Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------>ALFIN1                --------->ANAC46 ----->TOE1(2)              <---------ANAC58 -----ANAC58                <---------ANAC58 -----O2                    --------->ANAC55(2) -----TGA1a                 <---------ANAC55(2)                                       <---------SPL7 -----ANAC46               <---------LBD16                            <-----------RAV1(2) -----bZIP60(2)           <-----------GT1                      ------>ZmHOX2a(2)     --------->ETT(1) ---->O2               <---------ICU4                         <---------At4g35610  <-----------HVH21 -----ANAC58         <----------DOF2                    --------->MYB52(1)  <------NtERF2 --------->TOE1(2) ---->TGA1a       --------->GLK1(2)         <----------DOF2   --------->At4g35610<---------MYB46(3)   gtgggaagggaatgaatgagtttctttattacgggccataaacgagcttattgggccataactgatctgagttcaggctgcattgggtcggaccagcgag  19336900                                                            <---------ZAT14                                    --------->ANAC46   --------->ANAC58                           <---------DEAR3(2)        <--------P                          --------->ETT(1)       <---------ANAC46                                   -          --------->MYB46(3)  <---------GLK1(1)  <---------LBD16                                    -          <---------MYB111(2) --------->GLK1(1) <---------LBD16               --------->AHL20(2)   --   --------->At4g35610  <-----------HVH21   <---------GLK1(2)<---------ALFIN1 <---------AHL20(2) ----  --------->ANAC46 --------->MYB52(1)   ---------->DOF2--------->ANAC58----------->GT1    --------->At4g35610   ttatccgctccaacaacttgataacgggtcgggtctcccagcaaaagcttctcgggtaagcctccactgaaacttgaaaatttataagtcgcatctcaac  19337000                                         --------->TOE2(3)                                     ------     --------->KAN4(2)                   >>>>>>>>>RAP2.2                                   <---------LBD16    --------->HSFB2a(1)             ------------>CBF                                  --------->YAB1    --------->HSFC1(2)             ----------->RAV1(1)                             <----------DOF2    <---------HSFC1(2)             ------>NtERF2                                  <---------ANAC46    <---------HSFB2a(1)          --------->LBD16                                  <---------ANAC58  - -------->ANAC58                --------->DEAR3(1)        --------->YAB1          <---------ANAC58  - -------->ANAC58                --------->ANAC46        --------->ANAC58       ---------->ID1-------- ------->LBD16        ----------->GT1  --------->GLK1(2)--------->ANAC58     <-----------RAV1(1)   -- --->GAMYB--------->LBD16     <---------At5g28300    <---------ZAT18     <XXXXXXXXXXXXXXXXXXXXMIR863-3P   gcgcgaaaattccgaaattatagagggaaaatcaccgcgacaatctaaaattttggacactcaaaatcccaaattagtcttgttgctttcatcaccggaa  19337100                                                                                         ------>ZmHOX2a(2)                                                                                        --------->GLK1(1)                                                                                        <------ZmHOX2a(2)                                                                                       <---------AGP1                                                                                       --------->ARR11(3)    --------->ANAC58                                                                   --------->ARR14(2)    --------->ANAC58            <---------ANAC58                                       <---------ARR14(2) --->ARR14(2)                   <---------ANAC58                             ----------->GT1 -------->ANAC58             <---------MYB52(1)                          <---------TOE1(3) -------->ANAC58            <---------DEAR3(2)                           <---------TOE2(3) ->LBD16        ------>ZmHOX2a(2)                                       ---------->DOF2<---------ARR11(3) ------->WOX13(1)         <------NtERF2       --------->MYB52(2)     <----------DOF2  <---------CCA1(2)   tcactcaagcttcttcgatctctctcgcgtcgtttcgtttccaaatgttagttttcttctattcattttttctttaaagttgttacacagatctcaaaac  19337200                                        <--------P                                     <---------TOE2(3)                                     --------->MYB59                                     <---------TOE1(3)                                --------->ICU4                           --------->YAB1                         <------------CBF                       --------->AHL20(2)  <------ZmHOX2a(1)                        --------->ANAC55(2)                       <---------AHL20(2) ----------->GT1                          <---------TOE2(3)       ----------->GT1 --------->AHL20(1) <------MYB46(1)             <------------CBF     <---------YAB1     <------------CBF  <---------AHL20(1) <------MYB83   <------------CBF         <-----------GT1   