Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------AHL20(2)                                           --------->At4g35610   <---------HSFB2a(1)                     <---------At4g35610   <---------HSFC1(2)                  <-----------TGA1   --------->HSFC1(2)                  <-----------HVH21   --------->HSFB2a(1)                 --------->TOE2(3) ---At4g35610                         --------->TGA1a -->At4g35610                         --------->ANAC58 ---->RAV1(2)                         --------->bZIP60(2) -->ZAT2                              --------->ANAC58                       <---------ZAT6    ------ ---ZAT2                 --------->ANAC55(2)  --------->AHL20(2)        --------->TOE2(3)      <----- ---RAV1(2)<---------CCA1(2)          --------->O2     --------->At4g35610   ----------->GT1---------   gaagaagtttcccatctctacatatatatgtaacatagaaacgtcagattaaatatcagcaaaaacaacttcaacattagagtgaataagtcttgtcctt  19629000                             >>>>>>>>>TBF1                          >>>>>>>>>TBF1                 --------->ANAC58                 <----------ID1                   --------->TOE1(2)                    --------->ANAC58              <-----------RAV1(2)                   <---------LBD16                <------ZmHOX2a(1)                  <-------TEIL                --------->ARR14(2)               --------->At4g35610              <------MYB83 >ZmHOX2a(1)    <---------ARR14(2)               <---------At4g35610              <------MYB46(1) -----DOF2     <------ZmHOX2a(1)               <-----------RAV1(2)       <------ZmHOX2a(1)   -------- ->ID1       <---------TOE2(3)  >>>>>>>>>TBF1<-----------HVH21  ---------->DOF2 --------->ALFIN1   ttaaaacaacttactgaggaacctggaagaagaagaagaattagaagagtcaggagagaagcaagagaaagaagaggaagaagtgggttcagggacaaag  19629100                  --------->At4g35610                 ----------->RAV1(1)               --------->At4g35610               <---------ZAT2               --------->ZAT2               <---------At4g35610              ----------->RAV1(1)             <------NtERF2             <-----------RAV1(2)             ================RAV            --------->At4g35610            --------->LBD16           ----------->RAV1(1)           --------->DEAR3(1)                                                 <---------ZAT2           --------->RAP2.3(2)                                                --------->At4g35610          <------NtERF2                                                       --------->ZAT2          --------->RAP2.3(1)                                                 <---------At4g35610          --------->ATERF1(1)                                                ----------->RAV1(1)         --------->At4g35610                             --------->DAG2      ========================         <---------ATERF1(1)                      ---------->DOF2   --------->TOE2(3)        --------->ARR14(2)                --------->ARR14(2)      --------->ARR11(3)       <------ZmHOX2a(1)                  --------->GLK1(2)       <---------ARR11(3)         --------     --------->ALFIN1                     <---------ARR14(2)     <---------GLK1(1)           -------- <------ZmHOX2a(1)<---------At4g35610     ------->TEIL  ---------->DOF2--------->MYB52(2)    ======== -->DOF2<---------ARR14(2)               <---------GLK1(2)       <---------CCA1(2)           <-------   agaggaagaggagccgcagcagcagaagtagcagtttgggactgaatctgatcaaagaaaaagtttgatatcttagttgcagcagagccttgttcttctg  19629200         <---------At4g35610         <---------ZAT2         --------->At4g35610      <---------At4g35610      --------->At4g35610     <-----------RAV1(1)                  --------->AtLEC2 ====RAV --------->ZAT2                   --------->ANAC46 --->RAV1(2)                           <-------TEIL ->At4g35610                  <---------At4g35610                                                   < ================RAV          --------->At4g35610                                                <--- --At4g35610                  <-------GAMYB     ---------->DOF2           ---------->DOF2        ----   actcattctgctgctgacttctccattgtttcagttgcaagtccatggaacaaagagagagtgagtgagagagagagaaagagagacagacagagaaatg  19629300       <----------DOF2      <---------ANAC58      <---------ANAC46      <---------ANAC58   <--------P  <-------GAMYB  <---------ANAC58  <---------ANAC58 --------->MYB55(2)                                                            ----------->RAV1(1) --------->MYB52(2)                                                         --------->AtMYB61 <---------MYB46(3)                                                ---------->DOF2 <------MYB83                       <----------DOF2             --------->ANAC58 <------MYB46(1)              <---------ALFIN1                  --------->ANAC58   ---------->DOF2 ---------AtMYB61        <---------At5g28300             <---------ANAC58   ------->GAMYB --------RAV1(1)         <-----------GT1                 <---------ANAC58   --------->TOE2(3) ----->ALFIN1           <-----------GT1            --------->GLK1(2)       --------->MYB46(3)   tgttggttgcttttgggatagtttttttaccctcacttcttttgtttttagagagtctggcttaataagcaaagacaaccacaacaaaagtcttatttgt  19629400          --------->AHL20(2)        --------->AtLEC2        <---------ANAC55(2)        ----------->GT1               <<<<<<<<<TBF1                                             <----    <-----------HVH21          <---------DAG2                                                   <---- <---------ANAC46          *TSS<----------DOF2                                             --------->ANAC58 <---------ANAC58       --------->AHL20(2)     <----------DOF2        --------->DAG2       --------->ANAC58 <---------ANAC58      --------->AHL20(2)--------->ZAT14             ---------->DOF2  <----------ID1   ttggcttgtcatgtaaatacccaaaataaaaaactttttcttcttcactcttttgttagagagagctagagaaaagtgtttagactatgagacaagacag  19629500                                       ----------->GT1                                       <------MYB46(1)       --------->ANAC55(2)                                   --------->ATHB12      <---------DAG2                               --------->ATHB12<---------AHL20(1)                              <---------AHL20(2)         <----------DOF2     <---------YAB1                         <---------AHL20(1)    --------->AHL20(2)            <---------ANAC55(2)    <------ZmHOX2a(1)    <---------AHL20(2)    --------->AHL20(1)            --------->ANAC55(2)   ----------->GT1      --------->YAB1 <------MYB83   <-----------GT1   <---------ICU4 ---GAMYB              <---------AHL20(2)      <---------AHL20(2)      --------->ICU4               - -----At4g35610  ----------->GT1 <---------WOX13(1)----------->GT1    <---------AHL20(2)    ---------   ttgataggataaacaaaattagtatataatatttgattgataggtttaataaattgttactttatgtgatataaaaattatgtaagtcagaaaacaaaga  19629600                                                                                                    -                                                                     <-----------GT1        <--------  --------->ANAC58--------->At4g35610                     <---------ANAC58                 <---------AHL20(2)  --------->ANAC58<---------At4g35610--------->ZAT14      <---------ANAC46        <-----------GT1   - --------->DOF2 <-----------RAV1(2)  <---------ZAT14      --------------------->WRI1 --------->TOE2(3) ->DOF2        <-------TEIL       ----------->RAV1(2)     <---------ANAC58  <----------DOF2--------->AHL20(2)   gagaaagcactgcaagatgcagatggagagatagtaacctgcagtgtttatgtctcactgccttggaaatatcacttcctttttttacctcattttaata  19629700            ---------->DOF2            <---------YAB1        ----------->GT1             <---------YAB1               <---------AHL20(2)        <------MYB83          <---------ARR11(3)            <-------TEIL        <------MYB46(1)       --------->ARR11(3)       <---------TOE2(3) <---------REM1(1) ------>ZmHOX2a(1)           --------->YAB1            <---------TOE1(3) <---------ANAC46 <---------DAG2 -------->TOE1(3)           <---------YAB1       <---------YAB1 --------->AHL20(2)  --------->TOE1(3) ---GT1--------->MYB59    --------->YAB1  <---------YAB1 <------ZmHOX2a(1)    <---------ZAT6 -------->TOE2(3)--------->CCA1(2)----------->GT1<---------AHL20(2)<---------TOE2(3)--------->TOE2(3)   ttccttaagtaggttaaagagatgcctattatgatattgttattatgtttttttattaaggattcatttaatgtgatgtagagtaaccttcaatttttgt  19629800                                                                    --------->ATHB12                                                                    <---------ICU4                                                                    <--------HAHB4                                                                   <---------ATHB12                                                                 --------->YAB1                                                               <---------YAB1                                                            --------->ICU4                                                          --------->YAB1      <-----------HVH21                     --------->GLK1(2)--------->ATHB12   <---------At4g35610    <---------ZAT6   <---------GLK1(2)<---------YAB1   cttacagatgtcatttgtctcagagattgtgttacaaatgtatgagattctaacttctaagcatgattaatcatttgggttttgactaaatagtctccat  19629900  Previous    Next  AGI:  At3g52910.1    Description:  AtGRF4 (GROWTH-REGULATING FACTOR 4). similar to AtGRF3 (GROWTH-REGULATING FACTOR 3) [Arabidopsis thaliana] (TAIR:AT2G36400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66216.1); contains InterPro domain QLQ (InterPro:IPR014978); contains InterPro domain WRC (InterPro:IPR014977) Range:  from: 19626999    to: 19629427    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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