Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ----------->RAV1(1)                                    --------->ANAC46                                  --------->ANAC58                       --------->At4g35610                                  --------->ANAC46                       <---------ZAT2 <---------YAB1                      ------>ZmHOX2a(2)                                  <---------At4g35610 --------               <----------DOF2    --------->ANAC58             --------->MYB52(1)      --------->AHL20(1)           <------MYB83          <-------TEIL                 ------->GAMYB            <---------AHL20(2)           <------MYB46(1)    <---------ANAC55(2)            <---------MYB52(2)        --------->AHL20(2)          <---------AtMYB61   --------->ANAC55(2)            <---------MYB46(2)   --------->AHL20(2)       <---------MYB46(3)--------->ANAC46           --------->YAB1       --------->ZAT2<---------AHL20(1)       <-----------RAV1(1)<-----------HVH21  ---------->DOF2 <------------MYB.PH3(2)  --------->YAB1   ttgcccttgttgttggtcttttgatccccttcacgtacacaacaaaaaaaagaaacatcatcaactaactatctcagcttccaagttaatataatacatc  19703200                                              ------>MYB46(1)                                              ------>MYB83                             --------->ARR11(3)                                  <---------ICU4                             --------->At4g35610                                  --------->ATHB12                  ---------->DOF2    <-----------ARR10                        <-----------GT1     --------->TOE2(3)    --------->TOE2(3)     <---------ARR11(3)                 <-------TEIL    <---------YAB1                  --------->TOE1(3)     --------->GLK1(2)             --------->DAG2 <---------At4g35610          --------->ICU4      --------->ZAT2 <-------- ->ANAC46  ---------->DOF2--------->ANAC46  <---------MYB59    ------->TEIL  <---------At4g35610 <---   acctcataaacttgaaaggtgcatttatacagcacatcattgtaaacctaatatcagtaactatgaaccctaaatcagtagctgagcaaaatctacactt  19703300                               ---------->DOF2                              <---------ICU4                             <---------YAB1                                 --------->MYB46(3)                           --------->YAB1                                 --------->MYB52(1)    <----                       --------->ARR11(3)                        ------>ZmHOX2a(1)              -----                       <---------AHL20(1)                       --------->TOE2(3)               -----                       --------->AHL20(1)                   <---------GLK1(1)                   -----                       <---------ARR11(3)        --------->ANAC46===================================HOX2a_HOX2a       --------->TOE2(3)  <---------YAB1       --------->ANAC46 --------->TOE1(3)  ------>MYB46(1)    <-----------GT1   --------->AHL20(2) ------->GAMYB      --------->GLK1(1)      ------>MYB83 ----- -ALFIN1        --------->TOE2(3)       --------->MYB46(3) --------->ARR11(3)    <---------MYB59----- --------HVH21  --------->TOE1(3)       <---------MYB52(2) <---------ARR11(3)------->GAMYB   <------ZmHOX2a(2)   gtcaattcacctcaaaaacctcaaatatatcattatagctcaacaaactacacaacaacaagatttccttaatcgctaacagacctaatgtctggatcac  19703400                                                                                       <---------TOE2(3)                                                                                      --------->MYB52(1)                                                                                    <---------MYB52(2)                                                                                  ------>NtERF2                                                                                 --------->DEAR3(1)           --------->AHL20(2)                                                   --------->ORA47(2) -----ANAC55(2)            ----------->GT1                                 <---------ARR14(2) ---->ANAC55(2)         <---------At4g35610                                --------->ARR14(2) ---->ANAC55(1)         --------->At4g35610                            <---------HSFC1(1) ---->ANAC46          <-----------RAV1(2)     --------->YAB1           <---------HSFB2a(2) ---->ANAC58        ------->TEIL            <---------ARR11(3)         --------->HSFB2a(2) ---->ANAC58  --------->TOE2(2)  --------->AHL20(2)<---------HSFB2a(2) --------->HSFC1(1) ---------->DOF2   gcaatttcatcaataacatatgaatcagatggcaaaaaattcgcaaaatcataccagaaattgaacatcgtttctagaattcgccgactaacgaaaggaa  19703500                                        <----------ID1                                        <---------ETT(2)                                      --------->ARR14(2)                                      --------->AGP1                                      <---------ARR14(2)                                           --                                 -------->P                                                      ----                                 ------>MYB46(1)                                                 <---           ---------->ID1        --------->MYB52(1)                                        --------->HSFB2a(1)       <---------ANAC58          ------>MYB83      <-----------GT1                         <---------HSFC1(2)       <---------ANAC58         ==============HOX2a_HOX2a<----------DOF2                   <---------HSFB2a(1)  <----------DOF2               ------>ZmHOX2a(1)--------->AHL20(2)                  ---------->DOF2  <---------DAG2          <<<<<<<<<TBF1<------ZmHOX2a(2)*TSS             <---------ZAT14   --------->HSFC1(2)   ttgactttttcttgttctcttgtacttcttcttcctaccagatcgacaaaatttaacaactttacagaaacagagtttacagagtttcaaagaaaattcg  19703600                                <----------DOF2          <---------ANAC58     <---------ANAC58          <---------ANAC58     <---------ANAC46   <---------TOE1(1)       <---------MYB52(1)      <---------ANAC58   <---------TOE2(1)          <-----------GT1 ---->ZmHOX2a(2)  <---------GLK1(2)            <---------ARR14(2)          <---------WOX13(1) ----->ARR11(3)   <---------ARR14(2)           --------->ARR14(2)  <---------TOE2(3)                - ------ARR11(3)   --------->ARR11(3) ---------->DOF2  <------ZmHOX2a(1) <---------YAB1     ----------   