tagatcgaattgtaagaaatcgaaatttattgtaatgtttaggtaggagaaaacccagttattgaatcgttgaattgagtccatttacgttttctgatta  19337300                                                                             --------->REM1(1)                                                                       <--------P                                                                     --------->ATHB12                        --------->WRKY12                 --------------->AtSPL8                        ----------->HVH21       --------->ARR11(3)   <---------MYB46(3)                  ------->TEIL                  <---------ARR14(2)  <---------YAB1                 <-             <---------At4g35610               <---------CCA1(2)  --------->YAB1       --------->ANAC58             --------->At4g35610           --------->AHL20(2)    <---------YAB1        --------->ANAC58   cagcttgaagatgggagatgaaactgttgacggtatcgaagccaagtatatatctggtctcagtactataatggttgctacaattcaagaagccaaggat  19337400                                                                         --------->DAG2          <------ZmHOX2a(2)                                 ---------->DOF2                         <         --------->ARR14(2)                      --------->WOX13(1)     ---------->DOF2             <         <---------ARR14(2)      <---------MYB52(1)     --------->ARR14(2)           <---------GLK1(2)         --------->AGP1        ----------->GT1<-----------GT1    <----------DOF2    <---------At4g35610 --------GLK1(2)   <---------AHL20(2)<-----------GT1    <---------ARR14(2)----------->GT1           <   agaatttctcagatcgagtatattttttgtagccagttatttccaaattttcaatccaaatccaaagcttttgaaaaagtttattcagaagctcgtcttg  19337500       <---------YAB1                                             --------->GLK1(2)               <--    <---------YAB1               <---------MYB46(3)<---------ARR11(3)                             --- ---------ANAC58              ------------>MYB.PH3(2)    <---------TOE2(3)         <---------At4g35610 ---------ANAC58           ---------->DOF2         --------->ARR11(3)--------->MYB52(1)  <------ZmHOX2a(1) ---------ANAC46   --------->CCA1(2)    <------ZmHOX2a(2)<---------TOE1(3)         --------->At4g35610   ctgcttgtgatacttggaaagatagagagaaaagtttgttagatcagattgaagagcttaaggtagagaatcaacagattaagtcagataaggagaagtt  19337600                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                            ------>ZmHOX2a(2)                                                                                           --------->CCA1(2)             XXXXXXXXXXXXXXXXXXXX>MIR844                                                   <------ZmHOX2a(2)          ----------->GT1                                                                 <---------ARR14(2)     --------->ARR11(3)                                         --------->ATHB12          <---------AGP1     <---------ARR11(3)                                        <------ZmHOX2a(2)          --------->AGP1 -------At4g35610                               <---------REM1(2)       ---------->DOF2   --------->ARR11(3) ------>At4g35610    <----------DOF2 <---------WOX13(1)  --------->REM1(1)                <---------ARR11(3)   agctgaagaacttggtaaaactgcttctatgcctcttagattgacgagtctacaaggctacatcgatcatttgaaaaagaagatgaagagtagatctaag  19337700   <------MYB83   <------MYB46(1)  --------->MYB46(2)  <---------MYB46(3)  --------->MYB111(2)                        <-----------RAV1(2)                                 ----  --------->MYB55(2)                    =================RAV                                     <---  --------->MYB111(1)                   <---------MYB46(3)                                 <---------WOX13(1)  <---------DEAR3(1)             <-------GAMYB<---------TOE1(2)                           >>>>>>>>>ARR1  <---------AtMYB61             --------->MYB52(2)                                        >>>>>>>>>ARR2 <--------P                     <---------MYB46(3)                                       --------->ATHB12 <---------MYB55(1)             --------->MYB46(2)  <---------TOE2(3)                   <---------YAB1 -------GAMYB                 <---------MYB52(1)    <---------TOE1(3)           ----------->GT1  <--- ------->ATHB12               <--------P<---------REM1(1)                      ----------->GT1  <---- --------MYB46(3)      <---------YAB1   <-----------RAV1(1)      --------->At4g35610 --------->ICU4   atggttggtgatgcaagagatttgtattataggttagttgagttgttgcaggttaagggtttggatgagcttagcgaagatgggataaatatgattgttt  19337800  Previous    Next  AGI:  At3g52115.1    Description:  ATCOM1/ATGR1/COM1 (ARABIDOPSIS THALIANA GAMMA RESPONSE GENE 1, GAMMA RESPONSE 1). Identical to Protein gamma response 1 (GR1) [Arabidopsis Thaliana] (GB:Q9ZRT1;GB:Q9SUZ3); similar to protein transport protein-related [Arabidopsis thaliana] (TAIR:AT5G52280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15074.1); contains InterPro domain Prefoldin (InterPro:IPR009053) Range:  from: 19337311    to: 19339301    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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