Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ------>ZmHOX2a(2)                                 ====================================HOX2a_HOX2a                                =====================================HOX2a_HOX2a                                <------ZmHOX2a(2)                                <---------At4g35610                                --------->CCA1(2)                               --------->ARR14(2)                               <---------ARR11(3)                               <---------ARR14(2)                               <---------AGP1                               --------->AGP1                               --------->ARR11(3)                              --------->GLK1(1)                              <---------GLK1(1)                                                    -- -----NtERF2          --------->AtMYB61     ----------->GT1            <---------DAG2              -- ------DEAR3(1)      --------->MYB46(3)    --------->MYB59             <----------DOF2     --------->ANAC46 --NtERF2         --------->ANAC58     --------->ARR11(3) ---------->DOF2                  --------->ANAC58 ---DEAR3(1)      --------->ANAC58   <---------YAB1    *TSS   <------ZmHOX2a(1)            --------->ANAC58   cgtcgtcttcgaagtcactcacgaccatcgagagatctgatgattttggtaaaatatcaaaaaaggacttcaacttttcacttaagtcaaaacaagcccc  19325600                                            <-----------RAV1(1)                                          <----------DOF2            <---------MYB52(1)        <---------ANAC58       --------->GLK1(2)              <---------ANAC58    <---------AHL20(2)                <---------ANAC46    --------->AHL20(2)               <-------TEIL    <---------AHL20(1)            --------->ZAT2    --------->AHL20(1)            <---------ZAT2            ----------->GT1   --------->AHL20(2)             --------->At4g35610       <---------ZAT6      <-----------GT1   <---------AHL20(2)             <---------At4g35610    <------ZmHOX2a(1)     --------->AHL20(2) --------->TBP               <---------ANAC58     <---------ZAT18       ----------->GT1 ------->AHL20(2)            <---------ANAC58     --------->ZAT18     <---------At4g35610   tataaataaattctgttatttaagccttgaggcttgagctgcgtctttgttgttcactaggagagttatttgagcggataatttactaaaactgaatgtc  19325700                                                       --------->At4g35610                                                       <---------STY1(2)        <---------TOE2(3)                                                      --------->MYB52(2)       ---------->DOF2                                                    <---------MYB52(1)       <---------YAB1                   --------->ANAC55(2)             --------->TOE1(3)   --------->AHL20(2)                  <---------TOE2(3) ---------->DOF2--------->TOE2(3)----------->GT1                 <-----------GT1  <---------AHL20(2)--------->DOF5.7(2)<---------AHL20(2)    <-------   catctcccaaacaaacattttacgttttcatgttatataaaagaatactatatcgttagctagaatattgtagttaaatattaaagtagtgtattttaca  19325800                                       --------->YAB1                                       ----------->GT1                       <------ZmHOX2a(2)                                   <---------WRKY12                         <---------ARR14(2)                  <----------DOF2  <---------WRKY38(1)                      --------->ARR14(2)                <---------YAB1    --------->WRKY18(1)                  --------->DAG2             ---------->ID1 --------->ATHB12                          ---------->DOF2      --------->ANAC46 ----GT1 <----------DOF2   <---------YAB1                      ----------->GT1------>ZmHOX2a(2)   ttttgtctgaactttgtcatctttgtttcatgaatggtcaatggtgaataatggggagagaaggaacgtgaataaagggatccacaagtgtctccaccat  19325900                                                                  ----------->GT1                                                    ---------->DOF2     ---------->DOF2             =                      ------>ZmHOX2a(1)          ----------->GT1  <----------ID1                    <                      <----------DOF2          <------------CBF  ------------------------>ANAC81-----               --------->YAB1                 ------>MYB83----------->GT1                      ======            --------->WOX13(1)                ------>MYB46(1)   ---------->DOF2                ------   tttctgagtaaaaacaatcacatcctttcattttcaaacccctaaaccaaattgtaaagtcagaaaaaaagaaaaaaagaaacacacatacaaatcgaaa  19326000                        ---------->DOF2                     <---------YAB1                     *TSS                    ------------>CBF                --------->O2                --------->ANAC58                --------->bZIP60(2)                --------->ANAC58                ===================bZIP_DOF                --------->TGA1a                <---------O2                --------->ANAC46                <---------TGA1a         <---------At4g35610         --------->At4g35610                       --------->ZAT14 =========================bZIP_DOF                 <---------ZAT14 ----------DOF2<---------TOE2(2)                 --------->MYB46(3)                        --------->MYB52(2) ---->DAG2     <---------TOE1(2)           --------->DAG2                                  <---------MYB46(3) =========================bZIP_DOF         <---------TOE2(3)  --------->ICU4  ----------->RAV1(1) ---->DOF2    <---------ALFIN1      <-----------------AGL1  ---------->DOF2  --------->REM1(1)  <----   agcttttcttcatctcccacgttacaataagccctaagaacgaataaggcaactacagagagaaaagatgaattcaactacaacaaaaaacgtttgtgga  19326100                        ----------------->AGL1                        <-----------------AGL1       --------->ATHB12                      --------->ANAC46     --------->GLK1(2)                      --------->ANAC58    <---------GLK1(2)         --------->TOE2(3)                --------->ARR11(3)         --------->TOE1(3)                --------->ARR14(2)                      ------>ZmHOX2a(1)   --------------->AtSPL8                 <---------ARR14(2)                --------->HSFB2a(1)   <---------------AtSPL3<-----------RAV1(2)         <---------ICU4    --------->SPL7   <---------ARR11(3) ------ID1            --------->ANAC58    <---------ARR11(3)         <---------SPL7   <---------MYB52(1)   gacaaatggtaccttaacctagacaggccagaagaggcattgaagattcttgtattcattgccattttcgtcgtccgaactctcctccattatctcatga  19326200                           ------>MYB46(1)                         --------->DREB2C(2)                         ------->GAMYB                         --------->DEAR3(1)                      --------->DEAR3(1)            <---------DAG2 ------>MYB83       --------->AHL20(1)            --------->TOE1(3)        ------->TEIL         <----------DOF2            --------->TOE2(3)     <----------DOF2<----------DOF2            --------->AtMYB61<----------DOF2  --------->ARR11(3)          ------>MYB46(1)--------->DEAR4(1)   <---------AHL20(1)          ------>MYB83<---------ALFIN1        <---------ARR11(3)         <---------YAB1          -------->P  --------->AtMYB61      --------->RVE1(1)        <----------DOF2           <----     --------->ANAC46--------->MYB46(3)      --------->CCA1(1)  <---------CCA1(2)  --------->YAB1   agcctctaggccaaccttacctcaccaccgactttgctgtatgtcaaatatctttttgttctttgtctatctcttttgatttctatattaactcaaattt  19326300                                          <---------ANAC46                                    <---------TOE2(2)                                               -         <---------ARR14(2)         <---------TOE1(2)            --------->ZAT6      <---------YAB1 <         --------->ARR14(2)         <---------TOE2(3)      ------>NtERF2         ----------->RAV1(1)-     <---------At4g35610     --------->KAN4(1)         <---------LBD16     --------->ANAC46        <- -------GT1  ----------->GT1 <---------KAN4(1)        <---------LBD16     ------->GAMYB    <---------GLK1(2)   tctatgcatcagatagggctaattctaggtaatattccaaggtttcgaggggcattctcggggccttactctataaccctcaacaacataatagaatttg  19326400                                                                       <-------TEIL                                                                 ---------->DOF2                                                                ------->GAMYB                                                               <---------MYB55(2)                                                               --------->MYB46(3)                                                              -------->P                                                              ------>MYB83  --------->ATHB12                                                              ------>MYB46(1)                                                             --------->MYB55(1)            <---------YAB1                                  --------->AtMYB61    ------>ZmHOX2a(2)                                       --------->DEAR3(1)   --------->At4g35610                                      <---------MYB111(2)   <---------At4g35610                                      <---------MYB55(2)  <---------ARR11(3)                                        <---------MYB46(2)           --------->ANAC58  --------->ARR11(3)                                        --------->MYB46(3)       --------->ANAC46 ---------->ARR10                                           <---------MYB111(1)  <---------ANAC58  -- ---------KAN4(1)                                          --------->MYB46(3)    <---------ANAC58  -- -------->KAN4(1)          <---------HSFB2a(2)           --------->AtMYB61  <---------ICU4 --------->YAB1 --------KAN4(2) <-----------HVH21  ------->TEIL        --------->MYB46(3) <-------TEIL  --------->ANAC58   gaatgatctgccatatgtttgtcatgggtctagagatgaatccaagcgttcttctcagaccaccaaccaaagatgcattcattgcctacacaagcatgat  19326500  Previous    Next  AGI:  At3g52072.1    Description:  other RNA Range:  from: 19323662    to: 19325555    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52080.1    Description:  CHX28 (cation/hydrogen exchanger 28); monovalent cation:proton antiporter. similar to ATCHX15 (cation/hydrogen exchanger 15), monovalent cation:proton antiporter [Arabidopsis thaliana] (TAIR:AT2G13620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40816.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 19326021    to: 19328821    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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