Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->DEAR3(1)                <---------ATERF1(1)             ------>NtERF2            --------->ANAC58            --------->ANAC58            --------->ANAC46    ------>NtERF2 --------->ATERF1(2)    <------NtERF2<------NtERF2    --------->LBD16   --------->ANAC58   --------->ANAC58   --------->ANAC46   --------->RRTF1(2)   --------->RAP2.6(2)   --------->DEAR3(1)   --------->RAP2.3(2)   --------->RRTF1(3)   --------->RAP2.3(3)  --------->RAP2.3(1)  --------->RRTF1(1) <---------ATERF1(1)        --------->ARR14(2) --------->LBD16------>NtERF2                             <<<<<<<<<WRKY18 --------->At4g35610        <---------ARR14(2)     --------->WRKY12 ------>NtERF2 --------->DEAR3(1)              --------->MYB46(3)    <---------ANAC46 -------->DEAR3(1)--------->DREB2C(2)        <-----------GT1 --------->MYB52(1) -------->ANAC46--------->MYB52(1)    ------->TEIL --------->WRKY38(1)               --------->ALFIN1 --------LBD16 <---------ALFIN1      <---------GLK1(2)  <-----------HVH21         <------ZmHOX2a(1)   ctccgccgcaatctacgccaccggcatcagtatcggactgaatcttgtaaccgatgactgtcaaaacggtgatgtataagaagaggagagtggctacgaa  19816300                                                                       ==============================                                                                       ------>ZmHOX2a(2)                                                                     <---------ARR14(2)                                                                     <---------AGP1                                                                     --------->ARR14(2)                                                                     <-----------ARR10                                                                     <---------ARR11(1)                                                                     --------->ARR11(3)                                                                     <---------ARR11(3)                                                                     --------->GLK1(2)                                                                     <---------ARR14(3)                                                                     --------->ARR14(3)                                                                    <------NtERF2                                                                    <---------CCA1(2)                                                                    <---------ARR14(1)                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  <---------ANAC58                                                                 <---------LBD16                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                               --------->ALFIN1                                                               <---------DEAR3(1)                                                          <---------ZAT2                                                          --------->ZAT2 <---------YAB1                                                          <---------At4g35610                                        <---------At4g35610 <---------MYB46(3)                                        --------->At4g35610 --------->ALFIN1                                       <---------ALFIN1   --------->At4g35610                       <                                   <---------At4g35610   --------->ARR14(2)                     -----                   ---------->DOF2 --------->At4g35610--------->ANAC46===============================          --------->ZAT14      <----------DOF2      --------->MYB52(1)<------ZmHOX2a(2)    <---------GLK1(1)          <---------ZAT14<---------ALFIN1--------->ANAC46<---------ARR14(2)                --------->GLK1(1)   ctctgcgataactgctctgtagaaagaccacttctttagctccgctccatcaataaacggagctggtggcggatcttgatagtctcttgtctgaaatcct  19816400      --------->SPL7     --------->ARR14(2)                                                                 <---------MYB46(3)  <---------HSFB2a(2)                                                                  --------->ALFIN1  --------->LBD16                                                              <-----------RAV1(1)  --------->HSFB2a(2)                                                    <---------ANAC58 <---------LBD16                                                    <----------DOF2  <---------ANAC46 ==HOX2a_HOX2a                                             <---------DAG2<---------ANAC58 ---------LBD16      <----------DOF2                       <----------DOF2<----------DOF2   --------- ->ZmHOX2a(1)        ------>ZmHOX2a(1)       <----------DOF2     <-----------GT1<-------GAMYB <------ ==HOX2a_HOX2a<---------ALFIN1          <<<<<<<<<TBF1     <------------------------ANAC81 <--------P   tctccgggaacggcttccacatcctttgccatagttaacttcttcttctttcaaacaatagcttttttttcttttgcttctctgttggagtggttagtga  19816500                                                                                     <---------ARR11(3)        <---------ZAT14                                                              <---------AHL20(1)        --------->ZAT14                                             <---------DAG2   --------->AHL20(1)      ------->MYC2                                                  <----------DOF2  --------->ARR11(3)      ------->MYC4                                                 <---------ANAC58--------->AHL20(1)      ------->MYC3                                                 <---------ANAC58<---------AHL20(1)      <-------MYC2                                           <---------YAB1        <---------ARR11(3)      <-------MYC3                ------>ZmHOX2a(1)          <---------AHL20(2)    --------->ARR11(3) >MYB52(2)                 <---------At4g35610           <----------DOF2  <----------DOF2 ---ZAT6--------->ZAT18    --------->At4g35610           <---------DAG2<---------ARR11(3)      <-----   gaagaacatgtgctctgttttatagtgagagctctccttcttgttaatttgtttgtatacttttttattgctttatcttttaaaaaatatttttagtatt  19816600                                                                                              <------                                                                                              -------                                                                             <---------AHL20(2)                                     <---------TOE1(3)                   --------->YAB1    *TSS      --------->TOE2(3)              <---------TOE2(3)              <---------YAB1   --------->CCA1(2) ----YAB1                   <---------ANAC46           ---------->DOF2  <---------ATHB12 ---------->DOF2   tttgccaacgttatatgtttttttggttttttgtgtattgaggtttttttttggaatgaaagtttgtattttcaatgaaaaaattggatataaaagtata  19816700                     --------->YAB1                    <---------YAB1                  --------->YAB1                  <---------ICU4                 <---------YAB1                 --------->ICU4                                                                  <---               <---------ICU4                                                                    ----               --------->YAB1                              --------->ZAT2                        <---              --------->ICU4                     --------->ICU4                                  ----           --------->ICU4                        <---------YAB1         <---------AHL20(1)      <----           <---------YAB1                      <---------ICU4           --------->AHL20(1)      <----         --------->YAB1                        --------->YAB1           --------->AHL20(2)      -----        --------->ICU4                         -------->HAHB4           <---------AHL20(2)     <-----        <---------YAB1 <---------YAB1         <---------YAB1           --------->AHL20(2)    <------- ---ARR14(2)  <---------YAB1                  --------->ICU4      ------>ZmHOX2a(1)         --------- -->ARR14(2)<---------ICU4          <----------DOF2        --------->At4g35610    ------------>CBF <-   cgagtgagttatgattattattattatgagggaagtagctttgacaaaatgattatgaactagctgtcctgaaataaattttgaaccaattctatttaat  19816800   <---------WOX13(1)   --------------->AGL15  <---------ANAC46  <---------ANAC58  <---------ANAC58 ------ICU4                                   --------->ANAC58 ---->HAHB4                                   --------->ANAC58 -----ATHB1                                XXXXXXXXXXXXXXXXXXXX>MIR852 ----->ATHB12                          ---------->DOF2 -----ATHB12                        <---------ANAC55(2) -----YAB1                          --------->ANAC58 ---->ICU4                          --------->ANAC58 ----TOE2(3)             ----------->GT1 <----------ID1 --AHL20(2)     <---------ARR11(3)  --------->ANAC55(1) >AHL20(2)      --------->ARR11(3)  --------->ANAC55(2)   --------->AHL20(2) --------WOX13(1)<---------YAB1     --------->ANAC46      <---------AHL20(2)       <---------ATHB12   gattgcttgatatatcaatatcatacatagttactaatacgtaaagacaagaaccctagtttaatttcagacttagagtttttcaatcgttgaaatttga  19816900                                                                      ----------->GT1                                                           ------>ZmHOX2a(1)                                                          --------->TOE2(3)                                                          --------------->AGL15                                                         ------>ZmHOX2a(2)                                                         ----------------->AGL3                                                        <------ZmHOX2a(2)              --------->TOE1(3)                                                       --------->ARR14(2)              --------->TOE2(3)                                                       <---------ARR14(2)            <---------TOE2(3)                                                       <---------ARR11(3)            <---------TOE1(3)                           <----------DOF2             --------->ARR11(3)           <---------DOF5.7(2)                 ----------->GT1                 <---------YAB1 --------->YAB1      <-----------GT1   aaaattcaaataagttagccagtaaatttctttaaaatttgattcgagtttattttagatcctaaattagaatagtttattctatttaacgttatagttt  19817000                                                                --------->YAB1             --------->YAB1                                                       --------->ANAC55(2)                <---------YAB1                                                       <---------ANAC55(2)              <---------bZIP60(1)                                           <---------ANAC58    <---------YAB1           --------->bZIP60(1)                                           <---------ANAC58  <---------ICU4           --------->YAB1                                           <---------ANAC46  --------->YAB1      <---------ANAC58                             <---------ARR11(1)  --------->AHL20(2)              <---------ANAC58               ---------->DOF2          --------->TOE1(2)   --------->ICU4  --------->STY1(2)      <-------TEIL       ------>ZmHOX2a(2)<-------TEIL<-------TEIL--------->CCA1(2)  <---------YAB1 <---------ALFIN1   <---------WOX13(1)  --------->TOE2(2) --------->YAB1    <---------STY1(2)   gcaccaagtccatgacaaaaagattgatccaaatctattgaacatgcgtctataaatacatgataatgatatgggattagctagcttatgatatcataaa  19817100                                                                             <---------ANAC46                                                                           <---------MYB46(3)       <                --------->YAB1                                      --------->ALFIN1          -------               <---------ATHB12                                  --------->ATHB12            --------         <-----------GT1                                        <---------ATHB12           --------->ARR14(2)        <---------CCA1(2)                                     --------->WOX13(1)        --------->YAB1    <----------DOF2                 <-----------GT1   <------ZmHOX2a(1)   <---------AtMYB61<---------ARR14(2)   acaagactttatatccactcatataaacttgcatagttttatctctcgtagcaataggaagtatcaatcagtggtgatggtggagagctatcagaaccac  19817200  Previous    Next  AGI:  At3g53420.1    Description:  PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel. Identical to Aquaporin PIP2-1 (PIP2-1) [Arabidopsis Thaliana] (GB:P43286); similar to PIP2B (plasma membrane intrinsic protein 2,2), water channel [Arabidopsis thaliana] (TAIR:AT2G37170.1); similar to plasma membrane intrinsic protein 1 [Brassica napus] (GB:AAD39373.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 19814633    to: 19816691    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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