Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
------>
ZmHOX2a(2)
--------->
CCA1(2)
--------->
At4g35610
<------
ZmHOX2a(2)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
-----
<---------
ARR11(3)
<---------
AtLEC2
<---------
AGP1
<---------
HSFB2a(2)
--------->
AGP1
------>
ZmHOX2a(2)
--------->
GLK1(1)
<---------
AGP1
<---------
GLK1(1)
--------->
ARR11(3)
------>
ZmHOX2a(2)
<---------
ARR14(2)
<------
ZmHOX2a(2)
---------->
DOF2
--------->
ARR14(2)
-------->
ARR11(3)
--------->
ATHB12
<---------
GLK1(2)
---------
ARR14(2)
<---------
WOX13(1)
--------->
LBD16
<----
---------
ARR11(3)
------->
TEIL
--------->
ATHB12
--------->
GLK1(2)
<---------
HSFB2a(2)
-------->
ARR14(2)
<---------
CCA1(2)
<---------
YAB1
<------
ZmHOX2a(1)
--------->
HSFB2a(2)
aagatcggaccagagagatctgaatctttgtgaacagtctgattgattcgaaaaggattgagaatcgatctagttttcttccagatttgatctggatgga
19565400
---
---
<--
----
----
<---
----
----
-----
-----
-----
<----
-----
--------->
LBD16
----
<---------
ANAC46
----
<---------
ANAC58
----
<---------
ANAC58
----
--------->
KAN4(2)
<-----
<---------
MYB46(3)
------
---------->
DOF2
--------->
PCF2
<---------
At4g35610
--------->
PCF5
--------->
At4g35610
--------->
At4g35610
<----------
<---------
At4g35610
<-----------
RAV1(2)
<-----------
HVH21
<-
--------->
TOE2(3)
<-------
TEIL
<---------
KAN4(1)
--------
---->
ARR14(2)
------>
ZmHOX2a(1)
---------->
DOF2
--------->
HSFB2a(1)
------
-----
ARR14(2)
---------->
DOF2
------>
ZmHOX2a(1)
------>
ZmHOX2a(1)
<---------
REM1(1)
--------->
HSFB2a(1)
taccgagttcgtcgagtaaaggctcctcatcctcaaacgaagcagagactcctctaccgaaagatgcagatgaagcgattgttccgtcgaatggtcccgc
19565500
<---------
ANAC46
--------->
ATERF1(1)
<---------
LBD16
<------
NtERF2
<---------
ERF1
<---------
RAP2.3(1)
<---------
RAP2.6(1)
<------
MYB46(1)
<---------
ATERF1(1)
<------
MYB83
<---------
DEAR4(2)
--------->
MYB46(2)
------>
NtERF2
--------->
MYB111(1)
<---------
RAP2.3(3)
--------->
MYB111(2)
--------->
DEAR3(1)
<---------
MYB46(3)
<---------
ATERF1(2)
<--------
P
<---------
RAP2.6(2)
<---------
MYB55(1)
--->
NtERF2
<---------
RAP2.3(2)
<---------
ANAC46
------>
LBD16
<---------
At4g35610
<---------
MYB46(3)
-------
RAP2.6(3)
--------->
MYB55(2)
----->
RAP2.6(2)
--------->
MYB111(2)
----->
RRTF1(2)
<---------
AtMYB61
------
ATERF1(2)
===============
MYC_MYB
----->
DEAR3(1)
=================
MYC_MYB
----->
ATERF1(2)
------>
ZmHOX2a(2)
<---------
ANAC58
---->
RAP2.3(1)
<------
ZmHOX2a(2)
<---------
TGA1a
---->
ATERF1(1)
<---------
ARR14(2)
<---------
O2
---->
RAP2.6(3)
<---------
ATERF1(1)
<---------
bZIP60(2)
--
NtERF2
<---------
DREB2C(2)
--------->
O2
---->
ERF1
<---------
DEAR3(1)
<---------
ANAC46
<---
----->
RAP2.3(2)
--------->
ARR14(2)
----------->
HVH21
-------
----->
DREB2C(2)
<------
NtERF2
<---------
WOX13(1)
<------
----->
RAP2.3(3)
--------->
ATERF1(1)
<---------
ARR14(2)
--------->
ALFIN1
----->
RRTF1(3)
<---------
MYB46(3)
--------->
ARR14(2)
<---------
ANAC46
----
ATERF1(1)
<---------
DEAR3(1)
<------
ZmHOX2a(1)
--------->
At4g35610
--->
LBD16
<---------
RRTF1(2)
<---------
At4g35610
<-------
GAMYB
--------->
ALFIN1
-
HVH21
<---------
RRTF1(3)
=========================
bZIP_DOF
--------->
ZAT2
-----
NtERF2
<---------
ORA47(2)
<---------
REM1(1)
--------->
ALFIN1
<---------
At4g35610
->
ATERF1(1)
<---------
RRTF1(1)
---------->
DOF2
---------->
DOF2
<---------
ANAC58
<------
ZmHOX2a(1)
<
>
NtERF2
<---------
ABI4(1)
========================================
bZIP_DOF
<---------
ZAT2
<-
cggcattgaaacggcggcggatccgatttcaaatggaatgaaagggattgaagatgaagcggaggattgacgtggtggttggtaaggagctgtgggaact
19565600
<---------
At4g35610
<------
NtERF2
--------->
HSFB2a(2)
<---------
LBD16
<---------
HSFB2a(2)
<---------
ANAC46
===================
<------
NtERF2
<-----------
TGA1
<---------
