Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ANAC58               --------->LBD16              <---------ANAC46             <---------LBD16            <---------ALFIN1                                    ---------            -------->P     --------->ANAC46                                --------->LBD16  <--------            ------>MYB46(1)--------->ANAC58                               ----------->GT1<---------ANAC55(2)            --------->MYB52(1)          --------->AtMYB61         --------->WOX13(1)   --------->YAB1            ------>MYB83  <---------HSFB2a(2)                   <---------WOX13(1)    <---------ATHB12    <---------YAB1        --------->HSFB2a(2)       <-----------GT1       --------->RAP2.6(2) --DOF2    ------>ZmHOX2a(1)           --------->MYB46(3)    <---------AHL20(2)     --------->WOX13(1)   ctcgttatcagtcctaccgggtaatcttctcgcaatcttcgaccacctattgatatacaatatttgattaatcaaaccgcaaaaaacaatcatgtaagta  19730000                                                     ---------->DOF2                                                   ----------->HVH21                                                 --------->At4g35610                      --------->ANAC58                                                 <---------At4g35610                      --------->ANAC46   <-------TEIL                                  --------->ZAT2                           --------->ANAC58  --------->CCA1(2)               <---------------AGL15     <---------GLK1(2)           <---------ALFIN1 ------>AtSPL8                 <-----------GT1   <---------ZAT2                        <---------WRKY12 -------AtSPL8     ---------->ID1 --------------->AGL15   <---------YAB1               <---------WRKY38(1)   caagattcaagggttttttttgtctctcacttgttaccccatagagcatggagctgaaagatgattctctcttcttcttgactcatcggtccacgcttca  19730100                                   <-----------ARR10                            <---------ANAC58                            <---------ANAC58                       <---------DAG2                       --------->TOE2(3)                                    ------->GAMYB                    <---------ALFIN1                                       <---------MYB52(2)                   --------->MYB46(3)           ------>ZmHOX2a(1)          --------->MYB46(3)    <---------ARR14(2) --------->TOE1(3)  --------->ZAT6      <---------ANAC55(2)             -------    --------->ARR14(2) --------->AtMYB61  <---------ALFIN1    --------->ANAC55(2)             -------   gagtcggattcagatagttcatccaccttagcctgcaactcttaccactcctcttcaaacctatacgtatgaacacaacaaacatatatttcggacatgt  19730200                 ----------->HVH21              --------->ARR14(2)    <<<<<<<<<<<<<AGL25                       --------->HSFB2a(2)    <---------------AGL15                   <---------LBD16    --------------->AGL15                  ------->TEIL   ----------------->AGL2                  --------->MYB52(1)   <-----------------AGL1                --------->ZAT14   <-----------------AGL3                --------->ZAT18   <-----------------AG                  <---------ZAT14                ------->GAMYB   <-----------------AGL2           ---------->DOF2        ---------->DOF2   ----------------->AGL3    <---------TOE2(3)--------->ANAC46       --------->MYB52(1) -->AtLEC2     ----------->GT1----------->GT1<---------HSFB2a(2)--------->GLK1(2)          <---------ICU4 ---->GT1    ---------->DOF2 <---------TOE1(3)--------->LBD16  <---------GLK1(2)    ---------->DOF2   aaatttctatttttggaaagtgacacaaaataaggtttcaaagtgtaccggaaactattgctaaagaatcccaacgacgttctcccaaaagactaatgac  19730300                   <<<<<<<<<TBF1             ---------->ID1          --------->SPL7                                                      <----------DOF2         <---------MYB52(1)                                                  <-----------------------        <---------SPL7   --------->ANAC46    --------->ALFIN1             <----------DOF2       <----      --------------->AtSPL3            --------->ANAC46               <-----------GT1      <--------   cttcactagccgttcgtcttcttcttcgagccatggccctctacgaagtgtttcttccttcttaaaatccatttttctttcttttactctgtttctttgt  19730400                                                                                                 <---                                                                                                 ----                                                                                             <-------                                                                                          -----------                                                                                          <----------                                                                                         <-----------                                                                                         <-----------                                                                                         ------------                                                                                         ------------                                                                                         ------------                                                                                         ------------                                                                         --------->ZAT14 <-----------                                                                         ---------->DOF2 <-----------                                                               ======================================             <---------AHL20(2)                                ======================================            <---------AHL20(2)                                 <---------ANAC58         -------------      --------->ANAC55(2)                                      <---------ANAC58         -------------      --------->TOE2(3)                                        --------------->AGL15    <------------    <---------YAB1                                         <----------DOF2              <------------  --------->YAB1                                          <---------ANAC58              <------------ <---------YAB1    ------>ZmHOX2a(1)                      <---------ANAC58      --------->ICU4  ----- -ANAC81<---------AHL20(2)                    --------->ANAC58 <---------------AGL15    <------------ -----ZAT6  --------->AHL20(2)          *TSS  --------->ANAC58 ====================================== --DOF2 --------->AHL20(2)        <----------DOF2    <----------DOF2  ----------->GT1   -------------   gttattatacttaattaaatcctttctaaaattgtgctttgaacttgtaagcatgctttggctttgcttaaatagtaaagtcatgagtttacccaaattg  19730500 -------ID1 ------->GT1 -----CBF ---->AGL15 -----AGL15 ------AGL2 ----AGL15 --->AGL15                                                             <---------ANAC58 ----->AGL1                                                            <---------ANAC58 ----->AG                                                             <-------TEIL ----->AGL2                                                        <------MYB83 ------AG                                                          <------MYB46(1) ------AGL1                                                       --------->MYB46(2) =====MADS_MADS                                                   --------->MYB59 ====MADS_MADS                                                    --------->MYB111(1) ---->AG                                                        <---------MYB52(1) ---->AGL1                                                    --------->MYB59 -----AG                                                      --------->MYB111(2) -----AGL1       --------->MYB52(1)          <-----------GT1  --------->MYB111(1)    <---------ARR11(3) -----AGL2    --------->At4g35610         --------->YAB1      --------->MYB46(2) <---------ANAC58 ------>GT1   <---------At4g35610     ----------->GT1         --------->MYB52(2) --------->TOE2(3) -----AGL3  --------->DAG2         <---------ANAC46         <---------MYB52(1)   <---------ANAC58<--- =====MADS_MADS ----------->HVH21<---------ZAT14           ------------>MYB.PH3(2)   --------->ARR11(3) ---->AGL2 ---------->DOF2       --------->ZAT14    --------->AtLEC2 --------->ARR11(3)------>ZmHOX2a(2)   ggaaaaatgtccaaaaagctgacgaacacaaatagtttagtggataataacatcatgcatcagttagttaggttcttgtttttccttgatctaggtcatc  19730600                                                     --------->YAB1             <---------ICU4                                     <-----------ARR10                          --------->YAB1                                     --------->GLK1(2)                         <---------YAB1                                     <---------ARR11(3) <---------ICU4       --------->YAB1                           <------MYB83 <----------DOF2 --------->YAB1      <---------YAB1                           <------MYB46(1)           <---------ICU4      <---------YAB1        ------                          --------->MYB59    <----------DOF2      <---------YAB1--------->ATHB12 -------DOF2     --------->ARR11(1)  --------->ARR11(3)<---------YAB1    <---------AHL20(2)--------->LBD16   ttttaagttatagattatagatttggattaggttccaagtatctttccttttgaatcatcatcaacttgtgattttttattatcattgtcttcagggatt  19730700                         <-----------GT1                        --------->AHL20(2)                        <---------AHL20(2)                    --------->AHL20(2)                                                ---------->DOF2     --------->YAB1 <---------AHL20(2)                                --------->ARR11(3)  <----------DOF2  <---------AHL20(1)                                 <---------AHL20(1) <---------ANAC58  --------->AHL20(2)                                 --------->AHL20(1) <---------ANAC58  <---------AHL20(2)                                 <-----------ARR10          ---- --->ICU4          --------->AHL20(1)                                 <---------ARR11(3)      -------   atggctttcatcatcttaaaatttaattaactaatctaagtatccaatcgggtttggattttggaatttcaatatcttagggacttaaaaaagaagatag  19730800                <----------DOF2               ------>ZmHOX2a(2)              <---------RVE1(1)              <------ZmHOX2a(2)             <---------ARR14(2)             --------->ARR14(3)             --------->ARR14(2)             --------->AGP1             <---------AGP1             <---------ARR14(3)                                             --------->AHL20(2)             <---------ARR11(3)                                           ----------->GT1             --------->ARR11(3)              --------->MYB52(1)           <---------ANAC55(2)             <-----------ARR10           --------->ANAC46                 --------->ANAC55(2)  --------->CCA1(2) <-----------GT1      --------->ANAC58                --------->MYB59 ------>DOF2<---------CCA1(2)            --------->ANAC58        --------->ATHB12 -->CCA1(2) <---------ARR14(1)   ---------->DOF2                <---------YAB1        <---------ZAT6   aaagagatgaaaccagatcttttttccactcacttaaaagtttaagccaacgaagcactcttaagtatgattagttaagtaaatcccagtgttaagccta  19730900  Previous    Next  AGI:  At3g53200.1    Description:  AtMYB27 (myb domain protein 27); DNA binding / transcription factor. similar to MYB111 (myb domain protein 111), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G46130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81060.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 19729260    to: 19730440    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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