Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                ----------->RAV1(1)                                                                           <------ZmHOX2a(2)                                               <---------ANAC58           --------->AGP1                              <---------At4g35610                         --------->ARR14(2)             --------->HSFC1(2)                <---------ANAC58           <---------ARR11(3)             <---------HSFC1(2)<---------GLK1(2)                          <---------ARR14(2)     ---- --------->YAB1    --------->At4g35610         <---------ANAC46     --------->ZAT6           -------- -----MYB52(1)     <---------At4g35610----------->RAV1(1)      <---------ATHB12           --------->YAB1 ---->GT1 ---------->DOF2     --------->At4g35610            --------->WOX13(1)      --------->AHL20(2)   taattagaatgacaaagcttcttctgaatttcagcttctcccacaaattgcttatagacaattcaatcaaacactagatccaacaaaaaaaatcatcaaa  19381800                                                                              --------->ANAC58                                                                    ----------->GT1                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR14(2)                                                                --------->ARR14(3)                                                                --------->ARR11(3)                                                                <---------ARR14(3)                  -                                                                <---------ARR11(3)                 <-                     <---------MYB46(3)  --------->MYB52(1)     --------->ARR14(2)                <--           --------->ANAC58       <------ZmHOX2a(1)            <------ZmHOX2a(1)                  --- ------>DOF2      --------->TOE1(2)   --------->TOE1(3)<---------AHL20(2)     --------->ANAC58    --- ->YAB1    --------->ANAC58   --------->TOE1(2)       --------->AHL20(2)  --------->YAB1         ----   atagcagagaagaacgaaaacgttggataatacataggaaccctaacagttgagaattttatgtaggatcttgtaattagaagcaaaatccaaaacgaat  19381900               ------>ZmHOX2a(2)   ------>MYB83         --------->MYB52(1)        ------>MYB46(1)        --------->TOE1(2)     <---------ALFIN1        --------->TOE2(2)--------->LBD16     ------->TEIL       --------->DEAR3(1) -------->YAB1<------ZmHOX2a(2)  --------->DEAR3(1)                                         <------ZmHOX2a(1) --------YAB1<---------ARR11(3)  --------->AtMYB61                                       <-----------RAV1(2) -------AHL20(2)     --------->AtMYB61                                                  ------>ZmHOX2a(1) ------>AHL20(2)     <---------ALFIN1                                       --------------------->WRI1 ------>AHL20(1)    --------->MYB46(3)      <---------MYB46(3)              --------->TOE2(3) ------- ----->YAB1  --------->ARR11(3)  <---------ALFIN1  <-------TEIL  ---------->DOF2    <-----------GT1--   tataatgaaacttacgatctcgaccaccgcgaacacctcccctcgttggatgatacatcgaaaccctgaaagttgcaaccttgatttttcctcaggaggc  19382000             --------->ATHB12                                                                       <            <---------YAB1                                                                        <--       <---------ARR11(3)         <---------GLK1(2)    <---------AHL20(2)                        ---- --------->ANAC58   --------->CCA1(2)                  --------->AHL20(2)                        <--- --------->ANAC46  --------->ARR14(2)              ----------->GT1                           -------- --------->ANAC58  <---------ARR14(2)              <---------ANAC46                         --------- ---->GT1 <----------DOF2------->TEIL      >>>>>>>>>>>>>>>>>LFY                            <---------DEAR3(1) -------->DOF2 <---------WOX13(1) --------->ARR11(3)*TSS   --------->AHL20(2)     --------->MYB52(1)-   taaaagccagaactttgattggatacgaatttctcagatttttggttccaatggagtttaaataaaaacaaaaatacaaaaaacaaactgaagacggtga  19382100                                                                            -------->ABF1                                                                            <-------MYC3                                                                            ------->MYC4                                                                            ------->MYC3                                                                            <-------MYC2                                                                            ------->MYC2                                                                            <-------MYC4                                                                           --------->ANAC55(2)                                                                           =======================bZIP_DOF                                                                           --------->O2                                                                           <---------O2                                                                           <--------ABF1                                                                           <---------TGA1a                                                                           <---------ANAC55(2)                                                                      ----------->HVH21                                                                     <-----------HVH21                                                                    --------->ALFIN1                                                                   <-------MYC4                                                                   ------->MYC4                                                                   ------->MYC2                                                                   <-------MYC3                                                                   ------->MYC3                                                                   <-------MYC2                                                                  <---------TGA1a                                                                  --------->ANAC55(2)   <---------YAB1                                                 --------->TGA1a<---------SPL7 <---------ICU4                                                   <---------ANAC55(2)  ---------->DOF2 --------->YAB1                                                   <---------ANAC46  --------->ANAC58 ---------YAB1                                                    ================================bZIP_DOF -------ICU4                                                      <--------ABF1 <---------ANAC58 ----->ICU4                                                       --------->O2  <---------ANAC46 ------YAB1                                                       <---------O2  <---------ANAC58 ->At5g28300         <----------DOF2                       ==========================bZIP_DOF <------ZmHOX2a(1) -->GT1 <----------ID1              ----------->GT1        ---------->DOF2 --------->TGA1a *TSS   <-- -------->ICU4   <---------TOE2(3) <---------TOE2(3)       =================bZIP_DOF--------->ANAC58   ttattattatgggccaaataaggctttaggcccattagaggttaatagaaacaaaaacttgaaaagacacgtgtgacacgtgtcgtaagcaaagaaggag  19382200                                         ------>MYB83                                         =======                                       <---------MYB59                                        <------ZmHOX2a(1)                                       <---------MYB46(2)                                    --------                 ----------->RAV1(1)   <---------MYB111(1)                                  ---------                --------->AtMYB61    -------->P--------->ANAC46               --------->ARR14(2)            ----------->HVH21 ---------->DOF2  <---------ALFIN1               --------->GLK1(2)        <---------ZAT14    --------->YAB1------>MYB46(1)                      <---------ARR14(2)  --------->ALFIN1 --------->MYB46(3)------>MYB46(1)              --------->TOE1(3)       <---------MYB46(3) -------ZAT14  --------->MYB46(3)    ------>MYB83                 --------->TOE2(3)      --------->ALFIN1   agaagtggagagaagtgaccaccagacaattgtaaagcctacctaatccacaccgattcaattcaaaaccctaaactcaaaatccgtctcggtggaggaa  19382300                                                                                     --------->ARR14(2)                                                                                 ------>MYB46(1)                                                                                 ------>MYB83                                                                                 -------->P <--------                                                                                --------->MYB55(1)                                                                               <---------MYB111(1)                                                                               --------->MYB46(3)                                                                               <---------MYB111(2)                       ====================================HOX2a_HOX2a         <---------MYB55(2)                       ------>ZmHOX2a(2)                                       --------->DEAR3(1)                     <---------ARR11(3)      <---------ICU4    <-----------GT1 --------->AtMYB61 =============================HOX2a_HOX2a --------->YAB1   --------->DAG2      <---------MYB46(2) --->GT1             --------->ARR11(3)  <-------TEIL     ---------->DOF2--------->YAB1    <---------DAG2 -->GT1    --------->At4g35610       <---------YAB1 ------>ZmHOX2a(1) <----------DOF2<---------ARR14(2)   aaatggctgaagaagctcaagtagatcgttctaatggctctgattcatcatctcctcccataaagttacctcctttcatcaccaacctattcgcctttct  19382400                                                 --------->LBD16                                                --------->ATERF1(2)                                                <---------ATERF1(2)                                               --------->DEAR3(2)                                              ------>MYB46(1)                                              ------>MYB83                                <---------DAG2               ------>ZmHOX2a(1)              --------->MYB52(1)                     <-----------HVH21             ----------->RAV1(2)              -------->P                      --------->ANAC46            ------>ZmHOX2a(1)                --------->MYB55(1)            --------->AtMYB61           <---------ALFIN1                 --------->AtMYB61              --------->TOE1(2)  --------->AtMYB61                         <---------MYB59<---------ARR14(2)------>MYB83 <----------DOF2  --------->TOE2(3) <---------YAB1          <---------MYB111(1)            --------->TOE2(2) --DOF2  <---------ATERF1(1)           ------>ZmHOX2a(1)   --------->ARR14(2)------>MYB46(1)   tcaacctaagcctcctcctgctactattgatgccaatgctcctaaacctaccggcgagaaggaacctctgaaatcgacctacgagactgtcactttccct  19382500                <----------CDC5                                                    --------->At4g35610               --------->ZAT18                                                     <---------At4g35610           --------->DAG2                                                          <------MYB83          ---------->DOF2                     <---------At4g35610                  <------MYB46(1)       --------->MYB46(3)            <----------CDC5                               ----------->GT1      --------->ANAC58            <---------TOE2(3)     <------ZmHOX2a(1)          <---------ZAT2  --      --------->ANAC46    --------->YAB1      --------->ZAT2                     <-----------RAV1(2)      --------->ANAC58   <---------ATHB12     <---------ZAT2                ------>ZmHOX2a(1)     <-- --------->ANAC46      --------->WOX13(1)     --------->At4g35610    <-----------HVH21            ---   tacaatccacccaaaagcgcagagccaatcaagtttgaggctgagcccagctctggcaggacttccaactctgtcatcctttggcaggtgattttgttaa  19382600                                                              <---------ANAC46                                                              <------MYB83<----------DOF2                                             <---------ANAC58 <------MYB46(1)                                             <---------ANAC46<---------MYB46(3) --------->GT1                   --------->ATHB12            <---------AtMYB61 -------ARR11(3)                --------->ICU4   <---------YAB1         <-------TEIL       --------->YAB1 ------>ARR11(3)    <----------DOF2          <---------ANAC58--------->MYB46(2)           <---------YAB1   gatgtttatattttagagggttctttgatgaaaaatgatttgaattggcttataatttggggtttggtgagaggtgctttgttatgttatttatgagaat  19382700  Previous    Next  AGI:  At3g52220.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO62409.1); contains domain PTHR14580 (PTHR14580) Range:  from: 19380340    to: 19382052    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52230.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93315.1) Range:  from: 19382191    to: 19383665    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version