At4g35610
<------
NtERF2
------>
ZmHOX2a(1)
--------->
At4g35610
--------->
LBD16
--------->
MYB52(1)
=============================
<<<<<<<<<
MYB2
<---------
MYB46(3)
--------->
MYB46(3)
<---------
ARR11(3)
<-------
GAMYB
------>
NtERF2
<------
NtERF2
--------->
GLK1(2)
------
DEAR3(1)
--------->
ALFIN1
<---------
MYB46(3)
--------->
ARR11(3)
<
-->
GLK1(1)
----------->
HVH21
--------->
ALFIN1
<---------
ARR14(2)
--------->
TOE2(3)
---
GLK1(1)
<---------
DEAR3(1)
<---------
ANAC46
--------->
ARR14(2)
<---------
GLK1(2)
---------
DEAR3(1)
--------->
ATERF1(1)
<-----------
RAV1(1)
----------->
GT1
------>
ZmHOX2a(1)
<
-----
NtERF2
<---------
LBD16
------>
ZmHOX2a(2)
-------->
P
----------->
GT1
===================
cggcgttgctgaacatttgcggtggccggagatgatccactggtggggaaaacaaccggtggaattggaaaatccttcgtcat
cctctagaatccctaat
19565700
--------->
HSFB2a(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
GLK1(1)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ARR14(2)
--------->
ARR14(2)
--------->
ANAC46
<---------
AGP1
<-----------
RAV1(2)
--------->
AGP1
<---------
HSFB2a(2)
--------->
ANAC58
=========
HOX2a_HOX2a
--------->
AHL20(2)
--------->
ANAC58
========
HOX2a_HOX2a
----------->
GT1
----------->
HVH21
<-------
---------
CCA1(2)
<---------
GLK1(1)
<---------
ICU4
------>
NtERF2
*
TSS
---------
At4g35610
--------->
ARR14(2)
<---------
AHL20(2)
--------->
ANAC46
========
HOX2a_HOX2a
<---------
ZAT6
<---------
ARR14(2)
<---------
ATHB51
<---------
ATERF1(1)
tcagatctcgaatttgaagttagtgttttctctcaatcggatttgatttcagaaattgaaaataattccagtaacaggcgactactacgc
attcttcgtg
19565800
<---------
ARR14(2)
<---------
TOE2(3)
<-----------
ARR10
--------->
YAB1
<---------
ARR11(1)
<---------
ICU4
<---------
TOE1(2)
--------->
AHL20(2)
--------->
ARR14(2)
<---------
AHL20(2)
------->
TEIL
<---------
ANAC55(2)
----------->
GT1
<---------
ARR14(1)
<--------
P
--------->
YAB1
<---------
CCA1(2)
<----------
DOF2
--------->
AHL20(2)
<----------
DOF2
---------->
ID1
--
ANAC46
--------->
ANAC55(2)
<---------
MYB52(1)
<---------
ANAC46
<---------
MYB52(1)
--
ttcgtatcttcgtgatatgtgataagggcattttcggtaagtgaattaataatgttttgggccgtataaggctttatcagcccattagtttgtagttttg
19565900
<---------
TGA1a
<---------
AHL20(2)
<---------
O2
--------->
AHL20(2)
--------->
O2
<---------
AHL20(2)
--------->
TGA1a
----------->
GT1
===============
MYC_MYB
--------->
YAB1
<---------
ALFIN1
<---------
TOE2(3)
--------->
PCF2
-------->
HAHB4
------------>
CBF
<---------
ICU4
<----------
DOF2
--------->
ANAC58
----------->
GT1
--------->
ICU4
=======================================
bZIP_DOF
<-----------
GT1
<---------
YAB1
<
------->
MYB46(3)
--------->
ANAC58
<-------
GAMYB
--------->
ZAT6
--------->
YAB1
-
aacagcctttgctacacaaacaagtcaatagccccacttgtgagttgtgaatagttttcactactgactaattatcgtaattttataagttattaggctc
19566000
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
----------->
HVH21
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(le3)
<-----------
HVH21
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(le3)
<-----------
HVH21
xxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxx>
smallRNA(se3)
----------->
RAV1(2)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
--------->
LBD16
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
--------->
ANAC46
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
LBD16
xxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
--------->
ICU4
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(fl3)
<--------
P
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
=============================
MYC_MYB
xxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
<---------
ZAT6
------>
NtERF2
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
ZAT14
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
<---------
