Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->ARR14(2)                                                                                    <---------AGP1                                                                                    <---------ARR14(2)                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                                                    --------->AGP1                                        --------->ANAC46                           <---------CCA1(2)                                        --------->O2                          ----------->GT1                                   --------->ANAC58                  --------->ATHB51 ------>ZmHOX2a(2)                                   --------->ANAC58               <---------------AGL15                                   --------->ANAC46               --------------->AGL15                              --------->ANAC46                   <-----------------AGL1                              --------->ANAC58                   ----------------->AGL1                              --------->ANAC58                   <-----------------AGL2                            <---------ALFIN1                     ----------------->AGL2                <---------MYB59    ------>MYB46(1)               <-----------------AGL3 --------->ARR14(2)  ----------->GT1    --------->ANAC58         ----------------->AGL3 --->GT1       <-----------------AGL1   --------->ANAC58         ----------------->AG<------ZmHOX2a(2) -TOE1(3)      ----------------->AGL1   --------->bZIP60(2)  --------->ATERF1(1)  ----------->ARR10 -TOE2(3)    <---------WRKY18(1)   ------>MYB83     <---------HSFB2a(2)    <---------AtLEC2   acaaatttgcactcttgacccaattgtgaaacacaccaagccacgacaagcgttcaagaagtagcctcccattatcggcatggttagatcttggtcgatt  19416800                  <---------YAB1              --------->ATHB51                --------->YAB1                --------->ATHB12                <---------ICU4           --------->ANAC58               <---------YAB1       --------->ANAC46                                         --------               --------->ICU4       --------->ANAC58                                         <-------             --------->YAB1         --------->ANAC58                                         <-------             <---------ICU4  <---------REM1(1)<---------ICU4                 --------->ANAC58--------            --------->ICU4 --------->YAB1--------->ANAC58                    --------->ANAC58========            <---------YAB1<---------ATHB12   <---------YAB1        --------->MYB46(3)        ========   acagagacagagtgatcatcatgactcaatgatgtagtaagcaacgcataattgctctgttttgccctaaccactaaataagcaaacaaacttcgacgtg  19416900                        <<<<<<<<<<WRKY43                        <<<<<<<<<<WRKY26                             ------->TEIL                      <------MYB83                                --------->ANAC58                      <------MYB46(1)                      <----------DOF2                     <---------MYB46(3)                   ------>ZmHOX2a(2)                     <---------AtMYB61                   <------ZmHOX2a(2)                    <---------MYB55(1)                  <---------AGP1                    <--------P                          <---------ARR14(2)                    <---------MYB52(1)                  --------->ARR14(2)               --------->MYB52(1)                       <---------ARR11(3)              --------->ARR11(1)                        --------->AGP1                             <- ->TGA1a  ---------->DOF2  --------->ANAC55(2)          --------->ARR14(3)                     <----- --TGA1a <---------AHL20(2)<---------ANAC55(2)          --------->ARR11(3)                    ------- --O2  --------->CCA1(2)<<<<<<<<<<WRKY38                <---------ARR14(3)       <---------At4g35610 ->O2 <---------ARR11(3)--------->WRKY18(1)            <---------CCA1(2)         --------->At4g35610 ============================MYC_MYB       ------>ZmHOX2a(2)      --------->ANAC58       <-------TEIL ====================bZIP_DOF        --------->CCA1(2) <---------ARR14(1) <---------CCA1(2) <--------   atgagcaagatttaaagaaacggttggtcaagtatcgagatttgatcgtggaaaaccagatctttgagacgcacttaaatctcatcagaggttcaccggt  19417000                 <---------WRKY12                 <---------ETT(2)                 <---------WRKY38(1)                --------->WRKY18(1)               <--------ZAP1                                                   --------->ANAC46         <-----------ARR10                                                     --------->ANAC58         --------->GLK1(2)                --------->SPL7                    ------>ZmHOX2a(1)         <---------ARR14(2)             <---------SPL7               <---------DAG2       ---------->DOF2  --------->At4g35610                 <---------------AtSPL8         <----------DOF2    <---------MYB59  <---------At4g35610                 --------->HSFB2a(2)           <---------ANAC58  <---------ARR11(3) --------At4g35610                    <---------HSFB2a(2)      <----------DOF2 --------->ANAC58     < ----MYB52(1)  <-----------HVH21      <---------------AtSPL3------>ZmHOX2a(1)--------->MYB52(1)     - -->LBD16--------->ARR14(2)          <---------ANAC46<------------------------ANAC81--------->ANAC58< -LBD16 <---------GLK1(2)  ------>ZmHOX2a(1)       --------->ZAT14  <---------ANAC58--------->ANAC58<   aatctgctcagaatctcggtcaacaattcctcacagagttcgggtacgaccactattctctccttcttttgctttttcctcacggcaagacctaaagacg  19417100                                                              <---------ZAT18                                                              <------NtERF2                                                              --------->ZAT18        <---------TOE1(2)                                    ------>NtERF2        <---------TOE2(2)                                <---------ANAC46    ------>NtERF2      --------->TOE1(2)                               ----------->HVH21  --------->ANAC58      --------->TOE2(2)                             <-----------GT1      --------->ANAC58 ---------ANAC55(2)                             --------->AHL20(2)       --------->ANAC46           < -------->ANAC55(2)                             <---------AHL20(2)------->MYC3                 <----- ------MYB83                             --------->TOE2(3)   ----------------->PIF3(1)         <----- ------MYB46(1)   ------->TEIL   <-----------GT1--------->AHL20(1)<-------MYC3                 ------   ataggtaacctaggttaatgcatcttgttttcattttcccttgcctcaaattttttacgacgggggcacatgaagacgacaccatagttgtttcacagat  19417200                                                             ---------->DOF2                                                          <-----------HVH21                                                       <---------ANAC58                               <---------YAB1          --------->ANAC55(2)                              ------>ZmHOX2a(2)        <---------ANAC55(2)            --------->ZAT6       ---------->DOF2      --------->ARR11(3)         <---------ANAC58              <---------TOE2(3) ------->TEIL               <---------ARR11(3) <---------ANAC58                     <-----------GT1 ---------CCA1(2)    <---------ATHB12          <---------ANAC58                   --------->AHL20(2) ----GLK1(2)       --------->WOX13(1)          <---------ANAC46             --------->ANAC58 ----ARR14(2)    ------------>CBF              <---------AtLEC2             --------->ANAC58 --->ARR14(2)   <-----------HVH21<------------CBF      <---------ANAC55(1)--------->MYB52(1) --------   ttgtatctccaaagcctatgtcaatcgatcgatcttattgtatacagttgcatggttacctgtcaaagacaaaaaaaaacgaaatttaacattactaaag  19417300                                                                     ----------->GT1                                      <---------AHL20(2)             <----------ID1                  ---------->DOF2   <---------YAB1                 --------->DAG2       <---------ANAC58            --------->AHL20(2)             ---------->DOF2       <---------ANAC55(2)   <------ZmHOX2a(1)                --------->ANAC58                    <--       <---------ANAC58      --------->YAB1                   --------->ANAC58                 ------       --------->ANAC55(2) <---------TOE1(3)              <-----------GT1                     ------- -->DOF2    <---------YAB1 <---------TOE2(3)          ------>ZmHOX2a(1)    ------------>CBF--------->GLK1(2)   aatgagattacttgatgattcaaagtgtttaggataatattatatgccctagtttcctattaacaagaaaaaggagaaacaattcaagaatagaatccta  19417400     <---------TOE1(2)     <---------TOE2(3)                     <------------CBF     <---------TOE2(2)                 --------->YAB1     <---------TOE1(3)               --------->GLK1(2)        ---------->DOF2  <---------ANAC58                ------------>CBF      --------->DEAR3(1)  <---------ANAC46               --------->ANAC58      --------->ANAC58  <---------ANAC58               --------->ANAC58      --------->ANAC58 ----------CBF               --------->ANAC58          --------->ANAC46                      <------- >ZmHOX2a(1)                 --------->AtLEC2        <---------ALFIN1              --------->ZAT14<-- -->TOE2(3)                  --------->ANAC58       <---------REM1(2)           <------------CBF  ---   aattgcttaggtttggctctgtttaaaaaacatgcaaacaatctgaattgatgctacacggcccaaaagaactgtaatgggccattgtactacttgtgtt  19417500                                                                     --------->YAB1                                                                 <---------YAB1                                                               ----------->GT1                                                           <---------TOE2(3) --ZAT6 ------->TEIL   <----------DOF2                     <---------TOE1(3) ----------->GT1 -------YAB1       <----------DOF2                     <----------DOF2 <---------YAB1           <---- ------>ICU4<-----------GT1  <----------DOF2      <---------AHL20(2)<---------YAB1 <-----------GT1   ataattcatgaatttcacattctttctttttcttttctatttagaaatctatttattctttaagcttgttattatagttctgttaatacagttcaaatta  19417600                                            ----------->GT1                                          --------->ICU4                                       <---------AHL20(1)                                       --------->AHL20(1)             ---------->DOF2                                       <---------AHL20(2)        --------->ZAT18                 <---                                    --------->WOX13(1)        --------->HSFB2a(1)      <---------MYB52(1)  <----------DOF2  <----------TaMYB80  --------->AHL20(2)     <---------HSFB2a(1)     <-------GAMYB -------GT1 <---------ZAT18        <---------AHL20(2)       ---------->DOF2     --------->ZAT6 <-----   tcaactttcaatagtgtccacatattcccaagggtattcaattaattagtaatatgttcaaagaaagtccccaaaagttttaagactccgttatcaagac  19417700  Previous    Next  AGI:  At3g52330.1    Description:  F-box family protein-related. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G52320.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 19415933    to: 19417185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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