atcttctctgtttcgtttcagattttgctacttgcttttaaaaggcccaaatacgaggaggcccatattaagttttgattaacaaaacgtagtcgtttta  19703700                                                                       <---------HSFB2a(2)                                                                       --------->HSFB2a(2)                                                                  --------->At4g35610                                                                  <---------ZAT2                                                                  <---------At4g35610                                                                  <---------HSFB2a(1)                      --------->MYB52(1)                          --------->HSFB2a(1)                     ----------->HVH21                            --------->HSFC1(2)                   --------->ANAC55(1)                            <---------HSFC1(2)                   --------->ANAC55(2)                       --------->ANAC58                   --------->ANAC58      --------->ANAC46    --------->ANAC46                   <---------ANAC55(2)--------->ZAT14        --------->ANAC55(1)                   --------->ANAC58   <---------ZAT14        --------->ANAC58                   --------->ANAC46   <---------REM1(2)     <---------LBD16                  ------->MYC3    --------->ARR14(2)       <---------AtLEC2          ------>ZmHOX2a(1)    <---------ANAC58           <---------ZAT14                      ------ ------>TEIL      <-------MYC3 <---------ANAC58  *TSS     <---------REM1(2)        <---------YAB1 ----------->WRI1--------->ANAC46 <---------ARR14(2)      --------->ZAT14---------->DOF2       <-----   tgcatcgtcgtccttatccacgcgtaacggttcgcgtttctacacagagtcaaatatttctgcacggaagcttcgaaaagaggtcatcaatggagtcttc  19703800                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                             --------                                                 -------->P                                  <-------                                                 ------>MYB46(1)                             <-------                                                 ------>MYB83                                --------                                               --------->TOE1(2)                             --------     <-----------GT1                           --------->AtMYB61                           ---------- <----------DOF2                   <---------ZAT14                               <---------GLK1(2) --->ZAT14            <-----------GT1          --------->TOE2(2) --------->AtMYB61      <-----------HVH21 ----ZAT14      ------>ZmHOX2a(1)  --------->ZAT14      <----------DOF2       <-----------GT1<-------   actcttttctccatcttcctcttcttactcttctctcttcactgcaaaacctacgcgtcttttatcaccaaaacccaaattcacattctccatcagatcc  19703900 ----------->AGL15 -->ZmHOX2a(1) ------------AGL15 >ZmHOX2a(2)                                          <-----------HVH21                             < ->ARR11(3)                                      <------------ATHB5                                -- --GLK1(2)                                       --------->YAB1            --------->ZAT14       <--- --ARR14(2)                                      <---------ICU4            <---------ZAT14       <--- ->ARR14(2)                                      --------->ATHB12        --------->ANAC46       ----- ->AGP1--------->GLK1(1)                        <---------ATHB12--------->ARR14(2)         <--------- ->ARR10                                      --------->WOX13(1)<---------ARR14(2)     --------->SPL7 --ARR11(3)                             <---------GLK1(1)      --------->ATHB12    --------------->AtSPL3   tccattgagaaacccaaacccaaactcgagaccaattcatcgaaatcccaatcatgggtcagtcccgattggctcacaacactcactcgtaccctttcct  19704000                                                                       --------->ZAT18                                                                   <---------DEAR3(1)                                                                --------->TOE1(1)                                                               <---------HSFB2a(2)                                                               --------->HSFB2a(2)                                                               ------>ZmHOX2a(1)                                                               <---------LBD16                                                           ------>ZmHOX2a(2)                                                          <---------GLK1(1)                                                          --------->GLK1(1)                                                         --------->ARR11(3)     --------->MYB52(1)                                  <---------ARR14(2) ------ZmHOX2a(1)          <---------ATHB12              <---------ARR11(3) --------->GT1            ------>MYB46(1)        <-----------RAV1(1)   <---------ZAT18 --------RAV1(2)--------->MYB59         <---------ZAT2   <-----------ARR10 ------LBD16   <-----------RAV1(2)--------->ANAC58   <---------At4g35610 ->ZmHOX2a(1)<-----------HVH21    --------->ANAC58<-----------HVH21<---------TOE1(2)     ------------ -DOF2 <----------ID1     ------>MYB83  --------->ZAT2   --------->ARR14(2)      <-----------GT1   caggaaaaaacgacgagtcaggtataccaatcgcgaacgcgaagctcgacgatgtcgctgatctcctcggaggtgctctcttcttacctctctacaaatg  19704100  Previous    Next  AGI:  At3g53120.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G36680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62968.1); contains InterPro domain Modifier of rudimentary, Modr (InterPro:IPR009851) Range:  from: 19701549    to: 19703556    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g53130.1    Description:  LUT1 (LUTEIN DEFICIENT 1); oxygen binding. similar to CYP97A3/LUT5 (CYTOCHROME P450-TYPE MONOOXYGENASE 97A3), carotene beta-ring hydroxylase/ oxygen binding [Arabidopsis thaliana] (TAIR:AT1G31800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65775.1); similar to putative epsilon-ring carotene hydroxylase [Daucus carota subsp. sativus] (GB:ABB52076.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62979.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cytochrome P450; (InterPro:IPR001128) Range:  from: 19703749    to: 19708520    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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