Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <---------TOE2(3)          ---------->DOF2                                                  --------->GLK1(1)         --------->AHL20(2)                                                <---------GLK1(1)         <---------AHL20(2)                                          --------->ARR14(2)  --------->AHL20(2)                                                 --------->GLK1(2) --------->GT1                    <-----------GT1                    <---------ARR14(2) -------YAB1               <----------DOF2   --------->YAB1     <-----------GT1       --------->At4g35610   atgattaaaaattaaagttgaagacaattctttttttttcaattcattcatcgtttaactgagaaattacaaatctgaaatccctagatgctgaaattga  19923600                                                 --------->AtLEC2                                            <---------ARR11(1)                                            --------->GLK1(2)                                            <---------ARR14(2)                                         --------->DEAR3(1)                                        --------->RAP2.3(1)                                        <------NtERF2                                       ------>NtERF2                                       --------->LBD16                                       <---------ATERF1(1)                                       --------->At4g35610                                      --------->RAP2.6(2)                                        ----                                      --------->DEAR3(1)                                        -----                                      --------->RAP2.3(2)                                    --------                                     --------->MYB46(3)           <---------CCA1(2)      <-------TEIL                                     --------->ATERF1(1)       ------>ZmHOX2a(1)   --------->ANAC46             --------->LBD16         --------->ERF1 ---------->DOF2              <---------DOF5.7(2)         --------->GLK1(2)          <---------At4g35610       <---------ANAC58  --------->ARR14(2)         <---------ARR14(2)         --------->At4g35610  <-------TEIL           <---------ARR14(2)         --------->ARR14(2) --------->SPL7  --------->ARR14(2)<---------ANAC58 --------->DOF5.7(2)---   agagtttacaaaatccgaaattgcaatccgaacgatttagccgccgaatccatacaaagttcgtccttgtctcttgagagcgtaaacgacgtccatcgcc  19923700                                          --------->ANAC55(2)                                      <-----------HVH21                  --------->ANAC58                                      <-----------TGA1           ------>ZmHOX2a(2)                                      ------>NtERF2             <------ZmHOX2a(2)                                     --------->bZIP60(1)       --------->ARR14(3)                              <---------MYB52(2)               <---------ARR14(3)                       <---------ANAC58   --------->ANAC58     --------->ARR11(3)                       --------------------->WRI1              <---------AGP1--------->LBD16                   <---------ZAT2    <---------bZIP60(1)       --------->AGP1<------NtERF2          ------>NtERF2<---------ANAC58   --------->ANAC58     <---------ARR11(3)          --------->LBD16    --------->ANAC58                  --------->ARR14(2)         <---------LBD16     --------->ANAC58                  <---------ARR14(2)        <---------LBD16<---------ANAC46   <---------ANAC55(2)----------->ARR10 <------------MYB.PH3(1)--------->LBD16<------NtERF2       ---------->DOF2   ------>NtERF2 ----->At5g28300 --------->ZAT18     --------->bZIP60(2)<---------HSFB2a(2) --------->DEAR3(1) ---->ANAC46     <---------ZAT18   ------->GAMYB        --------->HSFB2a(2)<---------LBD16         -- ->DEAR3(1)     <---------ANAC58 <---------At5g28300  <---------HSFB2a(2)--------->ANAC46     ======= -------->HVH21 <---------ANAC58--------->MYB52(1)    --------->HSFB2a(2)--------->ANAC58     <------ZmHOX2a(2)   gtaacagttttccggcgagcgtgctccgtgtaagtaacggcgtcacgaatcacgttctcgagaaagatcttgagaacgccgcgagtctcttcatagatca  19923800                      ------>ZmHOX2a(1)                   ------>NtERF2               --------->ANAC58               --------->ANAC46               --------->ANAC58             <---------ALFIN1            <---------REM1(2)                       <------MYB46(1)           <-----------HVH21                        <------MYB83        --------->ANAC58                           --------->MYB59        --------->ANAC58                      <---------TOE1(2)     --------->ARR14(2)                       <---------TOE2(2)     <---------ARR14(2)            <----------ID1  --------->MYB46(2) ------->MYB46(3) --------->DEAR3(1)         <-----------RAV1(2)                  <----------DOF2   < ============================HOX2a_HOX2a ------->TEIL                      --------------------->WRI1   aaccactgatacgcttcacgcctcctcttctcgcgagacgacgaatcgcaggtttggtaatcccttggatgttgtctctgagtactttccgatgtctctt  19923900                  ------>ZmHOX2a(1)            ------>ZmHOX2a(1)           <---------MYB59       <----------DOF2                 ----------->HVH21      <---------DAG2                ------>NtERF2                             ---------->DOF2   ------>ZmHOX2a(1)        <----------DOF2                   --------->AHL20(2)  <---------ALFIN1<----------DOF2------>ZmHOX2a(1)            <---------AHL20(2) --------->ATERF1(1)       <---------DAG2                    <---------AHL20(2)         <---------AHL20(2) ---------ATERF1(1)     ------>ZmHOX2a(1)<<<<<<<GRF7         --------->AHL20(2)   <---------GLK1(2)   ggctcctccctttcctaatccttttcctccctttcctcggcctgacatttttctcttgggaaattaaattcgaactaagaaaaagattatttgattttgc  19924000              <---------WOX13(1)             <------------CBF            --------->ATHB12                                          <---------ANAC58           *TSS     ----------->GT1                                   <---------ANAC58        =======          <---------WOX13(1)     ----------->GT1                 <------ZmHOX2a(1)            <------ZmHOX2a(1)        --------->ATHB12 <------------CBF  <------ZmHOX2a(1)  <------ZmHOX2a(1)          <----------DOF2       <---------YAB1--------->YAB1 <-----------TBP   <XXXXXXXXXXXXXXXXXXXXMIR847<-----------GT1   cgaatggttttgattgattgaaatgaaaattgagtttgttatataggatgagacgacgagaagaggaggagtgcttgtgttttttacaaaactttaggaa  19924100              ------>ZmHOX2a(2)             <---------At4g35610                                            <---------MYB52(1)            <---------ARR14(2)                                   --------->ARR11(3)            <---------AGP1                                      --------->ATHB12            --------->ARR14(2)                             --------->AHL20(2)                    <---         <---------TOE1(2)                                 --------->AHL20(1)                   -----        <---------MYB52(1)                      ------->MYC3    <---------ICU4                  -----       <-------GAMYB                            <-------MYC3   --------->ICU4              --------->ARR14(2)      <---------ANAC58                         <---------ANAC46<---------YAB1        <---------MYB52(1)      <---------ANAC46                      <---------LBD16<---------AHL20(2)      ------------------      <---------MYB46(3)                  --------->ARR14(2)   <---------ATHB12   ------>ZmHOX2a(2)      <---------ANAC58              <---------YAB1         <---------AHL20(1)   <---------AGP1 ------ <---------ANAC46              <---------MYB46(3)      <---------YAB1      <-------GAMYB   <---------ARR14(2) <---------ANAC58              --------->MYB52(2)      <---------AHL20(2) <---------MYB46(3) <------- <---------ANAC58       --------->ETT(2)  <---------ARR14(2)<---------AHL20(2)  <---------ARR14(2) ====================HOX2a_HOX2a<-------GAMYB --------->LBD16 <---------TOE2(3) --------->ARR14(2)   gttgtgtgtcgttggatctgagtttatcgacggtcgttatcatctatccgcgtgtttataatttaatgattttggaccgttggatctgtttgctatccgc  19924200                               --------->ANAC58         --------->At4g35610   --------->ANAC55(1)    <---------YAB1             --------->ANAC55(2)  <---------ICU4               <---------ANAC55(2) --------->ICU4                --------->ANAC46 --------TGA1            <---------MYB52(1)                                                      <--- ---->bZIP60(2) ----------->RAV1(2)                                  --------->LBD16             ---- ---->ANAC46    <---------At4g35610                                 <---------HSFB2a(2)          ---- ----->TaNAC69(2)      <---------MYB46(3)     <-------TEIL      --------->ZAT18       <----------DOF2 --->LBD16      --------->At4g35610   ----------->GT1           <---------ZAT14<---------ANAC46  ---- --LBD16 <---------At4g35610   --------->ANAC58         ---------->DOF2 ---------->DOF2         <----   gtcattatgcctgatgacatctgagccgttgatacgcaattggtaagattcatcaagttaaaggagcgctctgggaaagttgtgttttctttcacaaaat  19924300                                                                                          <---------ANAC58           <------MYB46(1)                                                                <---------ANAC46           ----------->GT1                                                                <---------ANAC58           <------MYB83                                                               <-------GAMYB        <---------MYB52(1)                                                           --------->MYB111(1)    --------------->AGL15                                                            <---------MYB46(3)   <---------ANAC58                                                                  --------->MYB52(2)   <---------ANAC58                                                                <---------MYB52(1) ------AHL20(2)                     <-------TEIL <------ZmHOX2a(1)                 <--------P ----->ATHB51                   --------->ARR11(3)                               <------MYB83 ----->ATHB12                <---------WOX13(1)<---------TOE2(3)                 <------MYB46(1) ----->AHL20(2) <---------TOE2(3)--------->CCA1(2)                              <---------TOE2(3) -----AHL20(2)  <---------YAB1  <---------ARR11(3)                              --------->MYB59 <----   tatttgcttcgtttggttaacattgtatgtgatagatatacatgtgattaaggagaatgctagttttgttctcccttgaaattaggttagttgtgtgttt  19924400                                                                  --------->ZAT14                                                                  <---------ZAT14                                                              --------->ARR11(3)                                                              <---------ARR14(2)                                                              <---------ARR11(3)      <--------P                                             <----------DOF2  --------->ARR14(2)   <---------TOE2(3)                               ------>ZmHOX2a(2)              --------->GLK1(2)    <---------TOE1(3)                             --------->ARR11(3)           --------->YAB1           <---------YAB1               <------ZmHOX2a(1)       --------->YAB1   <---------TOE2(3)          <---------AtMYB61 ----------->GT1             <---------ARR11(3)   <---------TOE2(3)        --------->GLK1(2)  <------ -----AHL20(2) =======================HOX2a_HOX2a <---------TOE1(3)   <---------ZAT6  <---------WOX13(1)   atttgggaaaatagggaggattaagaacattgatcttggaatcaaaacttttgaggttaatgaaaatctgtagtgagaatgtgttatggttgatttaagt  19924500  Previous    Next  AGI:  At3g53730.1    Description:  histone H4. Identical to Histone H4 [Arabidopsis Thaliana] (GB:P59259;GB:P02308); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59690.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT3G45930.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59970.1); similar to hypothetical protein OsJ_028319 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44836.1); similar to histone 4 [Elaeis guineensis] (GB:ABD62753.1); similar to histone H4 [Hyacinthus orientalis] (GB:AAT08725.1); contains InterPro domain Histone H4; (InterPro:IPR001951); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histon Range:  from: 19923472    to: 19924011    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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