Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <------ZmHOX2a(1)       --------->LBD16     <---------LBD16 ---------------AGL15 -------------->AGL15 ------->ANAC55(2) --------ANAC55(2) ----------------AG                                --------->WOX13(1) --------------->AGL1                             <---------ICU4 --------------->AG--------->At4g35610           <---------YAB1            <------ZmHOX2a(1) ----------------AGL1          ---------->DOF2   --------->ICU4         --------->YAB1 -----MYB52(1)    --------->GLK1(2)              <---------ATHB12 --------->GLK1(2)      <---------YAB1 ->RAV1(1)       <---------GLK1(2)   --------->WOX13(1)      ---------->DOF2           --------->YAB1   tacctattcaggaaaattggaatctgaattactcaaagtctatcacttgtaatcattcaaacaaaaagaatcaataaggagtgactcaactatgattcta  19435800                 <---------LBD16              ------>MYB46(1)             --------->LBD16              ------>MYB83               --------->HSFB2a(2)              --------->ANAC58           <---------HSFB2a(2)              --------->ANAC58          <---------LBD16      <---------ZAT2                  <---------ARR14(2)<---------ANAC58      --------->ZAT2                  --------->ARR14(2)<---------ANAC58  <----------DOF2      <---------At4g35610           ---------->TaMYB80--------->ARR11(3)  ------>ZmHOX2a(1)      --------->At4g35610 <<<<<<<<<<<<<<<<<LFY  ----------->HVH21   --------->DAG2                ---     ----------->RAV1(1) --------->ANAC46--------->ANAC46          ---------->DOF2             ------   tcgactccagcagaccaagcccggttcaagacagtggcaatatccggaacatgacagttcttgccatggtaaagtcctttgaacatcccatctgtttcaa  19435900                                                                                     --------->TOE1(2)                                                                                     --------->TOE2(2)                             <---------AHL20(1)                                    -------->P                             --------->AHL20(1)                                  ------->GAMYB                             <---------AHL20(2)                                 --------->MYB46(3)                            <---------ATHB12                                    <---------MYB46(2)           <---------AHL20(2)--------->AHL20(2)                       <---------GLK1(1)        ------    ---------->DOF2     --------->ZAT14                              --------->ARR14(2)        <----- ------>YAB1            <---------ZAT18                 ---------->DOF2         <---------MYB52(2) --->WOX13(1)       <---------DEAR3(1)       <------ZmHOX2a(1)       <---------ARR14(2)      --------   ttagactaaagaattaatatggtctgtgcaataaattgatcagagaaggacatgttcacaaagtgtttgtggaaatgcctcaactaacctgtgaagttaa  19436000                                               --------->MYB52(1)                                       ---------->DOF2            --------->GLK1(2)           ------>ZmHOX2a(2)       --------->ANAC58               <---------ARR14(2)         <---------ARR11(3)        --------->ANAC58               --------->ARR11(3)         --------->ARR11(3)       --------->DAG2                  --------->ARR14(2) --->MYB52(1)                    ---------->DOF2                 <---------GLK1(2)           -------- ----DOF5.7(2)              ---------->DOF2    ----------->RAV1(1)<---------ARR11(3)      --------->GLK1(2) ->DOF5.7(2)         ------------------------>ANAC81          --------->ANAC46     ---------->DOF2   cggctatgtctgatcttacacaaacacatcaaaagaaaagcaaaagaaacaacagttgagttacacagaatcttgtacattagaaaaaagagaatcaatc  19436100                                                            <---------ANAC58                                                     ------>NtERF2                                                    <---------TGA2(1)                                                    <---------bZIP60(1)                      ------>ZmHOX2a(1)             --------->TGA2(1)                     <---------MYB59                --------->bZIP60(1)              <---------WOX13(1)                    --------->ANAC58      <---------AHL20(2)               <---------ATHB12     <---------ANAC58                     <---      --------->AHL20(2)           <---------ANAC58 --------->ANAC46                          -------     --------->AHL20(2)            <---------ANAC58 --------->ANAC58                        *TSS <---     --------->AHL20(1)        <---------ANAC58  ----------->TGA1   ----------->GT1         ---------     <---------AHL20(2)        <---------ANAC58  <---------ATHB12  --------->DAG2   ----------->RAV1(1)     <---------AHL20(1)      <-----------GT1     ----------->HVH21---------->DOF2  --------->ANAC58 ->WOX13(1)<---------YAB1 <---------ICU4--------->YAB1      <---------ANAC46       --------->ANAC58   gaagaaatttattttgagtgattcctaattttgacttgcctatcatcttcaatgacgccattgcgagagaaagtgaaacaatggcacaacacaatgaaac  19436200                                            ------------>CBF                                           <-----------------AGL1                                           <-----------------AGL2                                   <                                           ----------------->AGL2                                  <-                                           <-----------------AG                                   <--                                         --------->DEAR3(1)                                     <----                                        --------->MYB46(3)                                      -----                                        --------->ANAC58              <---------SPL7           ------                                        --------->ANAC58            <---------------AtSPL8     ------ -------DOF2                            --------->ANAC46      <---------AHL20(2)           <---------YAB1 >TEIL            <---------AtLEC2    <---------ALFIN1        <---------ATHB51          --------->ICU4 ------DAG2   <----------DOF2   <---------DAG2             --------->AHL20(2)    ---------->DOF2----- >YAB1   <-----------GT1        <----------DOF2   <---------------AtSPL8       --------->CCA1(2)<----   ttttttttttcttacgctttgtatgactaatcggcttttcccacggcccaatatggttcgataaattatgggagtacgaagataaaagtatttatgaata  19436300    <---------MYB52(1)                                                                      <--------  <---------ZAT6                                                                            --------- ---------At5g28300                                                                        <---------AHL20(1) ----------GT1                    ---------->DOF2                               <---------ICU4 -------YAB1                    <---------ATHB12                                --------->ATHB51 ----HAHB4                  <---------YAB1                                      <--------ATHB1 ---->ATHB51            <------MYB83 --------->ANAC58                           --------->YAB1 --->ICU4               <------MYB46(1)                                        <---------YAB1   <---- --->AHL20(2)          --------->MYB59  ----------->RAV1(1)                    --------->ICU4   ----- ---->YAB1          --------->GLK1(2)--------->ANAC58                     --------->YAB1   <---------AHL20(2) -----ICU4      --------->YAB1--------->WOX13(1)              ---------->DOF2--------->YAB1--------->AHL20(2)   attactgttagactcccataagaatttggtatcaatgaaaggcaacatttcagtgaaaaaaaaaaaaagactcccataagaataattgtctaaattattt  19436400                                              ----------->GT1                                          <---------YAB1                                    --------->AHL20(2)                                --------->AHL20(2)                           <---------ICU4 <---------AHL20(2)            --------->AHL20(2) <---------AHL20(2)        <---------YAB1     <---------AHL20(2) -AHL20(2)  <---------AHL20(2)--------->AHL20(2)     --------->YAB1    --------->At5g28300       ---- >AHL20(2) --------->AHL20(2) <---------AHL20(2)--------->AHL20(2) --------->MYB52(1)         ------- -----AHL20(2)          --------->YAB1    --------->AHL20(2)   <---------ZAT6 --------->GLK1(2) <---- ---->AHL20(2)         <-------TEIL <---------AHL20(2) --------->ZAT6 ----------->GT1        <-------   atatagagaacaaattaatctaagtttcataatttaaaataaatataaatgtaaataatactatagagataactgtaaataatctatacttaagtatgat  19436500                                                                                       <---------ICU4                                                                                    --------->YAB1                                                                          ------>ZmHOX2a(2)                        <---------AHL20(2)                               <<<<<<<<<GATA-2                        --------->AHL20(2)                               <<<<<<<<<GATA-1                    <---------AHL20(2)                                   <<<<<<<<<GATA-3                    --------->AHL20(2)                                   <<<<<<<<<GATA-4            -                   --------->AHL20(2)   --------->HSFB2a(2)              <------ZmHOX2a(2)  ---------                   <---------AHL20(1)   <---------HSFB2a(2)              <---------GLK1(1) <---------YAB1                   <---------AHL20(2)  <---------LBD16                  <---------ARR11(3)--------->ARR11(3) ----->YAB1  <-----------GT1      <---------ARR14(2)                    <---------AGP1 --------->YAB1 -->YAB1 <---------AHL20(1)       --------->ARR14(2)  <-----------GT1   --------->ARR11(3)<---------ARR11(3) -----YAB1<---------AHL20(2)      <---------GLK1(2)<---------ICU4    <---------WOX13(1)--------->AHL20(2) --YAB1  --------->AHL20(1) <-----------GT1    <-------TEIL       <---------YAB1--------->LBD16    --   aatatttgatatatatttcaatttttttaatttccatattctctggaaattcattttgaccatcgattttgatagatctctccgaataataatatcatag  19436600                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   --  <---------WRKY12                             --------->YAB1   --------->ALFIN1                 ---- -------->At5g28300             --------->ANAC58  --------->AHL20(2)                  --------->ANAC46 >YAB1 --------->AHL20(2)       --------->ANAC58  <---------AHL20(2)        --------->AHL20(2)  ----- --------->GT1       ----------->GT1  <---------ATHB12 ---------->DOF2 ------>ZmHOX2a(2)      <------   acggtcaaattaacttaagtcgattgtaaaaaataagcaaatcgttccataataaaacaaagaaatgtggtgatcgcattatatatacacagagtttaac  19436700  Previous    Next  AGI:  At3g52390.1    Description:  tatD-related deoxyribonuclease family protein. similar to tatD-related deoxyribonuclease family protein [Arabidopsis thaliana] (TAIR:AT3G03500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67025.1); similar to Os07g0158200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001058926.1); contains InterPro domain Deoxyribonuclease, TatD-related; (InterPro:IPR001130); contains InterPro domain Deoxyribonuclease, TatD Mg-dependent (InterPro:IPR012278); contains InterPro domain Deoxyribonuclease, TatD; (InterPro:IPR015992) Range:  from: 19433966    to: 19436192    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52400.1    Description:  SYP122 (syntaxin 122); SNAP receptor. Identical to Syntaxin-122 (SYP122) [Arabidopsis Thaliana] (GB:Q9SVC2;GB:Q9SUJ2); similar to SYP121 (syntaxin 121), SNAP receptor [Arabidopsis thaliana] (TAIR:AT3G11820.1); similar to syntaxin-related protein Nt-syr1 [Nicotiana tabacum] (GB:AAD11808.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 19436612    to: 19438119    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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