Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  --------->DOF5.7(2)                                                              <---------ANAC58                                                              <---------ANAC46                                                              <---------ANAC58                                                         <---------ICU4                                                        ------>ZmHOX2a(1)      --------->YAB1                                   --------->TOE2(3)              <-----------GT1      <------ZmHOX2a(1)           <---------ICU4    --------->ARR14(2)    <----------DOF2 <---------MYB52(1) ---TEIL                          --------->ATHB12 <---------GLK1(1)    --------->At4g35610       <-- ->At4g35610------->GAMYB         --------->YAB1   --------->GLK1(1)    <---------At4g35610       ---   cattggaaggataaccctcccaagtatgctcttgaatcatgggcaaatcacagaaatcctcatttcgtttactgagcttaaatgtgattttcgttatccc  19908000                          <----------DOF2                    <---------HSFB2a(1)             <---------YAB1                    <---------HSFC1(2)     --------->SPL7                    --------->HSFB2a(1)    <-------TEIL                    --------->HSFC1(2)--------->RAP2.6(3)                 --------->ARR14(2)       ----------->ARR10 <---------DAG2--------------->AtSPL3         --------->ZAT6 -------ZAT2      <---------GLK1(2)  --------->MYB52(1)   --------->STY1(2)   <---------At5g28300 ------>ZAT2 <----------DOF2        ----------->HVH21     <---------STY1(2)  <-----------GT1    -----   agttgtgctaagatgctttggaatctccctttcgaaacttgacggtacagcatcactattagctagcgatgaacagtattcactgtgtttctcatcagtt  19908100                                                                                                   --                                                                                                 <---                                                                                                -----                                    --------->At4g35610                                        <-----                                  <---------WRKY38(1)                                          ------                                <-----------HVH21                                              ------                            <---------ALFIN1                                                  -------                         --------->ANAC46                                                     <------                         --------->ANAC58                          <---------bZIP60(1)      ---------                         --------->ANAC58                       <---------ZAT6             --------->MYB46(3)                         <---------ETT(1)                   <---------YAB1           <---------ANAC58         <------ZmHOX2a(1) <---------REM1(2)          --------->LBD16                <---------ANAC58 ---->YAB1               ----------->HVH21          <---------LBD16--------->bZIP60(1) --------->DOF5.7(2)   atagtctcataggaaccagaacaagacccgacacggtcaccagaactcgatttagccggattactagtgatatcgcgaaaactagaggcgttatccacca  19908200      ----------->HVH21    <---------O2    --------->O2                                      <---------TOE2(2) ----------->HVH21                                  <---------ANAC58 <---------ARR14(2)                                --------->MYB52(2) --------->ARR14(2)                            <---------HSFC1(2) ------->LBD16                                 <---------HSFB2a(1) ------LBD16                                   --------->HSFB2a(1) ---->MYB52(1)                                 --------->HSFC1(2) ----ALFIN1                                   <---------TOE2(3) --->AtMYB61                                  <---------TOE1(3)                   <---------ARR11(3) --->DEAR3(1)             ------>NtERF2--------->ATHB12           <-----------RAV1(1) -->MYB46(3)        <---------ARR11(3) <---------ICU4 <---------TOE1(2)           --------->ARR11(3)- ---MYB55(2)        --------->ARR11(3)--------->ICU4<---------ANAC58          ---------->DOF2       < >ANAC46           <---------GLK1(1)  <---------YAB1<---------ANAC46      <------ZmHOX2a(1)      <---   ccggagacgggactgggtttgatatctccgacttcatgtcatcatttgaaggttccttggtttgtctcttgttggaggaataaagctcttcttcgtctag  19908300                                                                             <---------ANAC58                                                                          <---------MYB52(1)                                                                     --------->MYB52(1)                                                              --------->ANAC46                                                             <---------HSFB2a(2)       ----------->GT1 -------->ARR11(3)                   ------>ZmHOX2a(1)       --------->HSFB2a(2)  >>>>>>>>>>>>>>>>>LFY ---------ARR11(3)               <---------ARR14(2)         <---------ANAC46 <---------ANAC58 ------GLK1(2)---------->DOF2    --------->ARR14(2)      <----------DOF2<-----------RAV1(1)   attatcttgttcaaaacaaagacggtctctcttcaaatccttcttcgtttctgaattctctttcgcgaaacaaactgttgcttctcccattgtaaaattt  19908400                                                                                             <-------                                                                                          --------->YAB1                                                                                     <---------ZAT14                                <---------ARR11(3)                                   <-------TEIL   --------->AHL20(2)        <---------GLK1(2)                                       --------->ZAT18   <---------ARR11(3)      <---------TOE2(3)                                         --------->ZAT14 --------->ANAC58    ----------->HVH21                                             <---------SPL7 --------->ANAC58  <---------ZAT6                          ------------>CBF      <---------------AtSPL8   ctcaagaaattagcacttgtactgtgactgagattatctctgagatttgtaaggcttaagaaacaattcgaattccaagttttggggtacactgatattg  19908500                     <---------MYB46(3)                  <-------MYC3                  ------->MYC3           ---------->DOF2                                                      <-----------GT1        <---------ANAC46                                                     <---------AHL20(2)        <---------ANAC55(2)                                              <---------AHL20(2)        ----------->GT1                                             --------->ARR14(2)        --------->ANAC55(2)                                         --------->ARR11(3)       ------>ZmHOX2a(2)                                            <---------ARR11(3)      <------ZmHOX2a(2)               XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B  <---------YAB1     --------->ARR14(2)               <---------ARR14(2)            <---------ARR14(2)     <---------ARR14(2)               --------->ARR14(2)           <------ZmHOX2a(1)    --------->At4g35610 -----CBF--------->LBD16     ------------>CBF ----------->ARR10  <---------TOE2(3)    <-----------RAV1(2)   caaacccgatccgtaaaacacgtttgatggtcccaatccaaatcggagaagaaactctcttgtgtttgaggatttttatttttttccctcagaagaaatc  19908600                          --------->TOE2(3)                          --------->TOE1(3)                       <-----------GT1                <---------ARR14(2)                      <---------------------WRI1                --------->ARR14(2)                  ---------->DOF2                --------->AGP1                  --------->ATHB12                                    -            ------->TEIL --------->ZAT6        --------->ICU4                                       <        <---------------AtSPL8                 <---------YAB1                                   -----        <---------------AtSPL3               <---------At4g35610                         --------->MYB52(1)  ----------->GT1<------ZmHOX2a(2) <-----------GT1<---------YAB1             <---------ZAT6   <------   gaaatggagaaatgtaccgatctagtaaccctaaaatttacatatggagatgattaaagtcgaaatattcacagagatagtggtaagaacaaaacggggt  19908700                                                      --------->ARR11(3)                                                      <---------GLK1(2)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                                                      <---------ARR11(3)                                                    ----------->ARR10                                                    <---------TOE2(3)                                                 ------>ZmHOX2a(2)                                               <---------AGP1                                               <---------ARR14(2)                                               --------->ARR14(2)                                               --------->ARR11(3)                                               <---------ARR11(3) -------->GLK1(1)                             <---------CCA1(2)                             --------- ---------GLK1(1)      ---------->DOF2  <----------DOF2                                     <-------- ---->ALFIN1       --------->GLK1(2) <---------ARR11(3)            --------->ATHB12    ---------->DOF2 ---ANAC46        <---------GLK1(2)  --------->ARR11(3)--------->CCA1(2)    --------->GLK1(1)   ggaaaccctaagctcgaccagaatcgaaagttgggaagagaactttgtggatctaagatttgcagaaaacgattagagaaatcgatttcgaaagaaatcc  19908800                                         --------->LBD16                                        <---------HSFB2a(2)                                        --------->HSFB2a(2)                                       <---------LBD16                                        <------NtERF2                                     <---------ARR14(2)                                     ---------                                     --------->ARR14(2)                                    <---------LBD16                                 <---------TOE1(3)                                        <---------bZIP60(2)                            <---------ZAT6                                             ----------->HVH21                           <---------TOE1(3)                                        ------->MYC2                           <---------TOE2(3)                                        <-------MYC2                 --------->ARR14(2) --------->GLK1(1)             ----------->GT1   ------->MYC3  --- >GLK1(1)        <---------ARR14(2) <---------GLK1(1)         ---------->DOF2       <-------MYC3  <-- -GLK1(1)       <------ZmHOX2a(1)<---------TOE2(3) --------->CCA1(2)----------->GT1<---------ANAC46--   gaacaaggtaagagaagaggaaacgaattagggttagggtttccggaagtgagataagagagggaaaagagagaaaatagagggaacgtgtaacgcggca  19908900  Previous    Next  AGI:  At3g53680.1    Description:  PHD finger transcription factor, putative. similar to PHD finger family protein [Arabidopsis thaliana] (TAIR:AT2G37520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18035.1); similar to predicted protein [Populus alba x Populus tremula] (GB:AAR14274.1); contains InterPro domain Acyl-CoA N-acyltransferase (InterPro:IPR016181); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 19903841    to: 19908390    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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