Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->KAN4(1)                              <---------KAN4(1)                              <---------HSFB2a(1)                             <------ZmHOX2a(2)                            <-----------ARR10                            --------->ARR14(2)                            <---------ARR14(2)                            --------->CCA1(2)                           <------NtERF2                           <-----------HVH21                         <---------ANAC58                         --------->LBD16              ======================HOX2a_HOX2a                 ------>ZmHOX2a(2)              ------>ZmHOX2a(1)--------->KAN4(2)               <------ZmHOX2a(2)             --------->TOE2(3)--------->HSFB2a(1)              --------->ARR14(1)             --------->TOE1(3)<---------ICU4                  <---------ARR14(2)  <---------YAB1         <---------ANAC58                     --------->ARR14(2)   --------->At4g35610 ------HSFC1(2)          <---------ANAC46            ---------->DOF2     --------->ARR14(2) ----->HSFC1(2)         <---------LBD16           --------->At4g35610  --------->ANAC58   <---------- ------HSFB2a(1)      ------->GAMYB               <---------At4g35610  --------->ANAC58 <---------SPL7 ----->HSFB2a(1)  --------->MYB46(3)     --------->ETT(2)   ----------->ARR10 --------->ANAC46   gcttcttattcgcttccttaacaactggcggatcattccatggtctaccttcagctaaagcttggatccggtcacgatacacagaagcagcgttcgaatt  19916100                                        --------->LBD16                                       <---------ANAC46                                       <---------ANAC58                                 --------->LBD16                         <---------At4g35610                                <---------ANAC58                         --------->At4g35610                                <---------ANAC58                         <---------ZAT2                                <---------ANAC46                       <---------ALFIN1                                <---------ANAC55(2)            <-------GAMYB                             <---------ARR14(2)               --------->MYB52(2)                   --                      ------>ZmHOX2a(1)<---------ANAC58       <---------MYB46(3)     <---------------AGL15            --------->ARR11(3)  <---------ANAC55(1)          --------->SPL7         --------->TOE2(3)            <---------ARR11(3)  --------->ANAC55(2)         <---------MYB52(1)      <----------------           --------->CCA1(1) --------->ARR14(2)            <---------SPL7--------->ZAT2         -----           --------->RVE1(1) --------->GLK1(2) --------->GLK1(2)   --------->MYB46(3)---------------- -----------WRI1     --------->TOE2(3)<---------LBD16    --------------->AtSPL3     <----------------   gtacttggagataatatctgtctccttagcgattccgtattgcgcgaagaatttgttgagccgttcgttaccaccagcttccattttcttaatctggatc  19916200                                                                                                    -                                                                                                  ---                                                                                               ------                                   --------->CCA1(2)                                           ------                                   --------->GLK1(1)                                           ------                                  <---------ARR14(2)                                          -------                         ----------->HVH21                                                   <-------                        ------>ZmHOX2a(2)                                                    --------                        ================HOX2a_HOX2a                                         ---------                       <------ZmHOX2a(2)                                                    <--------                       =================HOX2a_HOX2a                                         <--------                       --------->At4g35610                                                 <---------ANAC58                       <---------At4g35610                                                 <---------ANAC58                      ------->TEIL--------->ARR14(2)                                       <---------ANAC46                      <---------AGP1                                 <---------HSFB2a(1)   <---------ANAC55(2)                      <-----------ARR10                              --------->HSFB2a(1)  <----------                      <---------ARR14(2)                         --------->LBD16          -----------                      --------->ARR14(2)                        --------->LBD16         --------->GLK1(2) ------->DEAR3(1)  --------->ANAC55(2)                          --------->ANAC46        ------------- -AGL3             <---------ANAC55(2)     --------->ANAC58    <---------HSFB2a(2)     <---------ARR14(2) ->ZmHOX2a(2)      <---------ANAC46<---------GLK1(1)           --------->HSFB2a(2)     --------->ARR14(2) ----->WRI1       <---------LBD16<------ZmHOX2a(1)    <---------DEAR3(1)               <---------GLK1(2) -AGL2  ------->TEIL  --------->GLK1(2)    --------->ANAC58    <---------LBD16       <---------YAB1 -   gcagaccatgaatccatggttacggatctgacgaaggatatgtgaacgcctaagcctcggtgtttcccggagcattccaaacacatgaagattccgtacg  19916300                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                         <---------RAP2.6(3)                                                                                        --------->DREB2C(2)                                                                                        --------->RRTF1(2)                                                                                        --------->ANAC46                                                                                        --------->RAP2.3(3)                                                                                        --------->RRTF1(3)                                                                                        <---------ATERF1(2)     ------>NtERF2                                                                      --------->RAP2.3(2)    --------->DEAR3(1)                                                                  --------->DEAR3(1)    --------->ANAC58                                                                    --------->RAP2.6(2)    --------->ANAC58                                                                    --------->ATERF1(2)  <---------ATERF1(1)                                                                  --------->ORA47(2) --------->DEAR3(1)                                                                    --------->RAP2.3(1) -------->MYB46(3)                                                                     --------->ERF1 ------>MYB52(1)                                                                       --------->RRTF1(1) --->ANAC58                                                                            <------NtERF2 --->ANAC58                 <---------ZAT18                                            --------->ATERF1(1) --->ANAC46                 --------->ZAT18                                            --------->DEAR4(2) -->SPL7                   --------->ANAC58                                           <---------RAP2.3(1) --SPL1(1)                 --------->ANAC58                                           ------>NtERF2 ->SPL1(1)                --------->At4g35610                                        --------->DEAR3(1) >LBD16              <---------At4g35610                                             <---------DEAR3(1) -SPL7          --------->ARR14(2)                                                 <-----------HVH21- -SPL1(2)       <---------ARR14(2)                                                --------->TGA1a   - -----AtSPL3    <---------GLK1(2)                                                 <---------O2     <- ---->AtSPL3   <------ZmHOX2a(1)                                                  <---------TGA1a  <- ----->SPL14 <---------TOE2(3)                                                    --------->O2     -- -------->DEAR3(2)   ----------->RAV1(2)                           <---------HSFB2a(1)<---------ATERF1(1)   aaaccgacgcccattgaggattcttctgagcgcaatcgacacataccttgttttcaggctgagattggagagttcgtaattgtctcgtcgccgccatgtt  19916400                                     <---------ARR11(3)           --------->SPL7            <-----------ARR10    <---------ZAT2                   <---------AGP1    --------->GLK1(1)                --------->ARR14(2)    --------->ZAT2                   <---------ARR14(2)    <---------At4g35610     --------->TOE1(3)                                  <---------ANAC58    <---------GLK1(1)       --------->TOE2(3)   --------->ARR14(2)             <---------ANAC46    --------->At4g35610    ----------->RAV1(2)  <---------ARR14(2)             <---------ANAC58 --------->LBD16          -------->P --------->AGP1                      <---------WOX13(1) -------->ANAC46          ------>MYB83 ------>ZmHOX2a(2)           *TSS <------------CBF          <-- -------->LBD16 --------->YAB1       --------->ARR11(3)           --------->At4g35610           <---- --------LBD16 <---------YAB1       <---------CCA1(2)          <---------At4g35610              <---- --------HSFB2a(2)        ------>MYB46(1)      <---------CCA1(2)  <---------At4g35610      <--------- ------->HSFB2a(2)  --------->WOX13(1)<------ZmHOX2a(2)       <-----------RAV1(1)       <-----------GT1   tcccggagctccgaacgatgatcaatccaacctgaatcagatctaatccaaatctcgcagacttgtgctgctcagattgatgcgtttttttttcttttcc  19916500                                                         ----------->HVH21                                                        <-------MYC3                                                        ------->PIF4                                                        ------->MYC3                                                        ------->PIF5                                                        ------->MYC2                                                        <-----------HVH21                                                        ------->MYC4                                                        <-------MYC4                                                        <-------PIF5                                                        <-------PIF4                                                        <-------MYC2                                                       --------->ANAC58                                                       =========================MYC_MYB                                                       --------->ANAC55(2)                                                       --------->TGA1a                                                       --------->bZIP60(2)                                                       --------->ANAC58                                                       <---------ANAC55(2)                                                       <---------O2                                                       <---------TGA1a  --------->MYB52(2)                                                       --------->O2     <---------MYB46(3)                                                   <-----------HVH21   <--------P                                          <---------ANAC55(1)         <---------MYB52(1)                                          <---------ANAC58           --------->LBD16                                          --------->ANAC55(2)       <---------HSFB2a(2)                                          <---------ANAC55(2)       --------->HSFB2a(2)  <-----------GT1                         <---------ANAC46         <---------LBD16              <---- -------MYB52(1)         <---------LBD16  <---------ANAC58         <---------ANAC46            <----- -----ANAC58      <---------AHL20(2)     <-------TEIL<------------OsbHLH66                     ------ -----ANAC58     --------->AHL20(2)  <---------------AtSPL8     --------->GLK1(1)            -------- -DOF2        ------>ZmHOX2a(1)      <---------------AtSPL3     <---------GLK1(1)           <--------   gttttttctcttcttcctaataaatgttcggggttttttttggtacgtgtctctggcacgtgagaggtttccggtagtttctcaaatggcccaaatgata  19916600                                                                                     <-----------GT1                                                                                   ------>ZmHOX2a(2)                                                                     <---------AHL20(2)     <-----------GT1                                                 --------->AHL20(2)    <---------ICU4 -----ICU4                                                   <---------YAB1       <------ZmHOX2a(2) ----YAB1                                                  --------->YAB1        <---------ARR11(3) --->ICU4                                  ------>NtERF2   <---------ICU4        --------->ARR14(2) ->YAB1                      --------->AHL20(2)           <---------ATHB12       --------->ARR11(3) -ATHB12                     <---------AHL20(2)         --------->WOX13(1)       <---------ARR14(2)   attgtatttactatttagtccaaatatgaaattatatgtagacgatgcccaagatgcccaatcatggttatttatatgtagacgatcttacaattcttac  19916700                                              <---------DAG2                                <--------                                          --------->MYB46(3)                               <---------AHL20(2)                                         -------->P                                     --------->AHL20(2)                                        --------->MYB52(1)                              <---------AHL20(2)                                        <-----------GT1                                --------->AHL20(1)            <---------AHL20(1)         ------->GAMYB  --------->AtLEC2                 <---------AHL20(1)            --------->AHL20(1)        <---------MYB46(2)                               --------->AHL20(2)            <---------ARR11(3)        <---------MYB52(2)                               <---------AHL20(2)            --------->ARR11(3)        --------->MYB46(3)                          <------ZmHOX2a(2)         <---------------AGL15       <---------At4g35610                         <---------ARR11(3)         --------------->AGL15<---------ARR11(3) <-----------GT1        --------------->AtSPL3  <---------ARR11(3)         --------->REM1(1)<----------DOF2           --------------->AtSPL8      <   tcaagagctatctatatattgtagataaactacatcttcaactaaccactttaaccatgcattaagccgaagtttaagtactagatcaatttatttattg  19916800                                                               <---------ARR11(3)                                                               --------->ARR11(3)                                                               <---------ARR14(2)                                            <---------------AGL15                                           <-----------------AG--------->ARR14(2)                                           <-----------------AGL3                                   -                             <---------HSFB2a(2)         --------->TOE2(3)                          - --------->YAB1              --------->HSFB2a(2)         ----------->GT1                <---------MYB46(3) -AHL20(2)         <---------MYB52(1)      <-----------------AGL1  ------>ZmHOX2a(1) <-----------RAV1(1) ---------YAB1    <-------GAMYB         <---------MYB52(2)--------->At5g28300 <----------DOF2  ------   ttatcatacatttgtgtctccgttaatacttagagaagactcactaacaattttggaaaccgtaatatcctctacatgagctttgttgtgttgttgaacc  19916900                                                                                                 ----                                                                                                 ----                                                                                                 ====                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                               <-----                                        <---------TGA1a                                       -------                                        <---------ANAC55(2)                                   <------NtERF2                                        --------->TGA1a                                      ------>NtERF2                                        --------->O2                                         <-------                     <--------P         --------->ANAC58                                     <-------                     <---------WOX13(1) --------->ANAC58         <---------ARR11(3)         ---------                     =============================MYC_MYB       <------ZmHOX2a(1)           ---------                    ==============================MYC_MYB    <---------LBD16                ---------                    <-------GAMYB       --------->ANAC46 ------>MYB83                       ---------                   <---------MYB46(3)<---------ZAT2      ------>MYB46(1)                    ---------                  --------->ALFIN1<---------ANAC58     <---------MYB111(1)                  ---------                  <---------AtMYB61 --------->ANAC58   <---------MYB59                      <--------      --------->ATHB12    ------>ZmHOX2a(2)     <---------MYB52(1)                  --------->At4g35610    <---------WOX13(1)    =================================HOX2a_HOX2a  <---------At4g35610 --------- -------->ANAC58<---------ANAC46  <---------ANAC58     <---------MYB46(2)           <---------At4g35610 -------->ANAC58<---------bZIP60(2) --------->ANAC58<------ZmHOX2a(1)   --------->At4g35610--------->RAP2.3(1) --->MYB46(3)--------->ICU4----------------------->TaNAC69(2)<-----------RAV1(2)    <---------ZAT2  -   acaaggattgatggaatgatgtggttgatcgaagaggcgagcacgtctccgataggacctaactcaggatgttcagcttgacgctcagctaatgccgcca  19917000  Previous    Next  AGI:  At3g53710.1    Description:  AGD6; DNA binding. similar to ASP1 (PDE1 SUPPRESSOR 1), DNA binding [Arabidopsis thaliana] (TAIR:AT2G37550.1); similar to ASP1 (PDE1 SUPPRESSOR 1), DNA binding [Arabidopsis thaliana] (TAIR:AT2G37550.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO15618.1); contains InterPro domain Arf GTPase activating protein; (InterPro:IPR001164) Range:  from: 19914291    to: 19916467    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g53720.1    Description:  ATCHX20 (CATION/H+ EXCHANGER 20); monovalent cation:proton antiporter. similar to ATCHX18 (cation/hydrogen exchanger 18), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT5G41610.1); similar to ATCHX19 (CATION/H+ EXCHANGER 19), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT3G17630.1); similar to ATCHX17 (CATION/H+ EXCHANGER 17), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT4G23700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15619.1); similar to Sodium/hydrogen exchanger [Medicago truncatula] (GB:ABD32190.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN Range:  from: 19916656    to: 19921090    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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