Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->MYB52(1)                                   <---------ALFIN1                                ------->GAMYB                              ------>MYB83                              ------>MYB46(1)                            --------->ANAC58                              -------->P                                 --------->ANAC58                             ------>MYB83                               --------->DAG2                             ------>MYB46(1)                   <----------DOF2                             <---------ALFIN1               <---------ARR11(3)                       ---------->DOF2                      --------->ARR11(3)         --------->ATHB12 --------->ANAC46                 <---------CCA1(2)  --------->At4g35610--------->LBD16                     --------->AHL20(2)          --------->YAB1 ------->At4g35610  --------->ANAC46<---------ZAT2   --------->ICU4    ---------->DOF2 -MYB52(1)          <---------ANAC55(2)            ---------->DOF2  --------->YAB1<----------DOF2   aagcagaagaaagattgaaaacccgtaaacccaaccccaactgctaaactagctaaagattatatctttctcataaagccataactttcatactaatact  19779200                                                                          <---------ATHB12                                                                         ------>MYB83                                                                         ------>MYB46(1)                                                                        --------->MYB52(1)                                                 ---------->DOF2       --------->TOE1(2)                                             ---------->DOF2           --------->TOE2(2)                                    --------->ANAC58                  --------->MYB46(3)                 <----------DOF2    --------->ANAC46             <-------TEIL                     <--     ---------->DOF2   ------>ZmHOX2a(1)  >>>>>>>>>TBF1         <-----------ARR10--------->At4g35610   <-------TEIL  <---------DAG2     --------->ANAC58<xxxxxxxxxxxxxxxxsmallRNA(i) <---------At4g35610   tgagattcaaagtctgaaacttttcctactacagaaacaaggaagaagaaagaaagagagagagaggttcttaccaacgattcagaagccgattcaacga  19779300                                  <-----------TGA1                                  <-----------HVH21                    --------->CCA1(2)            --------->CCA1(2)    --------->YAB1    <----------DOF2<---------ARR14(2) <---------ALFIN1  --------->ARR14(2)           --------->YAB1                                     <- ----ZmHOX2a(1)   <------ZmHOX2a(1)            --------->ICU4               --------->GLK1(2) -------   ggaacactttgaagaaacgaggatacaattcgctatcgtcagccatggaatgatgttggaaacgagagagagagagagaatcgaaatgggtttcttagct  19779400                                                                                  <---------------AtSPL8                   <---------TOE2(3)                                         <---------ANAC58                   <---------TOE1(3)                                     --------->At4g35610            <---------TOE1(3)                                            --------->ZAT2            <---------TOE2(3)                                            <---------ZAT2            --           <---------DOF5.7(2)                                           <---------At4g35610       --         --------->ARR11(3)                                        <---------ARR11(3)             <--     <------ZmHOX2a(1) <-------TEIL                                --------->ARR11(3)     --------->MYB52(1) --------ZAT6 --------->TOE2(3)        ---------->DOF2      ---------->DOF2  <---------ANAC58   <---- -->STY1(2)--------->MYB52(1)   ---------->DOF2     --------->CCA1(2)   <-----------RAV1(1)     -----   agtgagaggaagataacgttgaaggttcagagtttaaaggagaaagagagagagaaatgagtcaaagaagacctctgctgcgttcttgtacaaaacagag  19779500        --------->TOE2(3) --------->ZAT14                                                                      <---------ANAC58 --------->ZAT18                                                                <---------WOX13(1) <---------ZAT14                                                               <------------CBF <---------ZAT18    <---------YAB1                                           <---------YAB1    <----- ------------->AtSPL8                                               --------->At4g35610  <---------WRKY18(1) ------------->AtSPL3  <---------YAB1            ----------->GT1    <---------At4g35610<----------DOF2 -------ZAT14   <----------DOF2                 <---------HSFB2a(2)--------->GLK1(2)  <---------ANAC58 -----ZAT14     <---------DAG2     <-----------GT1     ---------->DOF2   --------->GLK1(1)     ------ ---->ZAT14---------->DOF2 <-----------GT1--------->AHL20(2)---------->DOF2  *TSS    <---------MYB46(3)   tactgtactatctcaaagctttatgatttttgcagtttaacccataaattctagtaaaaaagaaaagagaagctgatttctaattggtgcttgacttctg  19779600                                                                               <-----------GT1                                                      <---------MYB52(1) <----------DOF2                                                     <------------------------ANAC81  ------>ZmHOX2a(1)            ------>ZmHOX2a(2)                     ------>ZmHOX2a(1)      <------------------------ANAC81 ----HSFB2a(2)    --------->TOE1(2)          <----------DOF2       <------------------------ANAC81 --->HSFB2a(2)<---------MYB52(1)         <---------CCA1(2)       <-----------GT1     --------->TOE2(3)   aaacttgttttcgatcggtacttacgaatcagagactatttccatctctttcctctgttttttgttttttcatttcttttttttcttcctcattttcatc  19779700                                                                                                 <---                                                                                                 <---                                                                                   ---------->DOF2                                                                            <---------TOE2(3)    ----                                                                   --------->ARR11(3)            ----                     <---------YAB1                                <---------ARR11(3)            <---          --------->YAB1     <---------AHL20(2)         ----------->GT1 <----------DOF2    <---------At4g35610   ttcgtttaacaaaaataactcttatcgttgttaaattgacaaaaaacaataaaccaaaatgttattcaagacctctttaagtttttaaagtgaagctaat  19779800                                   --------->ATHB51                                   <---------ICU4                                   --------->AHL20(2)                                   <---------AHL20(2)                                  --------->ICU4        --------->DOF5.7(2)     --------->YAB1       --------->TOE2(3)        <---------ICU4           --------->ARR14(2) ------AHL20(1)                <---------AHL20(2)        <---------ARR14(2) ------ICU4                    --------->AHL20(2)   --------->ANAC46                               <- ----->ARR11(3)                <---------ATHB51     --------->ANAC58                               -- ----->AHL20(1)                --------->ICU4 --------->MYB46(3)   ------->TEIL            <-------TEIL ------ARR11(3)    <----------DOF2<---------YAB1    --------->ANAC58          ----------->HVH21  ----   attttcaaacgtttacaaatgctttttagataaataattatttatctaacaaacacacaaatactcttgcatctatacaaatgacacagaaaatgcatgc  19779900                                                  <----------ID1                                                  ----------->GT1                                                ---------->DOF2                                             --------->YAB1                                          <---------ICU4                                          --------->YAB1                                         <---------YAB1                                         --------->ICU4                                       --------->YAB1                                       <---------ICU4      --------->GLK1(1)               --------->ICU4              --------->ANAC55(2)    <------ZmHOX2a(1)                 <---------AHL20(2)          <---------ANAC58 ------MYC3             --------->At5g28300 <---------YAB1        <---------ANAC55(1)              <- ----->MYC3            ----------->GT1--------->AHL20(2)          <---------ANAC46               ---- --->TEIL        <---------YAB1       <---------ATHB51            <---------ANAC58        <---------AtLEC2   atgtgaggaattcaatattctaatacagtaaataagagaaataattatcaaaaagaaaaacgaagtttgcgtgttcttctgtttatagatttgaatgaaa  19780000                                                                              --------->ARR11(3)                                                                             <---------CCA1(2)                      <------MYB83                                      <-------TEIL                      <---------MYB46(3)                             <---------ANAC46                      <------MYB46(1)                           <-----------RAV1(1)                     <---------AtMYB61                      --------->MYB46(3)<---------ARR11(3)           --------->ANAC58                                >>>>>>>>>>>>>>>>>LFY  <----------DOF2           --------->ANAC46                         <---------ALFIN1 <---------ANAC58               - --------YAB1  --------->LBD16                     <---------ZAT18   <---------ANAC58              <- ----->YAB1--------->ANAC58                        --------->ZAT18<---------MYB52(1)            <----   catcattctctgcaagccagggattggttctgttttctatggtgagattgtagcccactctatccactgttgcgttcatatatctttcacttcatgttct  19780100  Previous    Next  AGI:  At3g53310.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT3G06160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82372.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 19777642    to: 19779577    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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