Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                       <---------WOX13(1)                                                    --------                     --------->ATHB12                                                        --------        --------->AHL20(2)                                                                --------->ARR14(2)       <---------AHL20(1)     ------>MYB83                                             --------->ANAC58       --------->AHL20(1)     ------>MYB46(1)                                          --------->ANAC58       <---------AHL20(2)<---------WRKY18(1)                                         --------->MYB52(1) -----------GT1 <---------AHL20(2)                                                  --------->TOE1(2) ----DAG2      --------->AHL20(2)       --------->ANAC46                           <---------MYB52(2) -GLK1(2)   --------->YAB1   ----------->RAV1(1)                                   --------->MYB46(3)   tttaactaaaatatttataaaattgattgaccaacaaaaaatacacaatttgctctaaattgacaaattcgagttctatgttagaacaaacgaaaacgca  19861500        <-------GAMYB  ------>MYB83  <---------ANAC46       <---------DEAR3(2)         <---------MYB52(1)       <---------MYB46(3)    --------->MYB52(1)      <---------DEAR3(1) --------->YAB1                                                           <--    ------------>AtMYB77<---------ATHB12                       --------->GLK1(2)           <---------ZAT6 <---------ARR14(2)    ------>MYB46(1)             <-----------HVH21                       --------->ALFIN1 --------->ARR14(2)   --------->WOX13(1)          <---------ANAC58                     --------->ZAT18 ->ANAC46           --------->MYB46(3)            <---------ANAC58  ----------->HVH21--------->ZAT18 ->ANAC58<---------ARR14(2) <---------ARR14(2) --------->DAG2 --------->DAG2        --------->ALFIN1 ->ANAC58--------->ARR14(2) --------->ARR14(2)---------->DOF2---------->DOF2      <---------O2<------   tcaaatcggcggtttctcttcaaccaatcagaaacggttgtgtaagaaaaaagcgtgagagagaaaagctgtgaccttggtgagaagtgggcagtgttga  19861600                        <---------At4g35610                        --------->At4g35610                                                       ---                       <---------DEAR3(1)                                                         ---           <---------HSFB2a(2)     --------->GLK1(2)               --------->LBD16               <---        ------>ZmHOX2a(2)<----------CDC5                           ----------->GT1           -------- -------At4g35610     --------->ZAT18         <----------DOF2    <---------LBD16            --------- ---REM1(1)--------->HSFB2a(2)    <---------GLK1(1)           <---------At4g35610        <------ZmHOX2a(1)   agctaatcgatctcgagaactgaggtcgctgagtcgaaatctgttcatctttcactcactgttcatctccggtgaaaacatttcattcggaggaaaaagc  19861700         --------->GLK1(2)                                    --------->GLK1(1)             ---------    ----------->GT1                                   --------->CCA1(2)                    --------->ARR14(2) ------>ANAC58    --------->HSFB2a(2)                <---------ARR11(3)                    <---------ARR14(2) ------>ANAC58    <---------HSFB2a(2)                --------->ARR11(3)                    <---------GLK1(2) ------LBD16   <---------AGP1                    <------ZmHOX2a(1)              --------->ARR14(2) ->DAG2  <---------ARR14(2)                   --------->At4g35610               <---------ARR14(2) ->DOF2  ------->TEIL                      <XXXXXXXXXXXXXXXXXXXXMIR776        ----------->ARR10 <----   acggagaggtgaatctaggtctggaaattcactgggtaagagaaaatcagaggaagatttagagaaatctaactcgtgagaagaaatgcagacgattctc  19861800              ------>ZmHOX2a(2)             --------->CCA1(2)             <------ZmHOX2a(2)            --------->ARR11(3)            <---------ARR11(3)            --------->AGP1            <---------ARR14(2)            --------->ARR14(2)      <---------LBD16      --------->LBD16                                                  ==============================     <---------ANAC46                        <---------AHL20(2)        ---------->DOF2    <---------------------WRI1               --------->AHL20(2)    <---------ANAC46    <---------LBD16              --------->TOE1(2)                 <---------ANAC58 >GLK1(2)  --------->GLK1(1)    --------->ANAC58             --------->ARR11(3) -----LBD16<---------GLK1(1)    --------->ANAC58  --------->ATHB12 <---------ANAC58          --------   tgggattacggggagatctaagagaagagaaggaacccaagaagaaattaaacgattagagaagaaattgagtgaaagagagagagagagaagagcgaac  19861900       --------->MYB52(1)            --------->At4g35610                <----------DOF2      ----------->HVH21              <---------At4g35610            <-----------GT1 =========================bZIP_DOF <---------ANAC58            --------->AHL20(2) <---------TGA1a      --------->ARR14(2)                       <---------AHL20(2) <---------O2         <---------ARR14(2)                      <---------AHL20(2) ==========bZIP_DOF  <------ZmHOX2a(1)        *TSS            --------->AHL20(2)                  --- ->ZAT18       ---------->DOF2     <---------ANAC58---------->DOF2 <---------AHL20(2)            ----   cagacgagacgacggagaaaagaggaaatgggaaatggcttctgagtttatttgaaagttcaaatttttttaatctttttttttttttttgaagtttagt  19862000             <------MYB46(1)             <------MYB83            --------------->AtSPL8            --------->MYB46(2)            <---------------AtSPL8            --------->MYB111(1)        --------->ALFIN1      <---------ANAC46      <---------ANAC58      <---------ANAC58                             <---------MYB52(1)     --------->ATERF1(1)                          --------->LBD16   <---------CCA1(2)     <------NtERF2                            ------->TEIL      =====================================   <---------DEAR3(1)                         <---------ARR14(2)<---------O2   <---------RAP2.3(3)                        --------->ARR14(2)--------->TGA1a --------->ALFIN1     <---------AHL20(2)     <---------CCA1(2)  --------->O2                     <--- ------>DAG2<---------MYB46(3)           <---------ANAC46   ------>NtERF2                        ---- ------>DOF2--------->MYB59            <---------ZAT14   --------->At4g35610                <<<<<<<<<TBF1   aaaggggggcgtgtttggtactattttaaaaacttactgagttctgtgtatccgtgaattgctgccacttgtctctccccttccattttccttcttcttc  19862100               <---------GLK1(1)         <-----------HVH21                                                      --------->At5g28300       --------->DEAR3(2)                                                       --------->LBD16      --------->SPL7                                                         --------->SPL7    <---------SPL7                                                       <---------------AtSPL3   <---------ANAC58                                                ------>MYB83----------->GT1   <---------ANAC58        --------->AHL20(2)            <---------ATHB12<---------------AtSPL8  ---------->ID1        <---------HSFB2a(2)        <---------ZAT14 ------>MYB46(1) =======bZIP_DOF   <----------DOF2            <---------ZAT14    ------->GAMYB <---------ANAC46 -------DOF2   --------->GLK1(1)---------->DOF2    --------->ZAT14----------->RAV1(1) ----------------->WRI1 --------->HSFB2a(2)   --------->ZAT14   --------->MYB46(3)                ---   ttttgtcgtaccgtcggatttcttttctaaaaaataaagaaatagtactacagtatacaatcaataaccaacaaattggtaccgtaaaaacaaacttcaa  19862200                    --------->ARR11(3)                                                              <                    <---------ARR11(3)                                                           <---         --------->AHL20(2)                                                                  <-------         <---------AHL20(2)  --------------->AGL15                                           <-------         --------->ATHB51 <-----------GT1                                                   ---------        --------->ICU4 --------->YAB1        <-----------GT1               <---------CCA1(2)<-------- ------->DOF2   --------->YAB1          --------->AHL20(2)            <<<<<<<<<TBF1     --------->MYB52(1)   caaagttggaattatttatcaagatttataaccaagtttagaataaataaccaagttttctgtattatgttcttcttctatctatatagcaaacgatatt  19862300                                                                     <---------ICU4                                                                     --------->YAB1                                                                     --------->ATHB51                                                                     <--------HAHB4                                                                     <---------AHL20(2)                                                                     -------->ATHB1                                                                     -------->HAHB4    --------->HSFB2a(2)                                             <---------ATHB51    <---------HSFB2a(2)                                             <---------YAB1   <---------LBD16                                                  --------->ICU4  <---------LBD16                                                --------->AHL20(2) ----------DOF2                                                  <---------AHL20(2) ------AHL20(2)              <------ZmHOX2a(1)              --------->AHL20(2) ----------->GT1 --CCA1(1)          <-------TEIL              <-----------GT1   --------->AHL20(2) --RVE1(1)      <---------TOE2(3)--------->ZAT18  <----------DOF2--------->AHL20(1)          -------- >ARR11(3)      <---------TOE1(3)<---------ZAT14 <---------DAG2 <---------AHL20(2)  <-----------GT1 -ARR11(3)      --------->MYB59  <---------ZAT18 --------------->AGL15 <---------YAB1 --------->ANAC46   ttctttcgggacaatttttaggttcaatctaggagtgaacatttgtattcaccttttttagtttaaattaattattatgtcatgttatacaacacttaaa  19862400  Previous    Next  AGI:  At3g53540.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18092.1); contains domain PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED (PTHR21726) Range:  from: 19857625    to: 19861946    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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