggaagaggagaagccagcaacagccatgttaccaccacccaaaccaaacgcttcttc  20076800                                                     --------->At4g35610                                                     <---------At4g35610                                                    --------->MYB52(1)                                                 --------->ANAC46                                                 --------->ANAC58                                                 --------->ANAC58                                               ---------->DOF2                                              <---------ARR14(2)                                              --------->ARR14(2)                                             <------NtERF2                                          <------NtERF2                                         <---------RAP2.3(1)                                         ------>NtERF2                                         <---------RRTF1(1)                                        <---------DEAR3(1)                          --------->MYB46(3)--------->LBD16        --------->ARR14(2)             --------->At4g35610        <---------RRTF1(2)         <---------ARR14(2)         --------->ARR14(2) ----------->GT1<---------ANAC46        ------->TEIL     --------->ANAC58   --------->ARR14(2)<---------LBD16         <---------CCA1(2)     --------->ANAC58   <---------ARR14(2)------>NtERF2      <---------ARR14(2)     --------->ANAC46 --------->LBD16   <---------RAP2.3(2)  --------->ARR14(2)  --------->ARR14(2)<---------LBD16     <---------RRTF1(3)   --------->GLK1(2)        <---------YAB1 ------->AtLEC2    --------->MYB52(1)  <---------LBD16 ------->GAMYB       <-----------GT1     ------ ------AtLEC2<---------At4g35610      <-----------RAV1(1)    <---------ARR11(3)    ------>ZmHOX2a(1)   catggaaacgcaatctgctaacaccggaaccgctaaaaaactgcggcggaaacgcaactgcaaaatctgtatctgtttcactatccttctcattctccta  20076900                                                                                 ------>ZmHOX2a(2)                                                                                 ====================                                                                                 ====================                                                                             --------->WRKY38(1)    -                                                                             --------->WRKY12       <                                                                            <---------MYB52(1)     --                                                                     <-----------HVH21           <---                                                    <---------MYB111(1)    <-------GAMYB        <----                                                    --------->MYB46(3)----------->HVH21         -----                                               --------->ANAC46      <-----------TGA1     <---------HSFC1(2)                       <----------DOF2       --------->ANAC58       <---------ANAC58      --------->HSFC1(2)                <---------At4g35610          --------->ANAC58       --------->ANAC46      --------->ZAT2                --------->At4g35610        ---------->DOF2          <---------ANAC58      --------->HSFB2a(1)           --------->YAB1               --------->AtMYB61           --------->ANAC55(2)   <---------ZAT2 >ZmHOX2a(1)<-----------TGA1          >>>>>>>>>>MYB80               <---------ANAC55(2)xxxxxxxxxxxxxx   atcgccatagttatcgtcatcttagctttcactctcttcaaaccaaaacgcccaactactacaatcgattccgtcaccgttgatcgtctccaagcttccg  20077000            --------->HSFB2a(2)         ------>ZmHOX2a(1)                                                                        <--    ------>ZmHOX2a(1)                <---------WRKY38(1)                                         ---- XXXXXXXXXXXXXXXXXXXX>MIR847      ------->GAMYB                                                  <--- ===============HOX2a_HOX2a    ------>MYB83                                                     <---- ==========HOX2a_HOX2a         --------->MYB52(1)                                              <----- -------->ARR14(2)            --------->MYB55(1)                    --------->ANAC46           ------ ---------ARR14(2)      ------>ZmHOX2a(1)                           ------->GAMYB             <------ ------->WOX13(1)       ==============================HOX2a_HOX2a<---------ARR14(2)           <------ ------MYB52(1)      =================================HOX2a_HOX2a--------->MYB52(1)          <------- -------HVH21 ---------->DOF2<---------MYB59                  --------->TOE2(3)          <-------TEIL ---->LBD16 <---------HSFB2a(2)------>MYB46(1)                --------->TOE1(3)  <---------At4g35610< xxxxxx>smallRNA(se3)------>ZmHOX2a(1)         ------>ZmHOX2a(2) --------->ARR14(2)  <---------YAB1<-   tcaatcctctccttctcaaagtcctcctaaacctaacgctcaacgtcgatctctctctcaaaaaccctaaccgcatcgggtttagctacgattcgtcgtc  20077100  Previous    Next  AGI:  At3g54200.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G05975.1); similar to Harpin-induced 1 [Medicago truncatula] (GB:ABE93043.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 20076643    to: 20077538    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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