Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ANAC46   <---------ZAT14   <-------TEIL   --------->ZAT14 ---------ANAC58 ---------ANAC58             ------>ZmHOX2a(1) ---------ANAC46             <---------HSFB2a(2) --------MYB46(3)            --------->HSFB2a(2)             <---------ALFIN1    --------->ANAC58 ------MYB52(1)   ---------->DOF2                          <---------ALFIN1      --------->ANAC58 <--   ttgggtacacacagacaatccaaagggactcctagagattgtgagtcccaacttcttctccccacacgagtagacgatgcgctacgaaaatggcattagt  19513800                                                                                  <-----------GT1                                                                                 <-----------GT1                                                                              --------->ARR14(2)                             ========================================================================                             --------------->AGL15                            <---------ARR14(2)  ---                          --------->GLK1(2)           --------->YAB1      <---------LBD16        <---                          <---------ARR11(3)          --------->ANAC58    --------->LBD16        <---            <-----------GT1  <---------------AGL15    --------->ANAC58   <---------ANAC46        ----  <---------ANAC58   --------->ZAT14           --------->ARR14(2)        <---------ANAC58       <----  <---------ANAC58   <---------ZAT14           <---------ARR14(2)        <---------ANAC58       ----- --------DOF2     ------>ZmHOX2a(1)           --------->GLK1(1)    <---------TOE2(3)   <---------MYB52(1)   ctttgcttacaatttcactcctgttcagtatctatatgcagaaatagcaaatccaatcgcaactattttgacgatgcgcggtttttcccgtttgtgtttc  19513900                                                         --------->TOE2(3)                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                               <---------AGP1                                               --------->ARR11(3)               <---------ARR14(2)              --------->GLK1(2)              --------->GLK1(1)                <---------ARR11(3)              <---------CCA1(2)                --------->ARR14(2) ============MADS_MADS                         <-----------ARR10 --->ZmHOX2a(1)--------->ARR14(2)              <---------ARR14(2)                               ----- ------MYB59  <---------GLK1(1)               <------ZmHOX2a(1)                                ------ ------------AGL15                         <------ZmHOX2a(1)                       <---------DAG2 ----------->AGL15 =====================================HOX2a_HOX2a                <----------DOF2  - -------------AGL1 ====================================HOX2a_HOX2a           --------->YAB1    <----- ------------>AG   ------>ZmHOX2a(1)       =============HOX2a_HOX2a         <-------TEIL --------->ANAC46   ctaattttgcattagcatatcctttcaacaatgtacaaacgtttaggaggatctaataacatcaataaacttatcacattcataactttatacacaagat  19514000                                --------->ANAC58                                --------->ANAC58                                                    <         --------->ATHB12  --------->ANAC46                                                         < ---->CCA1(2)            <---------TOE1(1)                                                      <---- --->ARR14(2)            <---------TOE2(1)                              <---------ARR11(3)    <------ --------->DOF2    <---------MYB52(1)                       --------->AHL20(2)            <----------DOF2 ----ARR11(3)     --------->TOE2(3) ----------->RAV1(1)  ----------->GT1<---------GLK1(2) <---------DAG2   ttgaaagacaatgactgctacgttagtacgaggcacaacaccagtaagaagactagagacgattaaaaatccaagatgctcaaaaactagcacttttgct  19514100                                 <---------AHL20(1)                      <------MYB46(1)                      <---------ANAC58           --------->AHL20(2)                      <---------ANAC46           <---------AHL20(2)                      <---------ANAC58           --------->AHL20(1)                      <------MYB83              --------->AHL20(2)                     --------->MYB59       ------------>CBF                  --------->TOE2(3)           <---------RAP2.6(3)   --------->ARR11(3)                          --------->TOE1(3)          ----------->GT1        --------->AHL20(1)                    --------->TOE2(3)          --------->RAP2.6(2)   <---------AHL20(2)               <-----------GT1 ----------DOF2      <---------MYB46(3)<---------ANAC58          <---------ICU4 ---------DAG2   <-----------RAV1(1)   <---------ANAC58     --------->AHL20(2)   >>>>>>>>>MYB98 -----ZAT18--------->At5g28300<-----------TBP   <---------AHL20(2)     <----------DOF2             -- ---At4g35610   --------->ARR11(3) <------------CBF      --------->TOE2(3)  --------->ZAT6       <---   cacttttatgggccgtaatatgttgggtctgtatatatattgggtctcaattaaattatccataaaatcactactttaaccctaacaaaaattcagacta  19514200                     <----------DOF2                 <---------CCA1(2)         <---------------------WRI1            --------->ARR14(2)             <---------LBD16          <---------YAB1                 --------->DAG2                       ------->TEIL       --------->GLK1(2)               ---------->DOF2             <---------ANAC58      <---------GLK1(2)            ----------->GT1                 <---------ANAC58      <---------ARR14(2)     --------->At4g35610                  --------->ZAT2 *TSS --------->ARR14(2)     <---------STY1(2)<------NtERF2       ----------------------->TaNAC69(2) -------->DOF2------>ZmHOX2a(2) --------->MYB52(1)    ---------->DOF2        <-----------GT1 ------YAB1 <---------ARR14(2)  ---------->DOF2   ----------->RAV1(1)    <----------DOF2      -------   ttaaagcaaattctgatccgtctctttcgctagctaaaggtaaaaggcggaacaacaaaagaaaccctagcttccctttgtacctctctctgttccaaac  19514300                                                                                            <--------                                                                                           <---------AtMYB61                                                                                         <---------ANAC46                                                                                        <---------AtMYB61                                                                                        --------->ALFIN1                                                                                      <-----------RAV1(1)                                                                                      <---------ANAC58                                                                           <---------ARR14(2)                                                                       ----------------->AGL2                          <---------AHL20(2)                           <-----------------AGL2                         --------->AHL20(2)                     ----------->GT1       <---------ANAC46                         <---------AHL20(1)                <---------AHL20(2)         <---------ANAC58                         <---------AHL20(2)            --------->CCA1(2)   --------->ARR14(2)                      --------->YAB1                  --------->ARR11(3)<---------------AGL15  <--------P         <---------YAB1         --------->ATHB12 --------->GLK1(2)--------->HSFB2a(2)  <- -->ANAC46   ---------->DOF2    <---------AtLEC2      <---------ARR11(3)--------------->AGL15    <---   catggtaagtttgtctaaagcttataattaattttcatggatttagtgattaagaagatatataatctgtaaatccatttctggtattgtgtggtggtct  19514400                             <---------YAB1                          ------>ZmHOX2a(1)                          ==========================HOX2a_HOX2a                          ================================HOX2a_HOX2a                       --------->ICU4                                                            <---                  --------->ANAC46                                                               <---         ----------->GT1  <---------YAB1                   ------->TEIL                     <-------- ----------->GT1  --------->ANAC58                 <------ZmHOX2a(2)                  <-----------RAV1(1) -MYB46(3)----------->GT1--------->TOE2(3)        <---------ARR11(3)                  <---------ANAC58 --------TGA1a    --------->ANAC58                --------->ARR11(3)                  <---------ANAC58 ------ZAT14 <---------AHL20(2)              ------>ZmHOX2a(2)                 <---------AHL20(2)<---   gaagtgagaaaatgtttaataagcaatccttattcttcgaatttcgatctgagatcatatgaattttctgagacattggattttttttgtgtggctctag  19514500 ------ANAC46                                  <---------YAB1                              <--------- ------ANAC58                 <---------ARR11(3)                                         ---------->DOF2 --DOF2                       --------->ARR11(3)              <------MYB46(1)          ---------->DOF2 ------ANAC58          <---------YAB1    <-------TEIL         <------MYB83      ---------->DOF2   cgttgagttatcaaattgagaagtttttattagatattgcaaatgcataatgctagtttttgtttggttttgtagtcgaagagaaagaccaaagagccaa  19514600                                                             --------->ANAC55(2)                                                             --------->ANAC46                                                             <---------O2                                    <------ZmHOX2a(1)        --------->TGA1a                         <---------MYB46(3)                  ===========================MYC_MYB                       <---------ZAT2                        --------->O2              <---------YAB1                       <---------At4g35610                   ===============bZIP_DOF <----------DOF2<                       --------->At4g35610             <---------MYB46(3)      --------->ANAC46     <                     <-----------RAV1(2)       <----------DOF2   <----------DOF2------->GAMYB<------- -ID1 --------->GLK1(2)--------->ZAT2          ========================bZIP_DOF--------->MYB46(3)   <   aggttgagaatgtgactcttggaccagctgttcgtgaaggagagcaagtctttggagttgttcacgtctttgcttcattcaacgacactttcattgtgag  19514700  Previous    Next  AGI:  At3g52570.1    Description:  similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT4G10030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15880.1); contains domain PTHR10992:SF17 (PTHR10992:SF17); contains domain PTHR10992 (PTHR10992); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) Range:  from: 19512108    to: 19513977    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g52580.1    Description:  40S ribosomal protein S14 (RPS14C). Identical to 40S ribosomal protein S14-3 (RPS14C) [Arabidopsis Thaliana] (GB:P42036;GB:Q9SVD9); similar to 40S ribosomal protein S14 (RPS14B) [Arabidopsis thaliana] (TAIR:AT3G11510.1); similar to cytoplasmic ribosomal protein S14 [Brassica napus] (GB:AAO41731.1); contains InterPro domain Ribosomal protein S11; (InterPro:IPR001971) Range:  from: 19514201    to: 19515951    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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