Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <-----------------AG                                    <---------ANAC46          ----------------->AGL1               --                                    <---------ANAC58          <-----------------AGL1          -------                                    <---------ANAC58     --------------->AtSPL8           -----------                                  ------->TEIL           <---------------AtSPL8       <---------AHL20(2)                    --------->HSFB2a(2)           --------->ANAC46                   --------->AHL20(2)      <---------ARR11(3)      ------->TEIL  --------->At4g35610                   ----------->GT1 ---   <----------DOF2  <---------HSFB2a(2)--------->ATHB12  --------------->AtSPL3  ----------->GT1  <--   ttcttctttatcttctatacatctagaatatgtatgtagcttgattagcttcacgagaagaggtacctgcttagggaaacaagaggtttaaattgtaaaa  19333900                                                                                            ------->GAMYB                                                                                           --------->MYB46(3)                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                         ----------->RAV1(1)                                                                                        <---------WRKY12                                                                                      <-----------HVH21                                                                                     --------->ANAC46                                                                                    ------->MYC3                                                               ----------->RAV1(1)  <-------MYC3                                                           --------->MYB46(3)      --------->ANAC58                                                         ----------->RAV1(1)       --------->O2                                                         ------>MYB83              --------->TGA1a                                                         ------>MYB46(1)           <---------TGA1a                                                       ======================================MYC_MYB                                                       --------->MYB46(3)          =================MYC_MYB                                                       ------->GAMYB               --------->ANAC46 ------->CCA1(2)                                      --------->ANAC46             --------->ANAC58 --->DOF2                                          <---------WRKY38(1)             <---------O2 >GT1                                              <---------WRKY12          <---------WOX13(1)   --- ------>ARR11(1)      --------->ANAC58        ===============================================bZIP_DOF -------ARR11(3)      --------->ANAC58        ---------->DOF2 --------->MYB46(3)   <---------ALFIN1   gatttgagaagaatgaattcaaacaagcatttgatgactcaagacttgtaaagtcaacccaacaacaacacatgatgtaattgccacgcgtcaacagaca  19334000               <---------ANAC46              <---------At4g35610              <---------LBD16                                              --------->ANAC58        --------->HSFB2a(1)                                                --------->ANAC58        <---------HSFB2a(1)                                                --------->ANAC46        <---------HSFC1(2)                                                 --------->ANAC55(1)        --------->HSFC1(2)       <---------AHL20(2)                        --------->ANAC55(2)     <-     <------ZmHOX2a(1)           <---------AHL20(1)                        <---------ANAC55(2) ------ --------->TOE1(2)     <---------ICU4      --------->ANAC46               <---------LBD16--------->AHL20(2) --------->TOE2(2)<---------ARR14(2)   <-----------GT1                  <---------ARR14(2) ---------- ------>MYB52(1)--------->LBD16  --------->AHL20(2) --------->TOE2(3)--------->ICU4      <---------AHL20(2)   taacgtaggacccttctgcggataagaattaccaaaaaattttacacaaaaaaacattatttggatgagaaatgaatacggaactagggaattaaaagtg  19334100                                         --------->YAB1                                   <------MYB83                                   <------MYB46(1)                        --------------->AGL15                        <---------------AGL15                                               <--------  <---------ETT(2)     ----------------->AGL3               ----------->GT1                 <--------  --------->ETT(2)     <-----------------AGL2             ---------->DOF2                  --------->MYB52(1) --------DEAR3(2)      ----------------->AGL2     --------->YAB1                 --------->ALFIN1 --->ALFIN1            <-----------------AGL3    <---------ZAT6  <---------YAB1 ===================== >DOF2    ---------->DOF2        <--------P  <---------YAB1--------->DAG2       <-------GAMYB -------   tcggtctacaaatatagcagtagatgctagaaatggtagggaatcatatgagtgataacataaagttaaaattgagtttgggagttgtggaattaagggt  19334200       <---------ICU4      --------->ICU4  <-------MYC3  ------->MYC2                                                                        --------->YAB1  ------->MYC3                                                                       <---------YAB1  <-------MYC2                                                                <---------ANAC46 --------->O2                                                                 <---------ANAC58 --------->TGA1a                                                          <------MYB46(1) --------->ANAC58                                                         <------MYB83<---------ICU4 --------->ANAC58                                                        --------->MYB46(2) --------->ANAC46                                                        --------->MYB111(1) <---------ANAC55(2)                                             <---------DAG2    --------->YAB1 <---------O2                                                ------------>CBF <---------ANAC58 --------->ANAC55(1)                                        <-----------GT1  <-------TEIL --------->ANAC55(2)                                   --------->TOE2(3) --------->MYB59            - <---------TGA1a          <---------CCA1(2)          <---------TOE2(3)   --------->MYB52(2)  -------- ----------->GT1        <---------CCA1(2)            <---------TOE1(3)   --------------->AtSPL8   --- -TOE2(3)        ------>MYB46(1)                    --------->MYB52(1)  <---------MYB55(1)  --------- -TOE1(3)        ------>MYB83                     <---------MYB52(2)   <---------MYB52(1)   --------- ==========MYC_MYB<---------ATHB12               --------->At4g35610   <<<<<<<<<MYB98--------->ICU4-- ---->GT1     ------------>CBF          <------------CBF<---------MYB52(1)--------->ANAC55(2)<-------   aacacgtgataatgaaaccaatcttcttatctcttcttcacttattgaatcatctaacgttatttcaatttttgttaggtacttgtaataataacccaaa  19334300                               --------->ARR14(2)           --------->YAB1      <---------ARR14(2)          *TSS           ------>ZmHOX2a(2)         --------->AHL20(1) <---------ANAC58         --------->AHL20(2) <---------ANAC58                                           <---------YAB1        --------->YAB1 --------->ARR14(2)                                              --------->ANAC46      --------->AHL20(2)<------ZmHOX2a(2)                                              --------->ANAC58 ---------->GT1        --------->ARR11(3)                                   --------->At4g35610 ------->AGL15         <---------ARR11(3)       ------------------------>ANAC81        --------->ANAC58 ------->DOF2          <---------ARR14(2)       --------->MYB52(1)   <-----------RAV1(1)           <- -------->AGL2     <-----------GT1   --------->LBD16             --------->AHL20(2)  <-----------GT1 -------->AGL3     --------->YAB1   --------->LBD16        <------ZmHOX2a(1)<---------At4g35610   <-- ------->DAG2 <---------AHL20(2)   <---------LBD16        ----------->GT1   --------->ZAT2   <------- --------AGL15--------->AHL20(2)   ----------->RAV1(2)   ----------->GT1    <---------ZAT2   <-------   taaagcaaaaaaataataaaatcacgatctgcgtttcccctgaaaaaaaaaaacagagagaggaaaaaaaaatgttgcagctgtttttcacgatagcgtt  19334400             <---------TOE1(3)             <---------TOE2(3)            <---------DOF5.7(2)          <---------MYB52(1)        <---------ANAC46       <------NtERF2       --------->RAP2.3(1)      ------>NtERF2      --------->ABI4(2)      <---------RAP2.3(1)      <---------ATERF1(1)     --------->DEAR3(1)     --------->RAP2.3(2)     --------->RRTF1(3)     <---------DEAR3(1)    --------->ORA47(2)    --------->RAP2.3(1)    --------->RAP2.6(1)    --------->ERF1    <------NtERF2    --------->ATERF1(1)    --------->RRTF1(1)    --------->DEAR4(2)    <---------ABI4(2)   <---------RAP2.3(1)   <---------DEAR3(2)   ------>NtERF2   --------->ABI4(2)   <---------RRTF1(1)   <---------ORA47(2)   <---------ATERF1(1)   <---------DEAR4(2)   <---------ERF1   <---------RAP2.6(1)  <---------ATERF1(2)  <---------RRTF1(3)  <---------RRTF1(2)  --------->DEAR3(1)  <---------RAP2.3(2)  <---------RAP2.3(3)  --------->ATERF1(2)  <---------DEAR3(1) <------NtERF2 --------------------->WRI1 --------->ATERF1(1)                            <---------MYB46(3)                     ----------->GT1 <---------ABI4(1)                  <---------ARR11(3)                                <------MYB46(1) --------DEAR3(1)          ------>NtERF2 ----------->HVH21                            <------MYB83 -------HSFB2a(2)         --------->DEAR3(1)   --------->ALFIN1                   <------MYB83 --ANAC58 --------->DOF5.7(2)       --------->ARR11(3)                            <------MYB46(1) --ANAC58<-------GAMYB   --------->DEAR3(2) <---------DEAR3(1)     <------ZmHOX2a(1)<--------P   ctcggcggcgccgttaacgttgtacataccgccgataagatgtttgacggtgtttgtggagacgatggaggagatgggaatggaaggtagggtttatagc  19334500                               <---------WRKY12                               <---------WRKY38(1)                              --------->WRKY18(1)                             <-----------HVH21                      ------>ZmHOX2a(1)                            <------MYB83                 ------>ZmHOX2a(1)                         <---------ANAC58         ----------------------->TaNAC69(2)                         <---------ANAC46      <---------ANAC58--------->ANAC58                         <---------ANAC58 --------->ATHB12     --------->ANAC46                <-----           ------>ZmHOX2a(1)<------MYB46(1)    <---------ANAC58--------->ANAC58           <-------TEIL    <----------DOF2 --------->ARR14(2)  <---------HSFB2a(2) <---------REM1(2)          <---------YAB1    <---------DAG2  <---------GLK1(2)   --------->HSFB2a(2)<-----------HVH21      <---------ICU4   tggagactttttcctcgagccagaattgcttggtcaaggcttctcgattgcttcttctcctcttcacgtcctctctcttcttaaaaattatgttcgtctt  19334600                                                                                               ------                                                              --------->MYB59                  ------                                                              <---------TOE1(3)              <-------                       --------->TOE2(3)                      <---------TOE2(3)              --------            --------->CCA1(2)                              --------->CCA1(2)            <---------MYB46(3)           --------->ARR11(3) <-----------GT1           <---------TOE2(3)            <---------MYB46(3)       --------->REM1(2)------>ZmHOX2a(1)        --------->AHL20(2)                <-------GAMYB -----DOF2 <---------ARR11(3)<-----------GT1     <---------AHL20(2)               <-----------RAV1(1)   tcttctccttgtagatatatgttctccttaatttcccttcttgatatgtttttaatttgagatttaggtttttgggttttggttctgttgttgttgatct  19334700        <---------YAB1      --------->ATHB12      <---------ICU4      -------->HAHB4     <---------YAB1     --------->ICU4 <---------AHL20(1)     --------->GLK1(1) --------->AHL20(1) ------>ZmHOX2a(2) <---------AHL20(2)--------->At4g35610 --------->AHL20(2)<---------At4g35610 --->YAB1         --------->ARR14(2)  <----------DOF2 >ZmHOX2a(2)      <---------ARR14(2)<---------YAB1                                                  - --ARR11(3)       ------->TEIL    <---------CCA1(2)                ---------->DOF2                  < ->ARR11(3)       <---------AGP1--------->TOE2(3)    <---------ATHB12                  --------->ARR14(2)   taataaaatgattagagatggatctgaattctaatcttatctttattttaaacaaatcgttgtatgtgtaaaagtaagagattgaatcaaatttgcccag  19334800  Previous    Next  AGI:  At3g52105.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93876.1) Range:  from: 19334310    to: 19334805    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g52110.1    Description:  similar to hypothetical protein OsI_009975 [Oryza sativa (indica cultivar-group)] (GB:EAY88742.1); similar to Os03g0174200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001049125.1) Range:  from: 19334750    to: 19336646    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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