ZAT14
xxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
--------->
LBD16
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
ANAC46
xxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
--------->
LBD16
xxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
--------->
ANAC46
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
LBD16
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
O2
--------->
LBD16
xxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
TGA1a
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
TGA1a
xxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
<---------
LBD16
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(l2)
xxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
=======================================
MYC_MYB
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
xxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
O2
--------->
LBD16
<---------
ATERF1(1)
xxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
--------->
MYB52(1)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxx>
smallRNA(le3)
<------
NtERF2
xxxxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
--------->
LBD16
<------
ZmHOX2a(2)
xxxxxxxxxxxxxxxx>
smallRNA(si3)
----------->
HVH21
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
*
TSS
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
LBD16
------>
NtERF2
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxx>
smallRNA(se3)
------->
GAMYB
xxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(s2)
---------->
DOF2
xxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
==================================================
bZIP_DOF
--------->
ARR14(2)
<---------
AHL20(2)
---------
ZAT14
xxxxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(i2)
<----
-------->
ZAT14
xxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
AHL20(2)
actgaacaacaaa
gtcgttgtagtatagtggtaagtattcccgcctgtcacgcgggtgacccgggttcgatccccggcaacggcg
attttttatttttta
19566100
--------->
ANAC58
--------------->
AGL15
--------->
ANAC58
----------------->
AG
--------->
ANAC55(1)
<-----------------
AGL2
--------->
ANAC55(2)
----------------->
AGL1
--------->
ANAC58
<-----------------
AG
<---------
ANAC55(2)
----------------->
AGL2
--------->
ANAC46
<-----------------
AGL1
--------->
ANAC58
<-----------------
AGL3
<---------
ICU4
----------------->
AGL3
<---------
YAB1
<---------
ZAT18
---------->
DOF2
--------->
YAB1
--------->
YAB1
<---------------
AGL15
----------->
GT1
--------->
ICU4
-----------
-------
GT1
------>
ZmHOX2a(1)
--------->
YAB1
<---------
ATHB12
--------->
YAB1
aacctatagtagtgtccttaccattttttgaaagtcatttagaatttgtataaattgtaagagcaatgatcaatacgtaagtcatttagaatttgtataa
19566200
<---------
TOE2(2)
<---------------------
WRI1
<---------
ANAC55(2)
<----------
DOF2
--------->
YAB1
<---------
ICU4
<----------
DOF2
--------->
TOE2(3)
<---------
YAB1
<---------
ANAC58
--------->
TOE2(3)
--------->
YAB1
<---------
ANAC58
--------->
YAB1
---
--------->
ICU4
---------->
DOF2
<---------
YAB1
--------->
WOX13(1)
<---
>
GT1
<---------
ATHB12
<---------
AHL20(2)
<-------
TEIL
<----------
DOF2
<----------
DOF2
----
attgtaagagcaatgatcaatacgtagatttattcaaagttgcctttctgatgttcatgatacttctttttctatcaatcttagctttcttaatttgcaa
19566300
Previous
Next
AGI:
At3g52760.1
Description:
integral membrane Yip1 family protein. similar to integral membrane Yip1 family protein [Arabidopsis thaliana] (TAIR:AT2G36300.1); similar to unknown [Populus trichocarpa] (GB:ABK93663.1); contains InterPro domain Yip1 domain (InterPro:IPR006977)
Range:
from: 19564657
to: 19565790
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At3g52765.1
Description:
pre-tRNA. tRNA-Asp (anticodon: GTC)
Range:
from: 19566014
to: 19566085
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version