Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  --------->ANAC58                                                                                --------->ANAC58                                                                            --------->ARR11(3)                                                                            --------->AGP1                                                                   <---------WOX13(1)                                                                 --------->ATHB12                     <------ZmHOX2a(1)   <---------ICU4     <---------YAB1 --------->At4g35610 --ZmHOX2a(1)     <---------LBD16       <---------ATHB12   --------->AHL20(2)<------ZmHOX2a(2) --LBD16 <-----------GT1        --------->TGA2(2)      ----------->GT1     <---------At4g35610   aatagcattttaaacccatctcaggaattgagacatcagcaaatcattctcagcgatttgttaaaattgattgattcagatcaagctatatgcgaacaat  19506700                                                --------->TOE2(3)                                             <---------GLK1(1)                                             --------->GLK1(1)              --------->AHL20(2)         --------->YAB1              <---------AHL20(2)     --------->TOE2(2)          --------->REM1(1)<---------------------WRI1<---------ALFIN1                          ------   ---------->DOF2  <-----------GT1  --------->TOE1(2)                           ---------->DOF2   ttagacaaagctacaattttttatactagatcgatagaacctatgagaaatctcaacacctattgatcaaaacgaataaaaccaaaagaagaattcacca  19506800                              --------->KAN4(2)                             --------->KAN4(1)                                    ----------->GT1                             <---------KAN4(1)                                  --------->GLK1(2) ---                   --------->MYB52(1)                                      ---------->DOF2       ----                  --------->TOE1(2)                                      --------->ANAC46        ----                 <---------MYB52(2)                                      --------->ANAC58       -----      ----------->GT1 --------->TOE1(2)                                  --------->ANAC58<---------AHL20(2) --->AtMYB61  <----------ID1<---------KAN4(2)   --------->YAB1     --------->MYB46(3)   --------->AHL20(2)   aaaccctagagaaaaaaaaacaaacgagggattattccaaaaccctagaatcaaaatcaaaaaacgagaacaaacccgaaagaatcgaaattttatacca  19506900           ------>ZmHOX2a(1)        <------ZmHOX2a(2)        =============HOX2a_HOX2a                                         ----------->HVH21       <---------GLK1(2)                                                ------>ZmHOX2a(2)       <---------ARR11(3)                                              <---------At4g35610       --------->AGP1                                                  --------->CCA1(2)       --------->ARR11(3)                                             <---------ARR11(3)       <---------ARR14(2)                                             <---------ARR14(2)       --------->ARR14(2)    <---------ICU4                           --------->ARR14(2)     ----------->ARR10       --------->ATHB12                         --------->ARR11(3) --------->ANAC58            --------->ATHB51              <---------WOX13(1)  --------->ZAT2 --------->ANAC58           --------->ICU4           <---------ARR14(2)--------->At4g35610 ------>MYB46(3)            <---------YAB1           --------->ARR14(2)<------ZmHOX2a(2) -->MYB83------>ZmHOX2a(2)--------->YAB1            <---------GLK1(1) <---------AGP1 -->MYB46(1)  ------>ZmHOX2a(1)            <---------AtMYB61          --------->AGP1 ---->ANAC46----------->RAV1(2)<---------WOX13(1)   --------->GLK1(1)<---------GLK1(1)     --------->CCA1(2)   acaacgctagatcctcctgagccaagagtcataattgatgaagttgtggtttcgatatccgattgattttgagatctgacgagcagagaagagagacgag  19507000                                                                                        <---------LBD16                                                                                    <----------DOF2                                                                                <---------MYB52(1)                           --------->ARR14(2)                              --------->GLK1(2)                           --------->GLK1(2)                               <---------ARR14(2)             --------->GLK1(2) ----------->GT1            *TSS         ----------------->AGL1        ----------->GT1    <---------ARR14(2)  ----------->GT1<-----------------AGL1<---------DAG2    ---------->DOF2       <---------GLK1(2) ---------->DOF2 ----------->GT1--------->ARR14(2)   -----   aagaagtaaagggagaatcgaatagagagaatctggtgaatagacagaaagctaaaatgggagggtcaaatttggcaaatcgggtacttttggggagact  19507100                                                                 --------->YAB1                                                              <---------ICU4                                                              --------->YAB1                                                          --------->AHL20(2)                                                        ------>ZmHOX2a(1)                         ------>NtERF2                 --------->TOE1(3)          <---------AHL20(2)                           --------->TOE2(3)   ----------->GT1      --------->DEAR3(1)       <---------AHL20(2)  --------->DAG2      <---------At5g28300        --------->AHL20(2) <---------ICU4          <-------- ---------->DOF2     <-----------GT1             <---------YAB1 <---------YAB1       <----------DOF2 ------>GT1  <-----------GT1                 --------->YAB1  --------->ICU4    <---------ALFIN1   ggaaaaagttatttttttcaaatttaccgcccaaatttgtttttctatcatataattccttaaattatgataactacagaaacaccccttttattttcga  19507200                                                              -------->ATHB1                               --------->ANAC58               --------->ATHB12                         <---------AHL20(2)                   --------->ATHB51                       <---------YAB1                        <---------ATHB51                      <---------AHL20(2)                     --------->ICU4                    <---------YAB1                           --------->AHL20(1)                    --------->ICU4  --------->AtLEC2         <---------AHL20(2)      --------->ATHB12  <-----------GT1<---------YAB1--------->ANAC58              <---------YAB1        <----------DOF2 ---GT1 <---------ARR11(3) <-----------GT1          <-------TEIL          <---------AHL20(2)       <-   gttttgacaacatctatttgttattattttaactagcaatgcaaaatttctatatacatgaaaattattgaaatattaaaactcgcttgatttgcaacta  19507300                                                                                      --------->TOE2(3)                                                                                    ------->TEIL                                                                                    xxxxxxxxxxxxxxxxx                                                                                  <-------MYC3                                                                                  <-------PIF4                                                                                  ------->MYC3                                                                                  ------->PIF4                                                                            <------NtERF2                                                                           <-----------HVH21                                                                          --------->bZIP60(1)                                                                          <---------bZIP60(2)                                                                          <---------ANAC58                                                                          <---------ANAC58  ---------                                                                          <---------bZIP60(1)                                                                        xxxxxxxxxxxxxxxx>smallRNA(s)                                                               ----------->GT1    ------->MYC4                                                               --------->ANAC58   <-------MYC2                                                               --------->ANAC58   ------->PIF5                                                               <---------ANAC46 xxxxxxxxxxxxxxxxxxxxx                                                               <---------ANAC55(2)<-------PIF5          ----------->GT1         <---------YAB1           <-----------HVH21xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ----------->GT1                ----------->GT1         --------->bZIP60(1)   <---------TOE1(2)   --------->YAB1               --------->YAB1     --------->AHL20(2)  <-----------RAV1(1)  <--------  <---------YAB1              --------->ARR11(3)<------ZmHOX2a(1) ------->TEILxxxxxxxxxxxxxxxx>smallRNA(i)  <---------TOE2(3)          --------->YAB1   <---------TOE2(3)--------->ANAC55(2)------->MYC2 --------AHL20(2)   <----------DOF2        <----------DOF2<---------bZIP60(1) xxxxxxxxxxxxxxxxxxx>smallRNA(le3)   aattatcgtaaaatgtaaatttctttttcaaaaatcatgttaaaactttaggataaaatgttgtcacgtatatatgtcgtcgcatgtgccttaatatata  19507400                         <---------GLK1(2)                         <---------ARR11(3)                   --------->ATHB12                   <---------AHL20(2)                  --------->AHL20(2)               --------->AHL20(2)               --------->ATHB51               <---------AHL20(2)               <---------ICU4              --------->ICU4           --------->AHL20(1)           --------->AHL20(2)                       ----------->GT1 xxxxxx>smallRNA(i2)     --------->ARR11(3)    --------->AHL20(2)          --------->AHL20(2) >AHL20(1) <---------AHL20(2)                  <---------YAB1           --------->TOE2(3)       <---- x>smallRNA(se3)  <---------AHL20(2)  <---------------AtSPL8          <-------TEIL              <---- -AHL20(1)--------->AHL20(2)          --------------->AtSPL8     --------->AHL20(2)    --------->MYB52(2)   tgaaaaacagaaattaattatttattagatttttgaaaatttagtacttataaatagaaaaatgtcataaaatacattaaaacaaattttagttgctact  19507500                                      <---------AHL20(2)                                      --------->AHL20(1)                                      --------->AHL20(2)                                      <---------AHL20(1)                                   <---------AHL20(2)                                   --------->AHL20(2)                                   --------->AHL20(1)                       <---------ARR11(3)                       <---------AHL20(1)                       --------->AHL20(1)                       --------->ARR11(3)                     <---------AHL20(1)                                --------->AHL20(2)                     --------->AHL20(1)                                --------->AHL20(1)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                      <---------AHL20(2)           <---------TOE1(3)      <---------AHL20(2)                   <---------YAB1    --------------->AGL15         --------->AHL20(2)                  --------->AHL20(2) --------->ZAT6      <---------ARR11(3)                           <---------AHL20(2) <-----------GT1     --------->ARR11(3)<---------AHL20(2)    --------->ARR11(3) -----DAG2 --------->MYB59<---------AHL20(2)                 <---------ARR11(3)      ----------->GT1 ------DOF2<---------TOE2(3)--------->TOE2(3)            ---------->DOF2    <---------AHL20(2)   ttttcactaaatttaggtttaaaaatattttcttaaataatttaatatttgaagtttgtaaaagttcttaaattttattgaatttgatggtgaattgttt  19507600  Previous    Next  AGI:  At3g52560.1    Description:  MMZ4/UEV1D/UEV1D-4 (MMS ZWEI HOMOLOGE 4, UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase. similar to MMZ3/UEV1C (MMS ZWEI HOMOLOGE 3), protein binding / ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G36060.1); similar to unknown [Populus trichocarpa] (GB:ABK93802.1); contains InterPro domain Ubiquitin-conjugating enzyme, E2; (InterPro:IPR000608); contains InterPro domain Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135) Range:  from: 19505359    to: 19507058    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version