Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             ----------->RAV1(2)                                                          ------>NtERF2                                                         --------->ATERF1(2)                                                         --------->RAP2.3(2)                                                         --------->DEAR3(1)                                                         <---------ATERF1(2)                                                       <---------At4g35610                                                       --------->At4g35610                                                      <-----------RAV1(1)                                                      =================RAV                                                   --------->GLK1(2)                                              --------->TOE2(3)       --------->GLK1(2)                    <---------WOX13(1)        --------->YAB1         <---------GLK1(2)           <------ZmHOX2a(1)                 --------->MYB46(3) --------->ARR14(2)            -------         <---------TOE2(3)   --------->GLK1(2)------->GAMYB<------NtERF2 <----------DOF2   <---------At4g35610 ---------GLK1(2) <---------WRKY18(1)      --------->WOX13(1)   <---------ARR14(2)         --------->At4g35610 ------WOX13(1) <---------WOX13(1)       ---------->ARF1--------->RAP2.3(1)            <---------DEAR3(1)   tggattcttctaaggaagattgactgatgctaatctatctcttgtcaaccaaaattctgccgcctgaatccgattctttgacaatagagtcgctgctaaa  19521000                                                         --------->ZAT14                                                         <---------ZAT14                                                     --------->ZAT6                                                     --------------->AtSPL3                                                     --------------->AtSPL8                                                  ----------->HVH21                                                --------->ANAC55(2)                                                <---------ANAC58                                                <---------ANAC58                                                <---------ANAC55(2)                     --------->ANAC46         <-----------GT1                                    <---          <---------ZAT6                  <---------ARR11(3)                       <---------CCA1(2) --->DOF2 ----------->GT1                 --------->ARR11(3)                     --------->YAB1<-----   gagctatctatagtgtaaaatccaaaccatctatatgaataagagatattacttgacagtactcttcaaggctatctatagaatcatatcgttcaaactg  19521100                               <---------YAB1                --------->ZAT2                              <----------DOF2                <---------ZAT2                    <---------TOE1(2)                        --------->At4g35610                 <---------ANAC46                            <---------At4g35610      ---------->DOF2      <-----------GT1           <-----------RAV1(1) ------MYB52(1)  <---------ANAC58                 <---------ARR14(2)           ----------->GT1 ------RAV1(1)   <---------ANAC58 <---------YAB1  --------->ARR14(2)       <---------AtLEC2   ttgtttcttaaagagcatctcgtgtgttttatctttattaatctacattccatatatgttgcaagctgagtgagtatgcatgagtaaaacaaatagttcc  19521200                                              --------->AHL20(2)                                           --------->TOE2(3)                                   <---------ICU4                                   -------->ATHB1                                   --------->AHL20(2)                                               -                                   <---------AHL20(2)                                              <-                                   --------->ATHB12                                         ---------                                   <--------HAHB4                                          --------->ANAC58                                   --------->ATHB51                                        --------->ANAC58                                  <---------ATHB51                                         ----------                                  <---------ATHB12                                    --------->ANAC58      <----------DOF2             --------->ICU4                                      --------->ANAC58     <---------DAG2      --------->AHL20(2)--------->TOE1(3)----------->GT1 ----------------->AGL1 --   acttaaaccttttccaaaaaaccaaaaaaaaatccaattatttgaccttaaaatatagggagaggtttatatagtattgcctaaacgtgagcaacgtaaa  19521300                                                                                           <---------                                                                                           <---------ARR11(3)                                                                                           <---------ARR14(2)                                                                                   <-----------HVH21                                                                                  --------->bZIP60(2)                                                                                  --------->ANAC46                                                                                  --------->ANAC58                                                                                  <---------bZIP60(1)                                                                                  --------->bZIP60(1)                                                                                  <---------ANAC55(2)                                                                                 <-------TEIL XXXXXXX                                                                             --------->DAG2------->TEIL                                                               --------->ANAC55(1)--------->ANAC55(2)     --------->ANAC58                    <---------WOX13(1)    --------->ANAC46  --------->SPL7     --------->ANAC58                    <--------P--------->LBD16           <---------------AtSPL8 --------->DOF2                         <-------GAMYB   <---------ICU4       <---------------AtSPL3 --------AHL20(2)                      <------MYB46(1) --------->ICU4      ========================== >TOE2(3)    <-------TEIL   <---------ICU4        ----------->GT1          ---------->DOF2 --------->ARR14(2) ->GT1----------->GT1     <---------ARR11(3)     <---------LBD16     ------->GAMYB--------->ANAC58--- ------->AHL20(2) ---------->DOF2      <------MYB83----------->GT1--------->MYB52(1)      <---------CCA1(2)   attaaagacgctaaattcgtaaatgcaaaatcatttctatttggttgataaaccggaaaaattacacttaaccgagtaaaaggtacgtcactgtatcttc  19521400               ------------>CBF               <<<<<<<GRF7            <---------MYB111(1)           <---------At4g35610           --------->At4g35610           <---------TGA1a           <---------ZAT2           <---------O2           --------->O2           ----------->RAV1(2)           --------->TGA1a           --------->ZAT2          ------>MYB83          --------->MYB52(1)          -------->P          ------>MYB46(1)           --------->ARR11(3)         <---------ALFIN1           <---------ARR11(3)        --------->MYB46(3)    ----------->GT1                                                       <      <-----------GT1     --------->CCA1(2)                                                     -----     <-----------GT1--------->AHL20(1)       ------------------------>ANAC81                    -----  <---------ICU4    <---------ARR11(3)--------->TOE1(3)                                      -------- --ARR10<---------MYB59<---------YAB1 --------->TOE2(3)                                 --------->ICU4 XXXXXXXXXXXXX>MIR865-3P*TSS  --------->ANAC58        ----------->GT1                   <---------YAB1 ====================bZIP_DOF --------->ANAC46       --------->DAG2                --------->YAB1   - ------>LBD16----------->HVH21--------->ANAC58      ---------->DOF2       <----------DOF2--------->ATHB12   cccatatttacccacctgacaatatatgatacaagtaaaatcttaaaatcccaaaaaagtgaaaacaatctctcttctttctcaaggataatgagtgagc  19521500                                                                           <-----------RAV1(2)                                                                         <---------ALFIN1                                                                        --------->ATERF1(1)                                                                        <------NtERF2                                                                       <-----------HVH21                                                                       --------->RAP2.6(2)                                                                       <---------ATERF1(1)                                                                       <---------DEAR3(2)                                                                       <---------ORA47(2)                                                                       <---------RAP2.3(1)                                                                       ------>NtERF2                                                                      --------->ATERF1(2)                                                                      <---------RAP2.3(2)                                                                      <---------RAP2.3(3)                                                                      <---------DEAR3(1)                                                                    <---------ERF1                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                     <---------ARR14(2)             <---------RRTF1(1)                                     --------->ARR14(2)            <---------RAP2.3(3)                                  <---------TOE1(2)                <---------RRTF1(2)                             <-----------HVH21                     <---------RAP2.3(2)                            --------->TGA1a                        <---------DEAR3(1)                            --------->O2              --------->ZAT14 <---------ATERF1(2)                       <---------ETT(1)           <---------MYB46(3)<---------RAP2.3(1)             <---------ARR14(2)  <------NtERF2    --------->ALFIN1 --------->ATERF1(2)             --------->ARR14(2)<---------DEAR3(1) <-----------RAV1(1)<------NtERF2     <------NtERF2        --------->ANAC58    <---------TGA1a     <---------ZAT2    --------->RAP2.6(3) <---------RAP2.6(3)      --------->GLK1(1)----------->HVH21        --------->At4g35610<---------ATERF1(2)------>NtERF2   <---------------AtSPL8   <---------O2        <---------At4g35610<---------RAP2.6(2)<-----------HVH21 ---------ARR14(2)    --------->DEAR3(2)        --------->ZAT2   --------->MYB52(1)  --------->DEAR3(1) ------------>AG      --------->MYB46(3)        ----------->RAV1(2)<---------RRTF1(3)--------->RAP2.3(3) ------------>AGL1 <---------WRKY18(1)     --------->REM1(2)    ----------->HVH21    --------->ANAC46 ->ZAT18--------->ANAC58   --------->MYB46(3)<---------ZAT14   <---------WOX13(1)   --------->RAP2.3(1) -------->ARR14(2)----------->HVH21 <------ZmHOX2a(1) <---------ZAT14--------->ATERF1(1)   caaatcgggtacccaaatccatgacccgacccgtcggaggaaccgagtacagctggtgcagagcgattgacggcggcacaggtatcgccgtcatagctct  19521600                                                                    <---------ALFIN1                                                                  <---------ALFIN1                                                                 <---------ZAT18                                                               ------>MYB46(1)                                                               ------>MYB83                                                               --------->ANAC46                                                               --------->ANAC58                     -                                                               --------->ANAC58                     <                                                             --------->AtMYB61                  <----                                                             <---------ALFIN1                   -----                                                            --------->MYB46(3)                  -----              --------->AtMYB61                        <---------ARR14(2)                    --------       --------->LBD16                  --------->ANAC46   <---------At5g28300               --------      --------->HSFB2a(2) --------->ARR11(3)           --------->ARR14(2)                    --------      <---------HSFB2a(2) <---------ARR11(3)      ----------------------->TaNAC69(2)   <---------MYB52(1)  <----------DOF2        <---------GLK1(2)<---------ETT(2)<-----------GT1        --------->MYB46(3) -   cttactttcccgaacaccaaaactccaaaatctccaaaataccctcgacaaactccagatttaccaccccactctccgttccaacatccgtttcgacgca  19521700                                     --------->ARR14(2)                                     <---------ARR14(2)                                     <---------GLK1(2)                                   --------->DEAR3(1)                                  <------NtERF2                                 --------->LBD16                                 <---------ATERF1(1)                                 ------>NtERF2                                --------->RRTF1(2)                                --------->ATERF1(2)                                <---------ATERF1(2)                                --------->RAP2.3(2)                                --------->DEAR3(1)                                --------->RRTF1(3)                                <---------DEAR3(1)                                --------->RAP2.6(2)                               --------->RAP2.6(1)                               --------->RAP2.3(1)                               --------->RRTF1(1)                               --------->DEAR4(2)                               --------->ATERF1(1)                               --------->ERF1                               --------->ORA47(2)                                 ----------->ARR10                              ------>NtERF2                                 --------->ANAC46                              <---------ATERF1(1)                          <---------LBD16                              <------NtERF2                            <---------ARR14(2)                              <---------At4g35610                      --------->ARR14(2)                              --------->At4g35610                      ------->TEIL<---------At4g35610                             --------->ANAC46                          <-----------ARR10 <---------MYB52(1)         --------->SPL7                             <---------ARR11(1) -------->LBD16          <---------ANAC46                             <---------ARR14(1) ---------At4g35610      <---------ANAC58         --------->GLK1(1)   <---------CCA1(2) -----ARR14(2)           <---------ANAC58   <---------TGA1a          --------->LBD16 -->TEIL                 <---------ANAC55(2)--------->TGA1a         <---------ANAC46 <------ZmHOX2a(2) ---->ARR14(2)        <---------MYB52(1)    --------->ANAC46        <---------ANAC55(1)           --- ->ANAC58      ------>ZmHOX2a(1)--------->RAP2.3(3)                 <---------ANAC58--------->ARR11(3) ->ANAC46     --------------------->WRI1    <---------O2            <---------ANAC58<---------ARR11(3) ->ANAC58------>ZmHOX2a(1)<---------SPL7    --------->O2            --------->ANAC55(2)     --------- -------->At4g35610---------->ID1--------->ABI4(1)<---------GLK1(1) <---------ANAC55(2)    --------->LBD16   tccgctaactccttctccttcgtcgttacgtccgccgccgattctcacgtcgaaatccatcccttcgattccgtatctacggctcagatcatccgagaca  19521800                                                                   <<<<<<<<<GATA-3                                                                   <<<<<<<<<GATA-2               <---                                                                   <<<<<<<<<GATA-1               <---                                                                   <<<<<<<<<GATA-4             <-----                                                                 --------->WOX13(1)            ------                                                               <------ZmHOX2a(2)               <-----                                                           --------->ALFIN1                    ------                                                          ------->MYC2                         ======                                                          ------->MYC4                         <-----                                                          <-------MYC4                         ------                    <---------ALFIN1    --------->ANAC58  <-------MYC2                         <-----                    --------->ANAC46    --------->ANAC46  ------->PIF5                         ------                 ------>ZmHOX2a(2)  <<<<<<<ZML2           <-------PIF5               <---------ARR14(2)               <---------ARR14(2)<---------HSFB2a(2)      <-------MYC3               --------->ARR14(2)               --------->ARR14(2)--------->HSFB2a(2)      ------->MYC3        <---------MYB46(3) <---           --------->At4g35610   ------>ZmHOX2a(1)       <---------ANAC55(2)<---------MYB52(1) ======    ====================================HOX2a_HOX2a      ==========================MYC_MYB  ---------    <------ZmHOX2a(2)            =====================================HOX2a_HOX2a<------ZmHOX2a(2)   --------->ARR14(2)       --------->YAB1               --------->O2  <---------ALFIN1    <---------   <---------ARR14(2) --------->ANAC46  --------->ANAC58 <---------O2  --------->ANAC46   --------->ANAC46 ------>DEAR3(1) =======================HOX2a_HOX2a      --------->TGA1a   ========================== -->HVH21  <---------At4g35610<---------YAB1             <---------TGA1a   <-------GAMYB --------->LBD16   gcgacgatccatgcgctgatccacacagaatcatcctagaacacgagatgaacaaaaacacgtggatcaatccacaccgttggatcaaatccgagtcacg  19521900  Previous    Next  AGI:  At3g52605.1    Description:  other RNA Range:  from: 19521322    to: 19522313    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52610.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN71367.1); contains domain CoA-dependent acyltransferases (SSF52777) Range:  from: 19521424    to: 19523636    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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