Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------MYB46(3)                                                                             --------->LBD16                                                                            <---------LBD16                                                                          <------ZmHOX2a(2)       <--                                                                          --------->CCA1(2)     <----                                                                         --------->ARR11(3)     -----                                                                         --------->AGP1         -----                                                                         <---------ARR11(3)     -----                                                                         --------->ARR14(2)     <----                                                                         <---------ARR14(2)    <-----                                                                        --------->GLK1(1)      ------                                                                     --------->LBD16           <-----                                --------->DAG2                     --------->HSFB2a(2)     <---------YAB1                              ---------->DOF2         <---------TOE2(3)----------->ARR10 --------->YAB1                   ----------->GT1                   ---------->DOF2--------->LBD16--------->MYB52(2)                 ---------->DOF2<---------TOE2(3) --------->TOE2(3)<---------HSFB2a(2)  <---------YAB1   aaactgtttttaagttgacaaaagaaaaaaaaaaaaggttgacattacattacattaaagtatttgactcccgaagatccagggtttgttatgataaata  19768700                                                                                          XXXXXXXXXXX                                                                                          <---------WOX13(1)                                                                                        -------->ATHB1                                                                                        <--------ATHB1        ---------->DOF2                                                                 <------------ATHB5  <<<<<<<<<MYB2                                                                         --------->ATHB12 -------WOX13(1)                     <---------HSFB2a(2)                                <---------ICU4 ----ATHB1                           --------->HSFB2a(2)                               <---------ATHB12 ---->ATHB51                     <---------ANAC58                                      <---------ATHB51 ---->ATHB12                     <---------ANAC58                                      --------->ICU4 --->HAHB4                       <---------ANAC46                           <----------DOF2 -----ICU4                       <---------ANAC55(1) <---------ANAC55(2)   <---------ANAC58 ----ATHB51                     <-----------------------TaNAC69(2)  <----------DOF2    <---------YAB1 --->AHL20(2)           <----------DOF2              --------->ANAC55(2)   <---------ANAC58 ----AHL20(2)           <---------DAG2       --------->AtMYB61    --------->ZAT18   ------------>ATHB5   attggttttcaaaagtatgaaggctactttaagttacttgtagaagaccaatactacgtagtcaaaactgctctaatgcttttcattcaatgattgaacc  19768800                                                                <----------DOF2            <---------AHL20(2)                       --------->YAB1            --------->AHL20(2)                      <---------YAB1         ----------->GT1                            <---------AHL20(2)                   <---------HSFB2a(2)     <---------AHL20(2)                <---------WOX13(1)       --------->TOE1(3)        --------->HSFB2a(2)    --------->AHL20(2)                <------------CBF          --------->TOE2(3)<----------DOF2    <---------AHL20(2)              --------->AHL20(2)  ----------->GT1       <---------ARR11(3)   <---------YAB1               ----------->GT1    --------->AHL20(2)         --------->ARR11(3) XXXXXXXXX>MIR170      ------->TEIL <---------AHL20(2)  --------->YAB1       <---------GLK1(1)   gtgttattaattagttaattagatgtatccaaaacagtttaattgaaaaaacatataatagtaaaactttaaaatttggagttcttttcttctaaaacat  19768900                                                                              <---------HSFB2a(2)                                                                           <----------DOF2                                                                      <---------AHL20(2)                                                                      -------->HAHB4                                    --------->YAB1                    <---------ICU4                                <----------DOF2      <---------AHL20(2) <---------YAB1                            <---------YAB1        ----------->GT1    <---------YAB1                         <---------YAB1<---------GLK1(2)             --------->ICU4                        --------->AHL20(1)      <---------YAB1     <---------ICU4                 <--                      <---------ARR11(3)     <---------MYB52(1)    --------->YAB1                 ---   <------------CBF   --------->AHL20(2)   <---------------AGL15  <---------YAB1 --------->ARR11(3)  --------->ATHB12    <---------AHL20(1)   --------------->AGL15  <---------AHL20(2)          ------- <---------YAB1       --------->AHL20(1)--------->GLK1(2)       --------->YAB1--------->HSFB2a(2) ---   atagttattggagtaaacatccaaaatattatgacttttcatattctgttattagtaaattttgttttataattattcttttagaacttggagacataat  19769000                                                                     --------->TGA2(2)                                                                    <-----------TGA1                                                                    <-----------HVH21                                                                   --------->TGA2(1)                                                                   <---------TGA2(1)                                                                   <---------bZIP60(1)                                                                   --------->bZIP60(1)                                                                   --------->bZIP60(2)                               <---------AHL20(2)                  --------->TGA1a          ----------->RAV1(2) <---------AHL20(2)                   <---------TGA1a  --------->AHL20(2)    --------->YAB1                             <---------O2 -------AHL20(2)     <-------GAMYB                                 --------->O2 ------>AHL20(2)    <---------ANAC46         <-----------GT1    --------->ANAC46 -->AHL20(2)----------->HVH21 <---------AHL20(1)            --------->CCA1(2)  ------>ZmHOX2a(1) -------->TBP <<<<<<<GRF7     --------->AHL20(2)--------->TOE2(3) <-----------STF1      <-----------GT1   ataaataaacaaacctgacatttcgttgataatttttttttttttttaaaccctagttgaagataaacgacgtcagtaatcctctgcgttttactctgtt  19769100                                                        <---------ICU4                                                       <---------YAB1                                                     --------->YAB1                                                    <---------YAB1                                                   <-----------GT1     <---------ARR11(3)                                                  --------->YAB1---------->DOF2                                            <----------DOF2  --------->At4g35610    ----------->HVH21         <----------DOF2                 <-----------GT1--------->YAB1 --------->ARR11(3)        ----   <---------ANAC58 <---------ZAT14     <---------CCA1(2)    <---------At4g35610  <---------ICU4 ----   <---------ANAC58 --------->ZAT14  <----------DOF2<xxxxxxxxxxxxxxxsmallRNA(le3) --------->YAB1 ----   tttgagcttgtctttgttccagttctctgtttcgatgttcttttatctttatttatcatcatcagctaaagaagttctcaagactcatgacctagagaca  19769200                                                              <---------------AGL15                          <---------MYB52(1)                  --------------->AGL15                         <---------MYB52(1)                  <-----------------AGL3                     --------->MYB52(1)                      --------->ANAC46                   --------->ANAC58                          --------->ANAC58                -------- --------->ANAC46  --------->MYB46(3)                      <-----------GT1            --------->CCA1(2) ----->ANAC58      --------->ANAC58              --------->ARR11(3)                   --------->At4g35610 ----->ANAC58      ----------->HVH21         ---------->DOF2 --------->ANAC58 --------->ALFIN1 ----->AtLEC2  <-----------HVH21    <-----------GT1   <---------MYB46(3)   <------ZmHOX2a(1)---------   tgcactcgacctaagatggtcacgaccggtttgttttcttacaacttcaaagacattggtttcactcaatatggagaggaatggggagagatgaaaaagc  19769300                                                                                           --------->GLK1(2)                                                                              --------->ANAC58                                                                              --------->ANAC58                                         <---------TOE2(3)             <---------ANAC58    --------->ARR11(3)                           --------->ANAC46                            <---------ANAC58    <---------                           --------->ANAC58                        <---------ANAC58        <---------ARR14(2)     <---------ANAC58      --------->ANAC58                        <---------ANAC58        <---------ARR11(3)     <---------ANAC58      <----------ID1--------->MYB59           <---------ANAC46        --------->ARR14(2) ->DAG2       <----------DOF2        <----------DOF2          ----------->GT1 ----------->GT1  <----- ->DOF2   <---------At4g35610  ---------->DOF2          <------ZmHOX2a(1)  --------->WRKY18(1) ------   ttatagggcttgagctctttagtccaaaaacgcaaaagtcttttaggtatatcagagaggaagagagtgacttgctggtcaagaaaatttcaaaatctgc  19769400                                                       <---------AHL20(1)                                                       --------->AHL20(1)              <---------MYB52(1)                                                       <---------AHL20(2)             --------->LBD16                                                      --------->YAB1                 <---------HSFB2a(2)                                                  <---------MYB52(1)                 --------->HSFB2a(2)                                                 <---------RAP2.6(3)                 --------->ANAC55(2)                                                 --------->LBD16                     <---------ANAC46                                         <---------ZAT14<---------YAB1           <---------HSFB2a(1)           <---------STY1(1)    <---------DAG2  --------->ATERF1(2)            <---------ARR14(2)           --------->STY1(1)    <----------DOF2 <---------ATERF1(2)            --------->ARR14(2) <-- --ARR10 --------->TOE2(3)     <---------DAG2  <---------LBD16      <---------ANAC58 <---------ANAC55(2) ----At4g35610   <---------ARR14(2)     ------>ZmHOX2a(1)           <---------ANAC58 <---------ANAC58 --->At4g35610   --------->ARR14(2)     <-----------HVH21           <---------ANAC46 <---------ANAC58   tcaaacacaaaccctagtggatttgggaaaaccccttttctccttcactgccggtattatatttagacttgcgtttggacagaacttccgtaagtgcgat  19769500                                                                                        <---------LBD16                                                                                     <-----------HVH21                                                                                  ===================                                   <-----------HVH21                              ===================                                  <---------ZAT6                                  <---------O2                             <---------MYB46(3)        <---------ZAT2             --------->O2  <----                            <---------AtMYB61 ------>MYB46(1)                     <---------TGA1a                         --------->ALFIN1     ------>MYB83                        --------->TGA1a                         <---------MYB46(3)  --------->MYB52(1)                  <---------LBD16<---- -------AHL20(2)      --------->ARR11(3)    --------->AtMYB61                   <---------ALFIN1<----   tttatcgatagggagagagtcgaagagctggtggtagagtcagagaccaacgtaggcaccttggcattttctgacttcttccccacgggtctcggatggc  19769600  Previous    Next  AGI:  At3g53290.1    Description:  CYP71B30P (cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene); oxygen binding. similar to CYP71B8 (cytochrome P450, family 71, subfamily B, polypeptide 8), oxygen binding [Arabidopsis thaliana] (TAIR:AT5G35715.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60733.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 19769135    to: 19770581    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version