Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           ------>MYB46(1)                   <---------REM1(2)                                                         ------>MYB83                    <---------ZAT14                                                       ------->GAMYB                 <-----------GT1                                                <-----------GT1                <---------ANAC55(2)                                 <---------AHL20(2)    <---------MYB59         <---------ANAC46 --->ARR11(3)                    --------->AHL20(2)   --------->MYB46(3)       <---------YAB1     --- ----ARR11(3)                   <---------AHL20(1)   ------>MYB83 --------------->AtSPL8 --------->ZAT14 ->ANAC58                       --------->AHL20(2)   -------->P <-------TEIL  <---------------------- ->ANAC58                       <---------AHL20(2)   ------>MYB46(1)  ------->TEIL   --------->ANAC46   cttaaaaaaaaaaaacacatttctcatatgtcaatttaattagttttttttttccaaccaaattggttcatgtacttgattatgtatacactatacacac  19404400                                            <-------MYC2                                            ------->MYC3                                    ----------->RAV1(1)                                    --------->ORA47(1)                                   --------->DEAR3(1)                                   ------->GAMYB                                   --------->DREB2C(2)                                   --------->DEAR4(1)                                   <---------ETT(1)                                   --------->At1g77200                                  --------->DEAR3(2)                                 --------->MYB52(1)                                ------->GAMYB                                --------->AtMYB61                                <---------ALFIN1                               --------->MYB46(3)                                       <---------ARR11(3)                               <---------MYB52(2)                                       --------->ARR11(3)            <---------TOE1(3)  <---------MYB111(2)                               <---------ETT(2)  --------->AHL20(2)           <---------MYB55(2)                               <------NtERF2  <---------AHL20(2)          ------>MYB46(1) <-------TEIL                     ------>NtERF2 ------>YAB1<---------TOE2(3) ------>MYB83  ------->MYC2      <<<<<<<<<TBF1    <---------RAP2.6(3) -TaNAC69(2)--------->DAG2    -------->P    <-------MYC3   <<<<<<<<<TBF1      <---------ANAC46   tcatataaatggataaggtagttttatagtccaaccaccgacaaaacgtgcattccacttcttcttcttcaattgccatgccgtcgtcaatatctcaaac  19404500                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                              <---------AHL20(1)                                                                              --------->AHL20(1)                                                                              --------->AHL20(2)                                                                           ------>MYB83             -                                                               <-------GAMYB  <---------AHL20(2)   <-                                                              <---------MYB46(3)                   --                               <-----------GT1         <-------TEIL        ------>MYB46(1)         --                        ----------->GT1     --------->AHL20(2)--------->MYB52(2)    <-----------GT1<-                    >>>>>>>>>TBF1         --------->AHL20(2) <-------TEIL<---------MYB59        <----             ---------->DOF2   --------->MYB52(1) <---------AHL20(2)  <-----------GT1     --------->AHL20(2)   ttgactaatataaaccaaagaagaagaagtatataacagaaccaaaaaatataaaaattcatgttcgttgtattaccaaatttaatttacacttaaataa  19404600          <---------ATHB12         ------>MYB83         ------>MYB46(1)        --------->WOX13(1)      <---------MYB55(2)      --------->MYB46(3)      <---------ATHB12     --------->ANAC58     -------->P     ------>MYB83     ------>MYB46(1)     --------->ANAC58    --------->MYB55(1)   <---------MYB55(2)   --------->MYB46(3)   <---------MYB46(2)   <---------MYB111(1)   <---------MYB111(2)   --------->AtMYB61                                                   ----------->RAV1(1)  --------->MYB46(3)                                                ------>MYB83 ------>MYB46(1)                                                    ------>MYB46(1) -------->P                                                       ------->GAMYB ------>MYB83                                                    --------->MYB46(3) -------->MYB55(1)                                              -------->P --------MYB59 --------->YAB1                                  --------->MYB52(1) ------->TOE1(2)                                            --------->ANAC58 ------->TOE2(2)                 <-------GAMYB              --------->ANAC58 --------MYB111(1)       --------->MYB52(1)                 --------->ANAC46                 -------- -------GT1 --------->WOX13(1)  --------->MYB52(2)        ---------->DOF2  ---------->DOF2   --------   acctaccaaccaatcactcaaaacaaataccagttcgttacacaatggacacttgaagttgaaagcaaccgaacaacaaaagttttaaaaactaataaaa  19404700                 <---------ICU4              <---------ICU4              --------->YAB1             --------->ICU4                            --------->AHL20(2)             <---------YAB1                          <-----------TBP          <---------AHL20(2)                    <-----------GT1          <---------YAB1                     <---------AHL20(2)         --------->AHL20(2)                 --------->AHL20(2)          <---------ANAC46         <---------AHL20(1)           <---------ARR11(3)       <---------DAG2 <---------TOE2(3)                    --------->ARR11(3)    <-----------GT1--------->ZAT18 ->AHL20(2)--------->YAB1           --------->DAG2 <---------DAG2      <---------LBD16 ->YAB1  --------->AHL20(1)       ---------->DOF2  <----------DOF2  <-----------HVH21            *TSS   atttaggtgaatataataataaggccaactatgaagaaaaggtctattttatactttttatataaccttttgtcacgggcactgtttcattcccttggac  19404800                                                                                       <---------ICU4                                                                                      --------->ICU4                                                                                    <--------ATHB1                                                                                    -------->HAHB4                                                                                    <---------ICU4                                                                                    --------->YAB1                                                                                   --------->ICU4              ------>ZmHOX2a(2)                                                    <---------ATHB51             <------ZmHOX2a(2)                                                   --------->YAB1            <---------AGP1                                                    --------->TOE2(3)            --------->AGP1                                                  ------>ZmHOX2a(2)            --------->ARR11(3)                 <-----------RAV1(1)         <------ZmHOX2a(2)            --------->ARR14(3)             <---------GLK1(2)              <---------ARR11(3)            --------->ARR14(2)             --------->ARR14(2)             --------->ARR14(2)            <---------ARR11(3)             --------->ARR11(3)             <---------ARR14(2)            <---------ARR14(2)             <---------ARR14(2)             --------->ARR11(3)            <---------ARR14(3)        -------->P  <---------REM1(1)      --------->GLK1(1)    <<<<<<<<<TBF1           <----------DOF2<---------ARR11(3)            <---------GLK1(1)         <-   cccttcttcttcaagatctgtttcttccttctttctctctaaccagattttgttgtaccagagagagagagagagagatcccttaataattcttacacat  19404900                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                         <------------------------ANAC81    <--------                    >>>>>>>>>MYB98                      <----------DOF2            --------->LBD16                  =================================HOX2a_HOX2a                    <---------ANAC58                --------->YAB1                  <---------YAB1                    <---------ANAC58     <---------ANAC58       <----------DOF2 ------>ZmHOX2a(2)                     <---------ANAC46     <---------ANAC58 ---------->DOF2     --------->ARR11(3)             --------->GLK1(1)  ---------  <----------DOF2 ------>ZmHOX2a(1)       <---------ARR11(3) <---------AHL20(2)  <---------LBD16 <--- ----------GT1--------->ARR14(2)    <---------AtMYB61<-----------GT1     <---------GLK1(1)  <--------   ttatctttcttgtctgaatcctaacaaagactttagttttggtcgatcttataattttctttttttattctatggatttctcttccgggtttcaataatt  19405000     <---------ANAC58     <---------ANAC58     <---------ANAC46     --------->ANAC55(2) ->ATHB51 -ATHB1 ->YAB1 >ATHB1                                                                       <---------AHL20(2) <--- -----ATHB5                                                               <---------AHL20(2)    ----- --ICU4<---------MYB52(1)                                                 --------->AHL20(2)    ----- -ATHB12                                                              ---------->ID1            <---- >ICU4--------->LBD16                                             <---------ANAC58   <---------HSFB2a(2) --------HVH21      <---------ANAC46                              <---------ANAC58   --------->HSFB2a(2) -ATHB51  <---------ZAT6                <-------GAMYB  ------>ZmHOX2a(1)<----------DOF2         <----   gtcacttccgtagtgtaagtacgcgtgtattgtatactagtcagttacacaagtgtccttatgtgtttccttgtctttaattcatttctgaaactgaatt  19405100                                                                                                   --                                                                                                   <-                                                                                               ------                                                                                               ======                                                                                              -------                                                                                              =======                                                                                              <------ZmHOX2a(2)            --------->GLK1(2)                                                                 -------            --------->ARR14(2)                                                               --------           <---------ARR14(2)                                                                <-------           --------->ARR14(2)                                                                <-------           <---------GLK1(2)                                                                 -------- ------AHL20(2)                                                      <---------ANAC58        -------- ---->AHL20(1)                                                       <-------GAMYB          <-------- ---->AHL20(2)            <---------AtMYB61          ------>ZmHOX2a(1)<--------P            <-------- -----AHL20(1)      <---------TOE2(3)             ---------->ID1     <---------ANAC58      ---------- -----AHL20(2)    ---------->DOF2      --------->LBD16              <---------MYB46(3) <---------HSFB2a(2)   tattcttctctcagattctgcaaaggttttggttttttctccgagtttttttgtccttcaaaaaaaactttggttgctctctctctgttcaagaagatcc  19405200 ------->ZAT2 --------ZAT2 >ZmHOX2a(2) ===============HOX2a_HOX2a -->CCA1(2) ===============HOX2a_HOX2a -->ARR14(1) ->ARR11(1) --ARR11(3) --ARR14(2)                          ---------->DOF2 ->ARR14(2)                         <---------AHL20(2) ->ARR11(3)                     --------------->AGL15 -HSFB2a(1)                     <---------------AGL15                                  <---------GLK1(2) -GLK1(1)  --------->GLK1(2)   ----------------->AGL3                <-----------GT1   <---------ARR11(3) ->ARR10 ------>ZmHOX2a(1)     ----------------->AGL2     ------>ZmHOX2a(1)            --------->ARR11(3)   gagcttgattcctaatctgtgagttttatgcattccatttaaagctctgattttgtattcctgtatcaatgtttccccctaatgttatagattttggata  19405300  Previous    Next  AGI:  At3g52290.1    Description:  IQD3 (IQ-domain 3); calmodulin binding. similar to IQD2 (IQ-domain 2), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G03040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66644.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 19404797    to: 19407381    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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