Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->AHL20(2)                             ----------->RAV1(1)                        ---------->DOF2                                                            --                      --------->YAB1                                                            -----      <---------At4g35610 --------->ANAC58                                        ---------->DOF2  <-      --------->At4g35610 --------->ANAC58                                   --------->YAB1     <---- ------->ZAT6        <---------ATHB12        --------->TOE2(3)       ----------->RAV1(1)        <---- --------GT1       --------->WOX13(1)        --------->TOE1(3)      --------->MYB46(3)  <----------DOF2   atcacttcagcataaacacagcaatcaaaagcaccataaaatcgaaaccctaattttgcctaaacttccaacaacacaataacaaaaaggctttacaata  20055100                                                                     --------->DEAR3(1)                                                                    <------NtERF2                                                                    --------->ATERF1(1)                                                                    <----------CDC5                                                                   ------>NtERF2                                                                   --------->ABI4(1)                                                                   <---------ATERF1(1)                                                                  --------->DEAR3(1)                                                                  <---------ATERF1(2)                                                                  --------->ATERF1(2)                                                                  <---------DEAR3(1)                                                                  --------->RAP2.3(2)                                                       ----------->GT1------>NtERF2                                                     --------->ARR14(2)                                                     <---------ARR14(2)                                                 <---------LBD16  --------->RAP2.3(3)                                               ------->TEIL      --------->RAP2.3(1)  <---------TOE2(3)                         <---------ANAC58     --------->ATERF1(1) ------->AHL20(2)                           <---------ANAC58     --------->DEAR4(2) ---->AHL20(1)                       --------->HSFB2a(2)         --------->ORA47(2) --------AHL20(2)        <-----------GT1   --------------->AtSPL3--------->ERF1 -----ARR11(3)       --------->ARR11(3)  <---------ARR14(2)     <---------ATERF1(1)            ------ -----AHL20(1)       <---------ARR11(3)  --------->ARR14(2)---------->DOF2                     <-----   tataaatgttgaatgcaactcaagatttatcaatttcatcgcgaattcgtacctggatactaaaatcgccgccgagggaaacattgtgcgactcttcagc  20055200                                                                                     --------->At4g35610                                                                                    --------->RAP2.6(2)                                                                                  --------->At4g35610                                                                                  <------NtERF2                                                                                  <---------At4g35610                                                                                  --------->ATERF1(1)                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                <---------DEAR3(1)                                                                                <---------ATERF1(2)                                                                                --------->ANAC58                                                                                --------->O2                                                                                --------->ANAC58                                                                                --------->ATERF1(2)                                                                                <---------bZIP60(1)                                                                               --------->ATERF1(1)                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              <---------ATERF1(1)                                                                             --------->DEAR3(1)                                                                             <---------DEAR3(1)                                                                             ----------->HVH21                                                                            --------->ATERF1(1)                                                                            --------->RAP2.3(1)                                                                            <------NtERF2                                                                           <---------ORA47(2)                                                                           <---------ATERF1(1)                                                                           ------>NtERF2                                                                           <---------RAP2.6(1)                                                                           <---------RRTF1(1)                                                                           <---------RAP2.3(1)                                                                           <---------DEAR4(2)                                                                          <---------DEAR3(1)                                                                          --------->DEAR3(1)                                                                          <---------ATERF1(2)                                                                          <---------RAP2.3(2)                                                                          <---------RAP2.3(3)                               <------NtERF2                              --------->ATERF1(2)                               <---------At4g35610                       <---------ABI4(1)                               --------->At4g35610                       <---------LBD16                               <---------ZAT2                            --------->ATERF1(1)             --------->At4g35610<---------ALFIN1                       <---------DEAR3(1)          <------NtERF2       <---------ATERF1(1)----------->HVH21     ------>ZmHOX2a(2)         ------>NtERF2     ------->GAMYB       ----------->RAV1(2)   <---------ARR14(2)         --------->LBD16  --------->ANAC46   --------->ARR14(2)      --------->ARR14(2)        <---------LBD16   --------->MYB46(3) <---------ARR14(2)   --------->HSFB2a(2)<---------At4g35610       <---------LBD16  --------->MYB52(1)--------->YAB1          <---------HSFB2a(2)<------NtERF2 --->At4g35610   <---------ARR14(2)     --------->ANAC58  ====================HOX2a_HOX2a ----At4g35610   --------->ARR14(2)     --------->ANAC58  ------>ZmHOX2a(1)<---------ERF1   taagaaatcgccgggagcaaaacctccaacggcagcaccttcaagcataacctgacgctccttcccgtctagatcggcggcgacggcagccaaatcgaat  20055300                                                  <---------ARR14(2)                                                  <---------GLK1(2)                                            ------>NtERF2                                            --------->ZAT14                                            <---------ZAT18                                        --------->ANAC46                                        <---------DEAR3(1)                                      <----                                       --------->SPL7                                           -----                                     --------->ZAT14                                       <---------                                     <---------ZAT14                                      <---------ANAC58                                  <------------------SPL14                                <---------ANAC46                               --------->ANAC46   --------->ARR14(2)                      <---------ANAC58                            ----------->HVH21   ----------->ARR10                      <---------MYB52(1)                          --------->REM1(2) --------->ZAT18                           XXXXXXXXXXXXXXX                    <---------ALFIN1 <---------SPL7                                   <-------GAMYB      ---------->DOF2    --------->ALFIN1   <---------ZAT14    ------->TEIL        ------>ZmHOX2a(1)   tcagagaagaaaggcccttgcaacaccgtgttgacgcagtgtacggcgcacagatttgactcttgaacctcgtgatacaacattcctccgttgcttgttc  20055400                                                          --------->ATHB51                                                          --------->ATHB12                                                          <---------ICU4                                                         <---------YAB1                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                      <---------YAB1                                                   <---------AHL20(1)             <---------YAB1                        <---------ARR11(3)    --------->DEAR3(1)                             --------->ARR11(3) -----MYB46(3)                                     <---------AHL20(2) ---->MYB52(2)           --------->YAB1            --------->AHL20(2)            ---------->DOF2 -DOF2       <---------TOE2(3)  <-----------GT1    --------->AHL20(1)    ---------->DOF2 XXXXX>MIR837-5P--------->CCA1(2)                ------->TEIL      --------->At4g35610   gttccatcgccgattaagatttgaatatcaaaattcactgattttgcgatgaatatattattattgctccgatgcaaaagtctcaaagagattgtgaagc  20055500                                                                                        ------------>CBF                                                                                 --------->AHL20(2)                                                                               ----------->GT1                                 --------->ANAC58   --------->AHL20(2)        --------->DAG2                                 --------->ANAC58   <---------AHL20(2)       ========================                             >>>>>>>>>TBF1      --------->AHL20(2)           ---------->DOF2      <--                          >>>>>>>>>TBF1       <---------GLK1(2)          --------->ANAC58     =======    *TSS           ---------->DOF2       --------->MYB52(1)              --------->ANAC58     -------   gaagatgaagatgaagatgaagaaagaagaagaagaagcaagttaacagattatttaaataagaaaatgtaagggacggaaaagtaaatatacaataaaa  20055600                ------->GAMYB               <------------MYB.PH3(1)             <-----------GT1       ----------->GT1      <-------MYC2      <-------MYC3      ------->MYC3      ------->MYC2      <-------PIF5      ------->MYC4      <-------MYC4      ------->PIF5     =======================MYC_MYB     ===================MYC_MYB     ==========================bZIP_DOF     <---------TGA1a     ==========================bZIP_DOF     --------->O2     <--------ABF1------>MYB83     --------->TGA1a<----------DOF2     <---------ANAC46     <---------ANAC55(2)      <----------DOF2     <---------O2 ------>MYB46(1) ==============bZIP_DOF --------->HSFB2a(2)                           --------->CCA1(2) ----ZmHOX2a(1)--------->DEAR3(2)                                  <---------TOE2(3) ==============bZIP_DOF <---------HSFB2a(2)             <---------ARR14(2)        --------->TOE2(3) - --->DOF2    --------->MYB52(1)                         --------->ARR14(2)      <---------ARR11(3)  -   ggatgccacgtgtaataaccgactttctaggcctttttcttattttgcagacgagcccgatactgttttgagataggcccattatctcaaaattgacaga  20055700                                                                                                 <---                                                                                <------MYB46(1)  ----              <---------ANAC58                                                  <------MYB83     ----          <---------ANAC58                                                     <---------AtMYB61 <---          <---------ANAC58            <----------DOF2                         <--------P         <---         --------->MYB52(2)        ------>ZmHOX2a(2)                         <---------MYB52(1)  <---    <---------TOE1(2)            <---------ARR11(3)                       ------>ZmHOX2a(2)  <-------    <---------TOE2(3)   <---------GLK1(1)                       <---------ANAC46<---------MYB46(3)    <---------TOE2(2)   --------->GLK1(1)             --------->YAB1   --------->ATHB12      ========    --------->MYB59    --------->ARR11(3)      ------>NtERF2 ----------->HVH21======================= ----->MYB83  <---------ANAC58   --------->ARR11(3)  <---------YAB1   <---------YAB1    <---------ANAC58 ----->MYB46(1)        <---------ARR11(3)     <---------RAP2.6(2)    <---------KAN4(2)  <---------ANAC58   ccaacttaggttccttgcttcccaagatttctggtgatctctttgatggcgacttctgataatgtgatgggtatgatcgggttggtttatgcctgcattt  20055800        --------->ANAC58        <---------TGA1a        --------->O2        --------->ANAC58        --------->ANAC46        --------->bZIP60(2)        <---------O2      <---------ALFIN1   <---------ICU4   <-----------GT1 ------ANAC46 ------->GT1 ----->ANAC55(2) <---------ZAT18                                                  <---------TOE2(3) ------ANAC58    <---------ZAT14                                        <---------ZAT14 ------ANAC58    --------->ZAT14                    <---------ZAT14     --------->REM1(2) ------ANAC55(2) --------->ZAT18                    --------->ZAT14     --------->ZAT14 ---DOF2--------->TGA1a                --------->YAB1                 --------->LBD16               - =================bZIP_DOF         <------ZmHOX2a(1)--------->ZAT18  <---------ANAC58               < =================MYC_MYB        --------->MYB59    <---------ZAT18  <---------ANAC58             ---   cgtaataaccacgtctgagagcactaatacagagttaggaattatactactgagagcactagcagcaatgtccgtgaacagtttaagaatttagataagt  20055900                        <---------ANAC46       <---------GLK1(2)          ---------->DOF2             --------->ANAC46         <---------AHL20(2)      <----------DOF2 ---------->HVH21    --------->GLK1(2)--------->ANAC58      ----------->GT1                         < ---------ZAT6      <---------GLK1(2) --------->ANAC58     <---------TOE2(3)            <---------MYB46(3) ------>MYB52(2)  ----------->ARR10 <-----------GT1   --------->YAB1                  <---------MYB52(1)   tagtgacagatttaaagaatgagattctgtataagcttttacgccctctgattctttcatcaaggtaatacatctactacttctacctgtttgttctaaa  20056000  Previous    Next  AGI:  At3g54130.1    Description:  josephin family protein. Identical to Ataxin-3 homolog [Arabidopsis Thaliana] (GB:Q9M391;GB:Q53XG9); similar to JOSL (JOSEPHIN-LIKE PROTEIN) [Arabidopsis thaliana] (TAIR:AT2G29640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15770.1); contains InterPro domain Machado-Joseph disease protein MJD (InterPro:IPR006155) Range:  from: 20053683    to: 20055504    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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