Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ZAT18        <----------DOF2                                        --------->LBD16      <---------YAB1                                           <---------ZAT14    <---------CCA1(2)              --------->REM1(2)           --------->ZAT14           <---------MYB46(3) ------At4g35610                <---------ANAC58              --------->ANAC46           --------->ABI4(2) ---NtERF2                      <---------ANAC58             <---------LBD16            <---------DEAR3(1) ----->LBD16               --------->RAP2.6(3)            --------->At4g35610           --------->ALFIN1 ----->At4g35610       <----------DOF2             ------>ZmHOX2a(1)--------->ZAT14     <---------AtMYB61 ---->ANAC46           <---------DAG2  --------->At4g35610<---------At4g35610          <---------MYB52(1) ----LBD16   <---------GLK1(2)  <---------ANAC46   --------------------->WRI1         --------->LBD16 ----->WRI1 <---------At4g35610<---------DEAR3(1) --------->TOE2(3) <---------ZAT14 <---------LBD16   gcagtcttatctttagcttctcttgccttatcggccgtgtaatctgcagtttccttagtcttctgcgcagtactgtctctaacctctccggtggtgtctc  19677100                                                         --------->YAB1                           ---                 --------->At4g35610                   <---------ARR11(1)                        ----        ------>NtERF2                                 <---------CCA1(2)           <----------DOF2----     <---------ZAT2                        --------->WRKY45                   <---------ANAC58   <---     --------->ZAT2            ------>NtERF2        --------->RAP2.6(2)       <---------ANAC58  -----     <---------At4g35610     --------->At4g35610  --------->At4g35610   ----------->HVH21 <---------ANAC58     --------->At4g35610     <---------At4g35610  <---------At4g35610   --------->WRKY12  <---------ANAC58     <---------ATERF1(1)  --------->RAP2.6(3)   <-----------RAV1(2)     --------->WRKY38(1)     -----    --------->ANAC46     --------->ARR14(2)--------->WRKY38(1)     <---------At5g28300    <---------ANAC46   <---------LBD16       <---------ARR14(2)--------->WRKY12    <----------DOF2<---------ANAC46  -----   tcatccccgctgccttctccgatgcaatatcggctccctccctcgttgactcagccgtatcatgacttttaccgatgactgcgtctttagttccttgcac  19677200                                                                          --------->bZIP60(2)                                                                          --------->bZIP60(1)                                                                          --------->O2                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC46         --------->DEAR3(1)                                          --------->ANAC55(2)           --   --------->REM1(1)                                                ------->TEIL                   -- --->NtERF2                                                         --------->SPL7                 <- ----->DEAR3(1)          --------->ANAC58            ------>ZmHOX2a(1)<-----------HVH21   <---------ARR11(3) ----->DREB2C(2)         --------->ANAC58       --------->WRKY12<---------------AtSPL3    --------->ARR11(3) ------ALFIN1       --------->ANAC58          <-------GAMYB<---------MYB52(1)    <----------DOF2   <- ---->DEAR4(2)      --------->ANAC58        <------NtERF2 <-------GAMYB   <---------bZIP60(1)     <-- ---->ORA47(2)      --------->ANAC46      <---------MYB46(3)    <---------------AtSPL8   <---------GLK1(1) ---->DEAR3(2)  <-----------HVH21         <---------DEAR3(1)    --------------->AtSPL8   <---------CCA1(2)   cgccttcatcaccgagcctatcaggccaggcctctcaggctcggtcgtcgttgtcctctccgttaatttgtacgtcacatcacctttgttgatatctttc  19677300                              --------->ZAT2                              <---------ZAT2                                    --------->ATHB12      --------->At4g35610     <---------At4g35610           ------>NtERF2      --------->ICU4      <---------At4g35610     --------->At4g35610------->TEIL             --------->bZIP60(1)    <--- ------->ARR14(2)       ------>NtERF2           ------>NtERF2     --------->WRKY12               <--- ------->ARR11(3)    --------->At4g35610        <------NtERF2     --------->WRKY38(1)    <---------ANAC58 --------ARR14(2)    <---------At4g35610      <---------ANAC58   <---------MYB52(1)      <---------ANAC58 --------ARR11(3)    --------->ZAT14          <---------ANAC58  <-------GAMYB  <---------YAB1    <--- -------CCA1(2)      --------->ZAT2    ------>NtERF2     ------>NtERF2 ------>ZmHOX2a(1) <---------ANAC46   aaatcttcagccgctagactcgctgcagcctcagctctctcggccttggcggacctctctgcctcccgttgtcctgatgccatgatttgtttcttgtttg  19677400                --------->CCA1(2)           ---------->DOF2                                                              <---------YAB1        --------->ANAC58                                                               <-----------TBP        --------->ANAC58                                                          ---------->ID1        --------->ANAC46                                                       <----------DOF2  <---------ANAC58                                          <---------TOE2(3) <---------ANAC58  <---------ANAC58        <---------GLK1(2)  --------->ARR14(2)               <---------ANAC46 ------ANAC58  --------->ARR11(3)    <----------DOF2   <---------ZAT6         <---------ANAC58 ------AtLEC2  <---------ARR11(3) <-----------GT1    <---------ANAC46     --------->At4g35610 ------ANAC58--------->ICU4   <----------DOF2<---------ARR14(2)  *TSS     <---------At4g35610   cttggcttccaagtaaagatttaagatggattctttaaactttgccgaatactcgtcgtgttaatgaagcatttagagctgcttgttgtttttatagcaa  19677500                                                             <---------HSFB2a(2)                                                             --------->HSFB2a(2)                                                         <---------ZAT14                                                     <-------MYC3                                                     <-------PIF5                                                     ------->PIF5                                                     ------->MYC4                                                     <-------MYC4                                <---------YAB1       ------->MYC3                              ================================bZIP_DOF                      <-----------TGA1               <-------MYC2                      <-----------HVH21              ------->MYC2                     <---------bZIP60(1)            <---------TGA1a                     <---------TGA1a                --------->TGA1a                     --------->bZIP60(1)            <---------ANAC46                     <---------O2                   --------->O2                     --------->TGA1a                <---------ANAC55(2)                     --------->ANAC58           ------>MYB46(1)                     <---------ANAC55(2)        <----------------PIF3(2)                     ====================bZIP_DOF <------------OsbHLH66                     ====================bZIP_DOF <---------ALFIN1                     --------->O2   ==========================bZIP_DOF                     --------->ANAC46           ------>MYB83 <---------------AtSPL3                     --------->bZIP60(2)        <-----------HVH21                     --------->ANAC58--------->DAG2 <--------ABF1 --------->ANAC58                     --------->ANAC55(2)      --------->TOE1(2)   --------->ANAC55(2)              --------->At4g35610   ---------->DOF2 <---------O2  --------->ANAC58              <---------At4g35610--------->YAB1--------->ANAC46<---------SPL7    <-----------GT1           <---------ATHB12   <----------DOF2----------->RAV1(2)  <---------ANAC55(2)       ------------>CBF--------->TGA2(2)   <---------ARR14(2)<---------------AtSPL8                 -   gtttttggttccaatgagatgccacgtcatgactttgataaagcaaaacctgccacgtgtgttctggtacgcatttttcttattttccaacttatcttcc  19677600                                                         --------->ALFIN1                                                        ------->PIF5                    <---------ARR11(1)                  <-------MYC4                    ------->TEIL                        ------->MYC4                    --------->ARR14(2)                  ------->MYC2                 --------->ANAC55(2)                    <-------MYC3                 --------->ANAC58                       <-------PIF5                 --------->TGA1a                        ------->MYC3                 --------->ANAC46                       <-------MYC2                 <---------O2                          <---------ANAC46                 --------->O2                          <---------O2                 --------->ANAC55(1)                   --------->PIF3(3)                 <---------ANAC55(2)                   <---------PIF3(3)               <---------ALFIN1                        --------->O2             <-----------HVH21  ===================HOX2a_HOX2a             <---------ALFIN1   ------>ZmHOX2a(2)      --------->TGA1a            ----------->HVH21  <------ZmHOX2a(2)       <---------TGA1a            --------->ANAC58  <---------ARR11(3)  --------->ANAC58            --------->ANAC58  --------->ARR14(2)  --------->ANAC46            --------->ANAC46  <---------ARR14(2)  --------->ANAC58            <---------ETT(1)  --------->ARR11(3)  --------->AtLEC2                          <--------    ----------------------->TaNAC69(2)       <---------ARR14(2)                             <--------  <---------YAB1 --------->ANAC58            --------->ARR14(2)                 <---------ZAT2 --------->ARR11(3) <---------ARR14(2)      <------ZmHOX2a(1)          ------->TEIL         <-------- <---------ARR11(3)<---------CCA1(2)      <---------TOE2(3)         --------->AtLEC2      --------->MYB52(1) -------->YAB1<---------REM1(2)====================HOX2a_HOX2a--------->GLK1(1)--------->ARR11(3)   <   aaatatcatttcgcccgacacgtatctaagaagatcgttctattgaggaaccatgccacgtgggattttcatgcatcgagagagcttggacttaacgtgt  19677700                <---------At4g35610                <------NtERF2                --------->ATERF1(1)                --------->At4g35610               <---------DEAR3(2)               <---------ATERF1(1)               <---------RAP2.3(1)                                               <---------ANAC58              <---------DEAR3(1)                                  <---------ANAC46              --------->ETT(1)        <---------------AtSPL3      <---------ANAC58  --------->ANAC58                    <---------------AtSPL8      <---------ANAC58  --------->ANAC58    <---------MYB52(1)<---------SPL7          <---------ARR14(2) -ANAC46     --------->ATERF1(1)     <---------ZAT14            --------->ARR14(2) -ANAC58     <---------ORA47(1)      --------->ZAT14         <---------ANAC58    <---------ANAC58 -ANAC58  <---------AtMYB61  <---------------AGL15 <---------AHL20(2)     <----------DOF2<---------AtMYB61 ------ZmHOX2a(1) ------>NtERF2     <---------ANAC46         <---------ANAC58 <----------DOF2   aaggaagcaattgtggtcggctcccttacttctaaattgtgtagtacgagtattaaaaattgggcgtttcttgtttctttctttcttgtttttggtcgaa  19677800                                        ----------->GT1                 --------->HSFB2a(2)                                       --------->DAG2                   --------->LBD16                            --------->AHL20(2)                        ----------->RAV1(2)                            <---------AHL20(1)                    --------->ARR11(3)               --------->ATHB51       ---------->DOF2          ===================RAV               -------->ATHB1<---------AHL20(2)                ----------->RAV1(1)--------->At4g35610               <---------ICU4--------->ATHB12           <---------ZAT14 ------>ZmHOX2a(1)              <---------YAB1<---------AHL20(2)          --------->ZAT14<---------LBD16     <---------MYB52(1)              --------->ICU4--------->AHL20(1)--------->AHL20(2)  <---------ARR11(3) <-------TEIL   ggctatggaagagaccattattgtctccaatttattggaaaaaagtaagaaaataaactgcagtccaacatctcctggataagtagcttcatcggtattt  19677900                                                           --------->AHL20(2)            <---------DAG2                                                   ----------->RAV1(1)                   <----------DOF2                                           --------->YAB1  <---------AHL20(2)         <-----------GT1   aagaacaaaatcaaatgaacaagttcggaaatagactcaaacgaataaaaatccaacatatataaatgaaaacacatagttatcgatttaactttttata  19678000  Previous    Next  AGI:  At3g53040.1    Description:  late embryogenesis abundant protein, putative / LEA protein, putative. similar to ATECP63 (EMBRYONIC CELL PROTEIN 63) [Arabidopsis thaliana] (TAIR:AT2G36640.1); similar to BP8 [Betula pendula] (GB:CAA79329.1); contains InterPro domain Late embryogenesis abundant protein (InterPro:IPR004238) Range:  from: 19675652    to: 19677465    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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