Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->TOE2(3)                                     <-----------GT1                                   --------->ICU4                                               -----                              --------->LBD16                                                   <----                             <---------ANAC55(2)                         ------------------------>ANAC81                             --------->ANAC55(2)                  <---------YAB1<----------ID1  <----                     <---------TOE2(3) <---------ICU4          <---------AHL20(1)           ---------                     <---------TOE1(3)<---------YAB1           --------->AHL20(1)        --------->ANAC58                     --------->MYB59--------->YAB1         <---------AHL20(2) ---------->DOF2 -------           <---------ANAC58  --------->ANAC46------>ZmHOX2a(1) --------->AHL20(2)        --------->ANAC58           <---------ANAC58 <---------LBD16 --------->TOE1(3)  <---------AHL20(2)      --------->MYB52(1)   gacaaaaacaattgcttaacatttaggttttacggaaattatcattccttaagaattttgtttattttattacagatagaaaaagacgaaaacggaaaga  19428100                                                    --------->At4g35610                                                   ------->TEIL                                                 ---------->DOF2                                            <---------ALFIN1                                       --------->At1g77200                       ----------->GT1                                       ------->GAMYB<---------At4g35610          <---------MYB46(3)                                       --------->ANAC46                     <---------At4g35610                                      --------->MYB46(3)                    --------->At4g35610         --------->ANAC58             <------------AtMYB77                  <---------ZAT2     ====== ---->ARR11(3)----------->GT1         --------->DEAR3(2)               --------->ZAT2          ------ -----GLK1(2) <---------O2          --------->ARR14(2)                 --------->At4g35610  --------- -----ARR11(3)--------->O2          <---------ARR14(2)                 <---------ZAT2      --------->LBD16 ->DOF2  --------->ANAC58 <---------ZAT18 <---------ALFIN1             <---------At4g35610<---------LBD16 ---->ARR10   <---------ANAC46      --------->MYB52(1)        ---------->DOF2 <---------MYB46(3)   ttttgacttgaaggcaacgtgaaatttgtgcatttgagtaaccgacacacatgaagctcaaacacaaagacagagctgagctgttgttaattccctgaaa  19428200                             --------->TGA2(2)                            <-----------HVH21                            <-----------TGA1                           --------->O2  <---------AHL20(2)                           --------->TGA1a                           --------->bZIP60(1)                           <---------TGA1a                           --------->bZIP60(2)                        --------->LBD16 <--------HAHB4                           <---------bZIP60(1)                     ------>ZmHOX2a(1)  --------->YAB1                           --------->ANAC46                       <---------ALFIN1   <---------YAB1                          <-----------STF1                 ------>MYB46(1)         <---------------AGL15 ====================================bZIP_DOF             <---------ALFIN1         --------------->AGL15 ---->DOF2  =========================bZIP_DOF<-----------GT1--------->O2    --------->AHL20(2) >LBD16     <----------DOF2<---------O2  --------->AHL20(2)------>MYB83     <---------AHL20(2)-------   agctcaactcttggcttcatgttttatcgacgtcaccatacatttatttcccttatagacccacttctcctccccaaaataaatactataattagagaaa  19428300               --------->ANAC46              --------->MYB46(3)             --------->ANAC58             --------->ANAC58             --------->ANAC46            ------>MYB46(1)            ------>MYB83           <---------ALFIN1          <---------MYB111(1)          --------->AtMYB61          <---------MYB46(2)          --------->MYB46(3)          <---------MYB55(2)          --------->DEAR3(1)          <---------MYB111(2)         --------->ANAC58         --------->ANAC58         --------->ANAC46        ------>MYB46(1)      --------->ATHB12            --------->YAB1        ------>MYB83         --------->YAB1           <---------ICU4       <---------ALFIN1      <---------ICU4           --------->YAB1      --------->MYB46(3)    <---------ATHB12       --------->YAB1                       <----------ID1   <-----------GT1      --------->AHL20(2)       <---------YAB1            --------->ANAC46 --->DOF2<---------ALFIN1<---------AHL20(2)----------->GT1             --------->AHL20(2)    --------   gcattaaacccacccacccaaaaccattaaatcattaagaagaaaatgtttattaataataagaaaaatgaaattatacacaactaaaaaaaaacaaaag  19428400                                                                                                   --                         --------->At4g35610                                                       --                         --------->ANAC46                                                         ---                      <---------ATHB12                                                            <--                      --------->MYB46(3)                                                          ---                     ------>MYB83                              --------->AHL20(2)                 ---                     ------>MYB46(1)                   <---------MYB52(2)                         ---                    --------->WOX13(1)               <-----------GT1--------->AHL20(2)            ---                  ------------>CBF              ------>ZmHOX2a(1)  --------->AHL20(2)             ---                --------->YAB1                 --------->TOE2(3)   <---------AHL20(2)             --- >>>>>>>>>TBF1 --------->MYB46(3)          <----------DOF2 --------->MYB46(3)                    ---- -->DOF2   ------------>CBF            <---------GLK1(2)  -------->P*TSS            -----------------   gaagaagaaacatcacaatcaccaatcacctcactatatcaaattctttccttattcactaaccaaaaaataaataaactcaaaaccattcttcatttcg  19428500    <----------DOF2 <---------ALFIN1 --------->RAV1(1)              ------>ZmHOX2a(2) ---->NtERF2 <---------ALFIN1   ===================================HOX2a_HOX2a ------>DREB2C(2)               =============================HOX2a_HOX2a -------ETT(1)                --------->ARR11(3) ------>RAP2.3(3)  <---------ALFIN1 ------>DEAR4(1)   --------->AtMYB61                     ------>ZmHOX2a(1)                          - ------>At1g77200 --------->MYB46(3)                    <---------ALFIN1                --------->ANAC46 -------->HVH21 --------->AtMYB61        <---------GLK1(2)                     --------->DEAR3(1)   < ------>DEAR3(1)--------->DEAR3(1)      <---------HSFC1(2)                  --------->AtMYB61       < ------>ANAC46 --------->MYB46(3)       --------->HSFC1(2)  ------>ZmHOX2a(1) --------->ANAC46    --- ----->RAP2.3(1)<---------ALFIN1================================HOX2a_HOX2a <---------ALFIN1--------- ---->WRI1   --------->ANAC46 <---------ARR11(3)      ------>ZmHOX2a(1)    --------->MYB46(3)   <----   ccgacactttcttctccaccaccaccatggatgatctctccaagcttctcttcttcctcctcctcactatctccattaccaccgcattacccgataaacc  19428600     <-----------HVH21    ----------->GT1   <---------MYB46(3)   <---------DEAR3(2)                                      --------->AGP1  --------->ETT(1)                                      --------->ANAC46 -------->ARR14(2)                                   <---------ZAT14 ---------ARR14(2)                                   <---------REM1(2)                             -- -----------HVH21                                    --------->ZAT14            --------->DAG2     -- ------>LBD16                                      --------->ANAC46            ---------->DOF2     -- ->DOF2                                          --------->ANAC46    <---------ZAT2--------->ARR11(3) -----LBD16                  ------>ZmHOX2a(1)   --------->ZAT6--------->MYB52(1)  <---------ARR11(3)   cgggtcgggtcaaataaactcaaactccgtcctcgttgctcttcttgactcacactacacagaactagcagagctcgtcgaaaaagctcttcttctccaa  19428700                       --------->ANAC46                     --------->ANAC46                  <---------WRKY12               <------MYB83               <------MYB46(1)                          <---------ANAC46     ------>ZmHOX2a(1)             <---------MYB52(1)                 --------->MYB52(1)           --------->LBD16           <---------MYB46(3)                --------->ANAC46      --------->GLK1(2)           <-----------RAV1(1)               --------->TOE1(1)     --------->ARR11(3)        --------->GLK1(2)        --------->GLK1(2)      --------->TOE2(3)  ------>ZmHOX2a(2) ------->TOE1(3)  <---------WRKY38(1)        --------->TOE2(1)    --------->RVE1(1)   --------->ARR11(3) ------->TOE2(3)  <---------WRKY45 <---------ICU4     ------>NtERF2<---------ARR11(3) <---------ARR11(1) ------->TOE1(2) --------->WRKY18(1)        ------>ZmHOX2a(1)     --------->CCA1(1)  <---------CCA1(2)   accttagaagaagctgttggtcaacacaacatcacaatctttgctcctcgtaacgatgccttagaaaaaaatcttgatcctgaattcaaatctttcttac  19428800                                                                                               ------                                                                                              -------                                                                                          <---------MYB52(1)                                                                                          --------->DOF5.7(2)                                                                                        <---------MYB46(3)                                                                                       <------NtERF2                                                                                      ------>NtERF2--                                                                                     --------->RAP2.3(2)                                                                                     --------->DEAR3(1)                                                                                     --------->RAP2.3(3)                                                                                    --------->RAP2.3(1)                           --------->YAB1                                           --------->ATERF1(1)                  --------->ATHB12                                                 <---------ATERF1(1)                  <---------ICU4                                                   --------->LBD16 <-           --------->TOE1(3) <---------YAB1                                        ------>NtERF2-----   ------->GAMYB  --------->YAB1                                                  --------->ANAC46 <-  --------->MYB46(3)       <---------ICU4<-----------GT1                          --------->DEAR3(1) ------>MYB83    --------->ICU4 <---------YAB1                                  ------>ZmHOX2a(1)<--- -------->P--------->TOE2(3)<----------DOF2                                     <---------ATERF1(1)<- ------>MYB46(1) <---------ATHB12  <---------TOE2(3)  ---------->DOF2--------->ANAC46--------->RRTF1(3)   tccaaccgaaaaacctcaaatcattacaatctttattaatgtttcacattcttcccaaaagaatcacttctccacaattctcctccgccgtcgttagcca  19428900                                            <---------At4g35610                                          <---------WRKY38(1)                                      --------->DAG2                                  ------->GAMYB --------->SPL7                 ------>MYB46(1)                                                    -- --------->ZAT14             --------->MYB46(3)               ------>MYB83                         -- --->DEAR3(1)      --------->AtMYB61 ---------->DOF2          ------>MYB46(1)                      -- -->MYB46(3)--------->MYB46(3) --------->MYB52(1)           --------->AtMYB61                      -- ------->ZAT14  <---------ALFIN1------>MYB83--------->At4g35610                                   --- --------ZAT14  --------->AtMYB61--------->ANAC58        <-----------GT1                          <-- ->NtERF2   <---------MYB52(2)--------->AtMYB61  --------->LBD16                            <-------- --------SPL7------->GAMYB <-----------GT1<---------WRKY12  <---------MYB59<-----------GT1  <-------- ---NtERF2  <---------MYB55(2)--------->MYB46(3) --------->At4g35610  --------->ATHB12      --------- --------ZAT18 --------->MYB46(3)--------->ANAC58<---------At4g35610 <---------ATHB12       ---------   ccgtactctctccaacgaccacctccatttcaccaacggaaaagtcaactccgctgaaataaccaaacccgatgatttaactcgtcccgatggaatcatc  19429000  Previous    Next  AGI:  At3g52370.1    Description:  FLA15 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 15 PRECURSOR). Identical to Fasciclin-like arabinogalactan protein 15 precursor (FLA15) [Arabidopsis Thaliana] (GB:Q9FT45); similar to FLA16 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR) [Arabidopsis thaliana] (TAIR:AT2G35860.1); similar to fasciclin-like arabinogalactan protein 14 [Gossypium hirsutum] (GB:ABV27485.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 19428468    to: 19430760    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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