Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ANAC58                         --------->ANAC58                         --------->ANAC46                       <---------ALFIN1                      <-------TEIL                      <---------REM1(2)          <---------At4g35610         --------->MYB46(3)                      --------->ZAT14            --------->At4g35610       --------->MYB52(1)                  --------->ANAC46          <---------ZAT14    --------->At4g35610        <---------- -->LBD16     <----------DOF2               --------->ZAT14    <---------At4g35610  --------->ZAT18<-   attccattagcaatggctctacggtacacgctaggcttcttctctctactctgcttcgacaattcatcagcccgttccaacggatgcacactggtcacag  19932900       <---------At4g35610       --------->At4g35610       --------->ZAT2                                                                           ----- ------>MYB46(1)                                                          <---------DAG2      ------- ------>MYB83    <---------ANAC58             <---------HSFB2a(2)       ------->TEIL          ------- -HVH21<---------ZAT2                         --------->HSFB2a(2)       -------->P        --------->AtLEC2 --------MYB59   <---------ANAC58--------->MYB52(1)        --------->TOE1(3)     <------ZmHOX2a(2)   acctaatccagctcaaattgcgagacttcttcgcaaaccggtcgagttctcgatagtagaaccctaacttgatcaacctttcgatcaagtccctgcaagg  19933000                                                        --------->At4g35610                                               <------ZmHOX2a(2)                                              <---------ARR11(3)                                              --------->ARR14(2)                                              <---------ARR14(2)                                    <                                              <-----------HVH21                                    --                                ------>NtERF2 <-----------ARR10                                    <-                               --------->RAP2.6(2)      <---------At4g35610                       >>> ----->DOF2                  <---------At4g35610        <---------ZAT2                           <--- -->ANAC58                   --------->At4g35610  --------->At4g35610<---------DAG2            <----- -->ANAC58           --------->YAB1     <-----------GT1 --------->ZAT2                    <------ZmHOX2a(1)   aagcgcatcagagtcactagaaatcaaaatcagcggccaaatttaccagatcagcgcgagcagagactaaacctttcgctgggttcgatgaaggagatgt  19933100                           ---------->DOF2                       <---------At4g35610                               <---------ANAC58           -                ------->TEIL                                             <---------ANAC58          <- ------ZmHOX2a(1)      --------->At4g35610                            <---------MYB52(1)          <-- ------->At4g35610   --------->YAB1                                  <-------GAMYB                <-- --------At4g35610  <-------TEIL                          --------->STY1(1)  --------->ANAC58   ----- >>>>GRF7   <---------------AtSPL8                        <---------STY1(1)  --------->ANAC58  <----- --------RAV1(2)<-------TEIL    ----------->GT1        ------>NtERF2<---------ANAC58<---------DEAR3(1) ------HVH21--------------->AtSPL8             ---------->DOF2      <---------ANAC58--------->DEAR3(1)   caggagcgagtttgaatgtacattcatcagaaagaggtgaatcggagttgaaagcgaggcctagggttttccgttgctcacgctcgtcgacgatgagatc  19933200                                                            --------->ARR14(2)                                    --------->ATHB12        <---------ARR14(2)                                  ----------->RAV1(1)    --------->ANAC58           ----------->GT1  ----------->HVH21              ----------------->AGL1  --------->ANAC46     <---------LBD16 -------->LBD16               <-------MYC2               --------->ANAC58 <---------AHL20(2) --------DEAR3(1)             <-------MYC3          ---------->DOF2    --------->AHL20(1) -------LBD16                 ------->PIF5        --------->ANAC46     <---------AHL20(1) -------------------WRI1      <-------PIF5        --------->ANAC58     <---------ARR11(3) ->ZmHOX2a(2)                 ------->MYC2        --------->ANAC58     --------->ARR11(3)       ----- -ZmHOX2a(2)                  ------->MYC3  --------->GLK1(1)         <---------AHL20(2)   ----------   gccggtgaagcctaagagagctagaagaagctcgtgcaacattgggaaattcacgaaagacgaaactgctaaatattttttgggggagggaaattgaaaa  19933300                   --------->LBD16                  --------->DEAR3(1)                 --------->ATERF1(1)                 <---------LBD16                 <------NtERF2                <---------RAP2.3(1)                ------>NtERF2               --------->ETT(2)               <---------ETT(2)               <---------DEAR3(1)            <-----------RAV1(1)        <------NtERF2        <---------MYB52(1)       <-----------HVH21       <---------RAP2.6(3)       ------>NtERF2       <-----------TGA1                     --------->ZAT14      <---------ANAC58                 --------->ZAT14      <---------ATERF1(2)              <---------ZAT14      --------->bZIP60(1)   <---------MYB46(3)      <---------ANAC58      <------MYB46(1) <---------ZAT14      <---------bZIP60(1)   <------MYB83   *TSS ---->GLK1(2)<-----------HVH21    <---------LBD16         ----------->GT1 ->GT1--------->RAP2.6(2) <--------P  --------->ALFIN1  ----------->GT1      ---------->DOF2   tccaaatgccgtcactgtcgccggacttgttggtttaccggtgtagttcagtggcaaatggtgtaatttcatgagaaaacaaaggtgttttgctaattta  19933400                                ---------->DOF2                          <---------ALFIN1                         --------->ZAT18                         <---------WRKY38(1)                         <---------WRKY12                         <---------ZAT18                       <---------ATHB12                        --------->TCP16(2)                     --------->MYB46(3)                       <---------PCF5                         --------->ANAC46                       <---------ARR14(2)                    --------->WOX13(1)                       --------->ARR14(2)           <------MYB83--------->YAB1               --------                       --------->PCF2               <------MYB46(1)                       ------>MYB46(1)                       <---------TCP20             --------->MYB59                        ------>MYB83                       <---------TCP11(2)          <---------AtMYB61                    --------->AtMYB61                   <---------LBD16      <----------DOF2 <----------DOF2                 <---------MYB59      <----------DOF2  <---------TCP16(1)        <---------MYB52(1)              ----------->GT1   gagagtctctttttctcttgtctcgggtccactcgaaagaccctttattcggtttggtctttccaatcaacaccaattcgatatggttaaccaaaccaaa  19933500                                                                                                    -                                                                                                    -                                                                                                   --                                                                                                  ---                                            <---------ARR14(2)                       <---------ANAC58                                            --------->ARR14(2)                       <---------ANAC58          --------->GLK1(2)              --------->AHL20(2)                    ------>MYB83      <---          --------->ARR14(2)             <---------AHL20(2)                    ------>MYB46(1)------- ->AtMYB61<---------ARR14(2)        --------->AHL20(2)                       <---------MYB59<--------   actctatctaaaaatccgatatgaaaccgaattagagaaaaaataaaatccgactatgttttaagaaccgtagtcgaaaccaaacttgctcgtgtaacca  19933600           <------NtERF2         --------->ANAC46        <---------LBD16      ------>NtERF2     --------->DEAR3(1)     <---------ALFIN1   <-----------HVH21  ------->GAMYB  --------->ANAC46 --------->MYB46(3)                   >>>>>>>>>>WRKY26 <------------AtMYB77                 >>>>>>>>>>WRKY38 --------->DEAR3(2)                   <---------WRKY18(1) ------->P--------->LBD16             >>>>>>>>>>WRKY43 -------->MYB52(1)                   ----------->HVH21             <---------At4g35610 ------->MYB52(1)                  --------->ANAC55(2)            <---------TOE1(3) -------->HVH21    ----------->GT1 <---------ANAC58          --------->MYB46(2) ------MYB52(2)  ----------->GT1   <---------ANAC58          --------->MYB111(2) -->MYB46(3)    --------->ALFIN1 <-----------GT1         <---------TOE2(3)                       <--- ---GT1<---------ATERF1(1)       <---------AHL20(2)    ---------->DOF2      --------->ATHB12<--------   ctaaccggcacccggcaagtggagaaaaaaacaatttacttgaccaattgtagggaacaaaggtagttaagctaagcttgattaagtcaaaattcttttt  19933700                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                      --------->ANAC58           <---------ATHB51                                         <---------YAB1               <---------WRKY18(1)                                         <---------AHL20(2)          --------->WRKY38(1)    <--------                                      <---------AHL20(2)             --------->WRKY12   <---------At5g28300                                      <---------AHL20(1)             ----------->HVH21 <-----------GT1                                      --------->AHL20(1)          --------->ATHB12--------->AHL20(1)                                     --------->AHL20(2)      --------->ARR11(3)  --------->AHL20(2)  --------->REM1(1)                  <---------AHL20(2)      <---------ARR11(3)  <---------ATHB12  <---------ALFIN1           <---------YAB1           --------->ANAC58<-----------GT1 --------->WRKY12 --------GT1            --------->YAB1--------->AHL20(2)   --------->ICU4        <---------AHL20(2) --DOF2           ----------->RAV1(1)--------->YAB1 ---------->DOF2 <---------WOX13(1)----------->HVH21   tgctacacttctagttgagccaacaaaaatgatgctaaattatattattcgaagaaaagccattatctcgattgacccttcaaataatttgaccgttcag  19933800  Previous    Next  AGI:  At3g53760.1    Description:  tubulin family protein. Identical to Gamma-tubulin complex component 4 homolog [Arabidopsis Thaliana] (GB:Q9M350;GB:Q6NLC2); similar to SPC98 (SPINDLE POLE BODY COMPONENT 98) [Arabidopsis thaliana] (TAIR:AT5G06680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40031.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68024.1); similar to Gamma-tubulin complex component 4 homolog (GB:Q9SC88); contains InterPro domain Spc97/Spc98; (InterPro:IPR007259) Range:  from: 19928832    to: 19933343    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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