Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------->PIF5              ------->MYC2              <-------PIF5              <-------MYC4              <-------PIF4              ------->PIF4              <-------MYC3              ------->MYC3              ------->MYC4              <-------MYC2             =======================MYC_MYB             <---------TGA1a             <---------O2             --------->O2             --------->TGA1a             ==================================bZIP_DOF                 -------->ATHB1           <------------OsbHLH66                                        --------->ATHB51           <---------ALFIN1                                             --------->ATHB12         =====================HOX2a_HOX2a                               <---------ICU4         <------ZmHOX2a(2)                                              -------->HAHB4         ========================HOX2a_HOX2a                            <---------AHL20(2)         --------->CCA1(2)          <----------DOF2                    --------->ICU4        <---------ARR14(2) ------>MYB46(1)                             <---------ATHB51        --------->AGP1   <---------MYB111(2)                           <---------ATHB12        --------->ARR11(3) -------->P                               --------------->AGL15        <---------ARR11(3) ------>MYB83                             <---------------AGL15        --------->ARR14(2)------>ZmHOX2a(1)                   <----------DOF2                    ----    --------->YAB1       <---------MYB111(1)      <-----------RAV1(2)  <---------YAB1 <---------YAB1  --------->GLK1(2)    ------>ZmHOX2a(1)     ---------->DOF2 <---------DAG2           <---------TOE2(3) ------>DOF2 ==================================bZIP_DOF    ---------->ID1<------------CBF--------->CCA1(2)   aaagaatcaagatccacgtgctctcctcctaccctcttctttgtaccgaaagtcaggttttggccttttgctaattattgtatcaaataagatagggaga  19410000                                                                                           ------->MYC2                                                                                           <-------MYC3                                                                                           <-------MYC2                                                                                           ------->MYC3                                                                                          --------->O2                                                                                          <---------ANAC55(2)                                                                                          <---------ANAC58                                                                                          <---------O2                                                                                          --------->TGA1a                                                                                          <---------ANAC46                                                                      <------ZmHOX2a(2)   ===========                                <---------ARR14(2)                   --------->ARR11(3)   <---------bZIP60(2)                   ----------->GT1                    --------->ARR11(3)                  --------->ANAC55(2)                  <---------TOE1(3)        <-------TEIL              <---------ARR11(3)   <---------ANAC58             <----------DOF2    --------->ARR14(2)    --------->ARR14(2)                  <---------TGA1a           ------>ZmHOX2a(1)   <---------CCA1(2)      <-----------ARR10               <-----------HVH21  ------------>CBF<---------TOE2(3)----------->GT1    <---------ARR11(3)             --------->WOX13(1) ----->CCA1(2)   ---------->DOF2------->TEIL          <---------ARR14(2)       --------->YAB1       <   taagaccaatttcctcttttaaagttaaaacctgtatctgtaaaatgcatgagccagatattagcctcgtagatcatgctatcatgtctatcacgtgtcc  19410100                                                                                                  <--                                                                                                  ---                           ----------------->AGL3                                      --------->ALFIN1                           <-----------------AGL2                                      <---------ANAC58                           ------------>CBF                                            <---------ANAC46                           <-----------------AGL3               --------->ZAT6         <---------ANAC58              <---------AtLEC2                      <---------ARR14(2)               <---------bZIP60(2)   ---------->DOF2      --------->WOX13(1)          --------->ARR14(2)               <---------ANAC46  <---------WRKY12  --------->WOX13(1)              <---------ARR11(3)          --------->ANAC55(2)  <---------WRKY38(1) <---------ATHB12        <-----------GT1 <-----------GT1   <---------ANAC55(2) =============bZIP_DOF------------>CBF ----------->GT1--------->KAN4(2)   --------->AHL20(2)     ---- -----------HVH21 ------------>CBF   <---------ANAC46<----------TaMYB80   ----------->TBP        ----   aaggtcaaagggtttagcatgtcaatcaatccaattttggagggtatattacagtatattcgtctaaccctactctataaataggtgatgtgtgtgtcca  19410200                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                      <---------ATHB12                                                                                  ------------>CBF                                        ----------->RAV1(1)                      --------->ANAC46                                     --------->TOE2(3)                           --------->ANAC58                         <---------HSFB2a(1)                                     --------->ANAC58 -------ZAT2             --------->HSFB2a(1)                                  <---------ZAT14 ------>ZAT2----------->RAV1(1)      --------->TOE1(3)   <-----------GT1      <---------ZAT18 ----->ANAC58            <---------HSFC1(2)          <----------DOF2          --------->ZAT18 ----->ANAC58            --------->HSFC1(2)    ----------->GT1<----------DOF2 --------->ZAT14   agctccaaacaaaacaacacaacaaggagcttctcaaaacctcaacacaaggtaacttttaacccttttaatgagtctagttcactcaattaatggttca  19410300                                                                       <---------ICU4                                                                       --------->YAB1        <-------                                                                      <---------YAB1         --------                                                                    --------->YAB1  <---------WRKY38(1)                                                                    <---------ICU4  <---------WRKY12                               <---------------AtSPL8              <---------YAB1  --------->WRKY18(1)                               --------------->AtSPL3            <---------ICU4   <-----------HVH21                       <---------GLK1(2)                         --------->YAB1  <------MYB83--------                   <------------CBF<-------TEIL             --------->TOE2(3)    <------MYB46(1)               <-----------GT1 <---------------AtSPL3    --------->ARR14(2)   <---------ANAC58    ------------>CBF <---------ATHB12    ------------>CBF<---------ARR14(2)   <---------ANAC58   acaaaaaacaattcttttgaccattgattctgaaacgtacagaaacaatatggaaatgggaacctcatcatcatcatcaggcttggtcaaggccaaatct  19410400                                                              --------->TGA1a                                                              --------->O2                                                              --------->ANAC58                                                              <---------TGA1a                                                         --------->RAP2.6(2)                                                       --------->ZAT2                                                       <---------ZAT2                                                       --------->At4g35610                                               --------->ALFIN1       --------->ANAC58                                        --------->At4g35610   --------->ANAC58                                        <---------At4g35610   <---------O2                              --------->ANAC55(2) <---------bZIP60(1) --------->ANAC58                           --------->ZAT14   ===========================MYC_MYB--------->ALFIN1     -                           <---------ZAT18   ------->GAMYB --------->MYB46(3) <-----------HVH21  ---- --ARR14(2)                <---------ZAT14--------->MYB52(1) <---------LBD16  <-------MYC3      <---- ->GLK1(2)   <---------ARR11(3)        --------->ANAC46<---------At4g35610    ------->MYC3   -------- ->ARR14(2)  --------->ARR11(3)    <---------GLK1(1)   <------NtERF2  --------->ANAC46   <------ZmHOX2a(1)   gagacactcgcagaagctcttaagtccagttcacttgatttcagcaacggtgatggcagcagccacgggagcaagcagcatgtgagggctaggacattat  19410500      --------->ZAT2                                                                              <--      <---------ZAT2                                                                             <---    ------>NtERF2                                                                   <---------ANAC58   --------->DEAR3(1)                                                       ----------->HVH21    ---- -------->DEAR3(1)                                            <---------ZAT14       <---------ANAC58- ----->YAB1                                                   --------->ZAT18      <---------ZAT2<--- -----YAB1          ------->GAMYB                <------ZmHOX2a(1)    ------>ZmHOX2a(1)       <------ ->ICU4          ----------->RAV1(1) --------->ZAT6           <---------ZAT18<---------WRKY18(1) <---   catcgccgagctacagtagcaacagcaaaaacagatggaacactcacataaggaaggccaagagtgctcatcctgctcttgaccttgctggtctcactgg  19410600                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                        --------->ANAC46    <---------At4g35610                                             ----------->RAV1(1) <---------At4g35610                                                <---------ALFIN1         <------- -------MYB46(3)                                                  <-----------HVH21   <---------ANAC58 ------DEAR3(1)                                              <---------At5g28300      <---------ANAC58 ----->ALFIN1                                            --------->ARR14(2)        <---------WOX13(1) -------->ALFIN1                                 <-----------HVH21--------->SPL7--------->ICU4 ------AtMYB61            <---------ANAC58      <----------DOF2--------->DEAR3(1)<---------ICU4 -----RAV1(1)--------->DEAR3(1)        <---------ARR14(2)<---------ARR14(2)     <---------YAB1   <--- --------RAV1(1)          <---------ANAC58 ------>ZmHOX2a(1)<-----------GT1  ----------->GT1 --------   tggtgctgctcttagccgagcctctagtgcttctcttggactatccttctctttcactggattcaccgtgccacacgaagagataattgcttcagagcgc  19410700                                             <---------WOX13(1)                     <<<<<<<<<TBF1  --                                           --------->ATHB12                        <---------------AGL15      --------->YAB1                      --------->ICU4                           --------------->AGL15     ----------->TGA1                     <---------YAB1                          <-----------------AGL3     <---------ATHB12                    ------->MYC3                             <-----------------AGL1     --------->ICU4                      <-------MYC3                         <---------ANAC58  ----- --ZAT14  --------->ARR11(3)          <---------ALFIN1                        <---------ANAC58<------ -------DOF2                         <---------ZAT18                     --------->ATHB12<---------HSFB2a(2) ->ZAT14  <---------ARR11(3)     <-----------GT1                       <----------DOF2   --------->HSFB2a(2)   tgtagcaatgacgatatttgtaagaaaaccattagataccgcacatgattgaagccttgatgttaactttggactttattgggttcttcttctggtatca  19410800                                                                 <----------DOF2                              --------->MYB46(3)                <---------DAG2               --------->ARR14(3)                             ------>MYB83               --------->ARR11(3)                             -------->P               <---------ARR11(3)         --------->WRKY18(1) ------>MYB46(1)               <---------ARR14(3)    <---------ANAC46       <---------MYB59       <---------ANAC46      -------->P--------->ALFIN1     --------->AtMYB61                     ---     <---------ZAT14       --------->MYB46(3)              --------->DEAR3(2)                   <----     --------->ZAT14      --------->At4g35610              --------->MYB46(3)                   ----- ------->YAB1  --------->ARR14(2)    <---------ANAC58    --------->ARR14(2)                     ----- ---->WOX13(1) <---------ARR14(2)    <---------ANAC58    <---------ARR14(2)                 <-------- ---YAB1 --------->ALFIN1 <---------At4g35610     <-----------RAV1(2)     <---------CCA1(2) ---------   ttcatattgcagtggaagatattgaagcagcaaccagtagcgtggtcaagtttcaggcagaaccaacctttccgatatatctgaaggtaacccatttccg  19410900  Previous    Next  AGI:  At3g52310.1    Description:  ABC transporter family protein. Identical to Probable white-brown complex homolog protein 28 (WBC28) [Arabidopsis Thaliana] (GB:Q9FT51); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G06530.2); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G06530.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G06530.3); similar to Putative ABC transporter [Oryza sativa (japonica cultivar-group)] (GB:AAM51832.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39895.1); similar to hypothetical protein OsI_009842 [Oryza sativa (indica cultivar-group)] (GB:EAY88609. Range:  from: 19410356    to: 19413931    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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