Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <------NtERF2                                   ------>NtERF2                                  --------->RAP2.3(2)                                  --------->RAP2.6(2)                                  --------->RAP2.3(3)                                  ------->GAMYB                                  --------->DEAR3(1)                                 --------->ERF1                                 --------->ATERF1(1)                                 --------->MYB46(3)                                 --------->RAP2.3(1)                                --------->ZAT2                                <---------At4g35610                                --------->At4g35610                                <---------ATERF1(1)            <-------TEIL       --------->DEAR3(1)        --------->LBD16       --------->MYB46(3)                             --------->YAB1        <---------TOE1(2)    --------->ZAT2                                ------>MYB83       <---------ANAC46      <---------At4g35610                           ------>MYB46(1)       <---------LBD16       <---------ZAT2                              <---------MYB59       --------->LBD16       --------->At4g35610                         <---------------AGL15      <---------LBD16   <---------ANAC58                            --------->YAB1  --------->KAN4(2)     <---------ANAC58                  ------->TEIL   <---------MYB46(2)--------->GLK1(2) -->At4g35610       <---------MYB52(1)            >>>>>>>>>>>>>>>>>LFY   --------------->AGL15   <---   cgattaatcccgggttcaatcccttggcttcagcagccgcctatgaaattcagaccaatgtatgcataaatgataccaaacatagaaaacaacaatctag  19799400                                                                           <---------AHL20(2)                                                                         <---------YAB1             <---------ZAT14          --------->ZAT18                 <---------YAB1             --------->ZAT14         <---------ANAC46               -------->HAHB4  ------>MYB83                       <---------ANAC58              --------->ICU4  --------->ANAC58                   <---------ANAC58        --------->ANAC58  --------->ANAC46               ---------->DOF2    --------->ANAC58--------->YAB1          ---------  --------->AtLEC2         --------->ATHB12         --------->ANAC58<---------ICU4     --------------  ------>MYB46(1)          <---------ICU4   <-----------RAV1(1)    <---------ATHB12    ------>ZmHOX2a(1)  --------->ANAC58        --------->ICU4<---------ZAT14      --------->ANAC58          <------------- ---ZmHOX2a(1)            <---------YAB1--------->ZAT18      --------->AtLEC2 <-----------GT1--------   gaccaagcaaacatgtatactgaatgagattattgcaaagcgtgcaatgttgtccagcaatgcatgcaaatgattatttttttctattcctctaaaaagc  19799500                                                        -------->P                                                   --------->GLK1(2)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                      <------ZmHOX2a(2)            ------->TEIL                         ------>ZmHOX2a(2)                     --------->ARR11(3)         --------->ANAC55(2)                --------->LBD16                     <---------ARR11(3)         <---------ANAC55(2)               <---------LBD16                 ------>ZmHOX2a(1)              --------->ANAC58                  <---------ANAC46                --------->TOE2(3)      ----------->RAV1(1)                        <---------ANAC55(2) ->DOF2<---------ANAC55(2)            --------->ZAT18   ------>MYB46(1)           --------->ANAC55(2) ->AGL15        --------->TOE1(3)     <---------ZAT18   ------>MYB83             <---------LBD16  <-- --AGL15  <---------ICU4--------->TOE2(3)    <---------ATHB12                 --------->KAN4(2) ----- ->DAG2--------->ANAC55(2)       ---------->DOF2--------->ANAC58      --------->ATHB12  =============   taagacatcacataatttccttagatcattaacaaaatagcccacaaatcacgaatccaacccttaagaaatcgattgcacattccgggatcgcagaaga  19799600                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                           ------>NtERF2                                                                                           --------->LBD16                                                                                          <---------LBD16                                                                                          <---------ETT(1)                                                                                         <---------LBD16                                                                                         --------->RAP2.6(3)                                                                                      <----------DOF2        ----------->GT1                                                              <---------DAG2       <---------YAB1                            <---------------AGL15             <-----------------AGL1       <---------TOE2(3)                 <---------MYB52(1)                      --------->At5g28300     --------->YAB1                     <-------GAMYB                           <---------DEAR3(2)    <---------YAB1                 <---------ARR14(2)   ----------->GT1        --------------->AtSPL8 ----ZmHOX2a(1)                    --------->ARR14(2)---------->DOF2           --------------->AtSPL3 ---->ALFIN1                   ------->GAMYB     --------------->AGL15       --------->MYB52(1)  ---- ====HOX2a_HOX2a       >>>>>>>>>>GATA-1----------->GT1 --------->DAG2      <---------WOX13(1)    <---   ggagctattatggtaaaatcatctcgatttcaacggagataccgttaaattctacaaaaggtgaaagtatagagaagattgacggtacctttccggcaaa  19799700                                                                                           <------ZmHOX2a(2)                                                                                          --------->ARR11(3)            --------->YAB1                                                                <---------ARR14(2)            --------->ATHB12                                     ==================================HOX2a_HOX2a            <---------ICU4               --------->At4g35610     =================================HOX2a_HOX2a           <---------YAB1                <---------At4g35610     <------ZmHOX2a(1)        --------->GLK1(2)           --------->ICU4                --------->ZAT2         <------MYB83              <---------ARR11(3)      --------->ORA47(1)              <------ZmHOX2a(2)         <------MYB46(1)           <---------AGP1      ------>NtERF2                   ==================================HOX2a_HOX2a       --------->ARR14(2)     --------->DEAR3(1)         --------->TOE1(2)             <--------P                 <------ZmHOX2a(1) ------ARR11(3)                <---------ANAC58          --------->MYB52(1)  ---------->DOF2------>ZmHOX2a(2) ----->GLK1(2)                 --------->ANAC46    <---------ANAC58         ======================HOX2a_HOX2a ----->ARR14(3)                <---------ANAC58    --------->ANAC55(2)      =======================HOX2a_HOX2a ------ARR14(3)                <---------ANAC55(2) <---------ANAC55(2)      <------ZmHOX2a(1) ----->ARR11(3)               <-------TEIL       --------->MYB52(1)      <------ZmHOX2a(1)<---------- ----->ARR14(2)     <------ZmHOX2a(2)--------->ARR11(3) --------->ICU4   ==========================HOX2a_HOX2a --------ARR10   <---------YAB1--------->ANAC55(2) <---------ANAC58      =========================HOX2a_HOX2a   atcttcgccgtccatgattacgatccaaaatatacgtgagatcagctccagtaacgtactaatggtaggaagagaggaggaaaggaaacgaggatctgtt  19799800                                                     <-------MYC4                                                     ------->MYC3                                                     ------->MYC4                                                     <-------MYC3                                                     ------->MYC2                                                     <-------MYC2                                                    <---------TGA1a                       --------->ANAC58             --------->TGA1a                                <-                       --------->ANAC58             --------->O2    --------->REM1(1)             <--                     *TSS                           <---------O2 --------->ANAC46       --------->TOE2(3)                   --------->ANAC46                 ====================================bZIP_DOF<----                   --------->ANAC58                 --------->ANAC55(2)         --------->ZAT6  <---- <---------REM1(2) --------->ANAC58                 <---------ANAC55(2)   <---------ALFIN1    <------ -ARR10     --------->YAB1                --------->AHL20(2)<-----------GT1  <----------DOF2 --------   ttcgacacagagattaataagacgcaaacaaactcacacagagataatatacacacgtgttttatccactacatcgccactttcactaatccataaatat  19799900                                            <----------DOF2                                         ------->TEIL                                         <---------ARR14(2)                    --------->ANAC55(2)  <---------ARR11(3)                   --------->MYB59       --------->ARR14(2) --------------->AtSPL8                  <---------ARR11(1)                     --------->AtMYB61 --------YAB1 <---------DAG2            <---------ARR14(1)                <---------ARR11(3)        - -------AHL20(2)   <---------TOE2(3)    <---------CCA1(2)                 --------->ARR11(3)      --- -----YAB1  <-----------------AGL1     --------->LBD16            --------->ANAC55(2)   <---------TOE1(3) -----AHL20(2)<----------DOF2         --------->ANAC55(2)    --------->MYB59  -------->P<---------TOE2(3) ---ICU4    <-----------------AG      <---------ANAC55(2)<------MYB46(1) <---------CCA1(2)        <-- ->ICU4   <---------MYB52(1)      --------->WOX13(1)     <------MYB83   <---------AHL20(2)  <--------   tattttggaccccttactttttaggtatttcgatttcaatccgtatcttttgttttgctaggttaggcccgtattatatctaccaaaactaaggttgttt  19800000                             <------MYB83                           <---------WOX13(1)                         --------->ATHB12                   <---------ANAC58              <---------At4g35610              --------->At4g35610                          --------->ANAC46 ----->ZmHOX2a(2)  <---------ANAC46                  <----------DOF2 ------>ARR11(3)   <---------ANAC58---------->ID1   <---------ANAC58                          ------- -------AGP1  <---------ZAT2 <------MYB46(1)        <---------ANAC58                     <-------TEIL -MYB46(3)    --------->ZAT2<---------AtMYB61<---------AHL20(2)                <---------CCA1(2)   gatctggttttagttcagcttgggtatggattggtttgtcccgatgttttaatggctttctaagaaaccaattttgtgttcttatcttacatacattgaa  19800100                                                                                      ------>MYB46(1)                                                                                      ------>MYB83                                            --------->ANAC46                <---------ARR11(3)                                          --------->ANAC46                --------->AHL20(1)                                          --------->ANAC58  <------MYB46(1) --------->ARR11(3)     <-                                          --------->ANAC58  <------MYB83  <---------ARR11(3)    <----                            --------->AHL20(2)             --------->MYB59<---------AHL20(1)<-------- -->AHL20(2)    <---------ICU4   --------->YAB1          <---------MYB52(1)<---------CCA1(2)<--------   ataacaaaaatgaattgaatattacaaaaatcaaataatcaaacacacaaaacacatctgtttggttcaactccaatatatctataccaaatggtcatcg  19800200                               ------>MYB46(1)                               ------>MYB83                             --------->DREB2C(2)                             --------->DEAR3(1)                             <---------MYB46(2)                             <---------MYB111(1)                             --------->MYB46(3)                             <---------MYB55(2)                            <------NtERF2                                                           -                            --------->ATERF1(1)                                                     <                            --------->DEAR3(2)                                          <---------ANAC58                            --------->ORA47(2)                  --------->ANAC58        <---------ANAC58                           <---------ATERF1(1)                  --------->ANAC46      --------->ARR11(3)            <---------TOE2(3)--------->DEAR4(1)            --------->ANAC58           <---------ARR11(3)            <---------TOE1(3)----------->HVH21             --------->ANAC58           --------->GLK1(2) --------DEAR3(2) <---------YAB1                           --------->ANAC46           <---------ARR14(2) -------HVH21  <---------MYB52(1)                        ---------->DOF2    --------->YAB1--------->AtLEC2 -WRKY38(1)<---------DOF5.7(2)--------->ORA47(1)    <---------ZAT6    <-----------GT1 --------->ARR14(2) -WRKY12--------->YAB1<---------LBD16       <------ZmHOX2a(2)   --------->ANAC58     <---------ARR14(1)   tcgcttcgaatgataacgttatgttcgggcaccgaccacgaagacgatcgactagagttcaaagccacggtattacaatcagagagagtatcttgcaaac  19800300  Previous    Next  AGI:  At3g53370.1    Description:  DNA-binding S1FA family protein. Identical to DNA-binding protein S1FA1 (S1FA1) [Arabidopsis Thaliana] (GB:P42551;GB:Q9LFI0); contains InterPro domain DNA binding protein S1FA; (InterPro:IPR006779) Range:  from: 19798872    to: 19799821    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g53380.1    Description:  lectin protein kinase family protein. similar to lectin protein kinase family protein [Arabidopsis thaliana] (TAIR:AT5G03140.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18131.1); contains InterPro domain Legume lectin, alpha; (InterPro:IPR000985); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Legume lectin, beta domain; (InterP Range:  from: 19800040    to: 19802394    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version