Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ALFIN1                                                <---------ANAC46                                               --------->ALFIN1                                               <---------DEAR3(1)                                               <------NtERF2                                              ------>NtERF2                                             <---------ANAC46                                             --------->DEAR3(1)                                            --------->ATERF1(1)                         <------MYB46(1)    <------NtERF2                         <---------MYB46(3)<---------RRTF1(1)                     <---------MYB46(3)    ------>NtERF2                            --------->ALFIN1                     <-----------RAV1(1)   <---------RAP2.3(1)                     <-------GAMYB                   <-------GAMYB           <---------ERF1                          <------NtERF2                  --------->MYB111(2)      <---------DEAR4(2)                     <---------DEAR3(2)                  --------->MYB55(2)       <---------ATERF1(1)                    <---------MYB46(3)                  <---------MYB46(3)      <---------RAP2.3(3)                    <---------DREB2C(2)                  --------->MYB52(2)      <---------RRTF1(3)                     <---------DEAR3(1)                <-------GAMYB             <---------DEAR3(1)                    <---------ABI4(1)               <---------MYB46(3)         <---------RAP2.3(2)                 <---------DEAR3(1)              <---------DEAR3(1)        <---------ATERF1(1)                  <---------At4g35610            ------------>AtMYB77       ----------->HVH21                     --------->At4g35610           ----------->HVH21    <------ZmHOX2a(1)--------->At5g28300       <---------WRKY12    --------->At4g35610  <------MYB83--------->CCA1(2)                     <---------WRKY38(1)    <---------At4g35610 <---------AtMYB61--------->ATERF1(1)             <-----------HVH21      -----   agagggagatgagacgacggttgttgttggtggaggaagagacgacggcgcggtggaagagagagaggtcgtctaggtcatcggcggtggaaatgagggt  19322900                           <------ZmHOX2a(1)                   <---------ANAC46                --------->ALFIN1                  ---------->DOF2              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  <---------ZAT14  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)------------------------>ANAC81                 --------->ZAT14 <------ZmHOX2a(1)--------->ALFIN1  <------ZmHOX2a(1)       <------ZmHOX2a(1)       --------->ALFIN1- ---->ALFIN1<------ZmHOX2a(1)     ------------------------>ANAC81          <---------KAN4(2)        <   agaggaagagagaaggatgtgtggtgagaggatgaagaggaagaagagaagagaaagagagaggaagagagatagagaataaacgagtgtagaagatgag  19323000                                                 >>>>>>>>>TBF1                                  <----                                              >>>>>>>>>TBF1                                     -----                                           >>>>>>>>>TBF1        --------->ATHB12                <----                 ----------->RAV1(1)<------ZmHOX2a(1)         <---------WOX13(1)                =====                --------->MYB46(3)<---------TOE2(3) >>>>>>>>>TBF1 <---------WOX13(1)      --------->GLK1(2) -------->ARR11(3)      <---------GLK1(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxx ---------ARR11(3)   --------->ANAC46   >>>>>>>>>TBF1  >>>>>>>>>TBF1              ----------->GT1 ---   aacatctctctgtatacaacaacacagaatttctctgaggaagaagaagaagaagaagaagaagattgattgaaatgaatgagttagaaaaaattctgat  19323100                                  <---------At4g35610                               --------->TGA2(2)                              <-----------HVH21                              <-----------TGA1                             --------->O2                             <---------ANAC55(2)                             --------->TGA1a                             <---------TGA1a              <---------YAB1                             <---------bZIP60(1)        --------->AHL20(2)                             <---------TGA2(1)          <---------AHL20(2)                             <---------O2              <---------AHL20(2)              =========================bZIP_DOF  <-------MYC2              ============================================bZIP_DOF          <----------ID1    ----------->STF1     ------->MYC2         ----------->GT1    <-----------STF1     ------->MYC3       ================================bZIP_DOF  <-------MYC3       ---------->DOF2     <---------TGA2(2)    <---------TGA1a     --------->YAB1     --------->YAB1          --------->TGA1a     --------->AHL20(2) <---------ICU4          --------->O2  --------------->AGL15--------->ICU4           <---------O2 -----bZIP60(1)   ----------->GT1 --------->At4g35610  --------->ICU4 ---->bZIP60(1) --------->DAG2<<<<<<<<<<<AtbZIP1<---------ANAC55(2) <---------AHL20(2) -----TGA1a   ---------->DOF2--------->bZIP60(1)--------->ANAC55(2) --------->ATHB51 =================bZIP_DOF----------->TGA1      --------->ANAC58    --------->ATHB12 xxxxxx>smallRNA(si3) <---------KAN4(2)         ----------->GT1     --------->AHL20(2) -------->HVH21--------->DAG2--------->TGA2(1)  --------->ANAC58   <---------AHL20(2)        <-------   gtgacaataaaaaggaaaaaggggaataatgacgtcagcaaaatggggacacgtgaaattatttttaaaattatttgggacaatcgacacagttgctcta  19323200                                                  <-------TEIL                                                 --------->ARR14(1)                                                 --------->CCA1(2)                                                --------->ARR14(2)                                                <---------ARR14(2)                                                --------->ARR11(1)                                              ----------->ARR10                                          -------->HAHB4                    <---------TOE1(3)                   <---------MYB46(3)     <---------ICU4                    <---------TOE2(3)             --------->ALFIN1             --------->YAB1              --------->ARR14(2)           <---------O2                  --------->ICU4          -------->P---------->DOF2        ---           <---------ANAC46             <---------AHL20(2)      *TSS  <---------ARR11(3)          ---           <---------ANAC55(1)         --------->YAB1          --------->MYB46(3)                <---           <---------ANAC58           <---------AHL20(2)      --------->At4g35610             -------           <---------ANAC58          --------->AHL20(2)       <---------At4g35610        <---------AHL20(2) <----------DOF2<---------PCF2    <---------AHL20(2)         --------->ANAC46     <---------At4g35610 ---DOF2   --------->ANAC55(2)    --------->AHL20(2)----------->GT1   <---------GLK1(2) --------->AHL20(2)   tcgctatttgtttacgtggggctgttctctctctatttatataataatgagatacggttttttcagcaaccagattttaaagttatctgattaaatctaa  19323300        <---------ZAT6                                                        <---------ICU4   <------ZmHOX2a(1)                                         <---------ANAC58--------->ICU4 ----->HAHB4                                       --------->AHL20(2) <---------ATHB12 ------>YAB1                                  --------->ICU4 <---------ANAC58<---------YAB1 ------YAB1                          <---------DAG2<---------AHL20(2)--------->ANAC46             --- -------->AGL15<-----------HVH21     <----------DOF2     <----------DOF2   --------->YAB1   <--------   taataggatagagatagagtcacagagacatgttgttgactttatgacattattttattctttgcttatccactcagtcatcatttatctcaccagtcag  19323400                                           <---------MYB59                      <---------AHL20(2)                              <---------ANAC58                  --------->GLK1(2)                              <---------ANAC58                  --------->ARR14(2)        <---------MYB46(3)   <---------HSFB2a(1)               <---------GLK1(2)<---------AHL20(1)     <-----------RAV1(1)     --------->HSFC1(2)             --------->YAB1      --------->AHL20(2) ------>YAB1                 <---------HSFC1(2)           --------->AtLEC2 <------ZmHOX2a(2) ---HVH21                    --------->HSFB2a(1)  ----------->RAV1(2)<---------MYB52(1)   acataatgtgttgttgttgtgaatttgtagatgcttccgactatacctgattacctggccattcagaatcggtttggatcaaaaaatttgggttttcggt  19323500                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                          ------->TEIL                                                                         <---------CCA1(2)                                                                     <---------ANAC58                                ------->TEIL            <------MYB83 <---------ANAC58     --------->ALFIN1            --------->MYB52(1) --------->MYB52(1)       <------MYB46(1)--------->ALFIN1  ------->MYC3          <---------MYB52(2) <---------MYB52(2) ------>NtERF2        <---------ANAC46    <-------MYC3   ttagaaatcgaaacaaaccgaattagttgaaacgaaccgaatagaaattcggccaatttggttttgcattggcgtgtaccttgtgactacatgtgtgtgt  19323600                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                     ------>ZmHOX2a(1)                                                          <---------YAB1                                                       --------->GLK1(2)                --------->ANAC46                      --------->ARR14(2)             --------->MYB46(3)                       <---------GLK1(2)         ------>ZmHOX2a(2)                            <---------ARR11(3)        <------ZmHOX2a(2)                             --------->ARR11(3)    <----------DOF2       <---------ARR11(3)                <---------MYB52(1)XXXXXXXXXXXXXXXXXXXX>MIR779.1       --------->AGP1           <---------YAB1        <---------ARR14(2)<---------ZAT18       --------->ARR11(3)     <---------ICU4<---------TOE1(3)<---------RVE1(1) <---------YAB1 --------->At4g35610         <---------ATHB12     --------->YAB1 <-----------GT1 <---------At4g35610   <-----------GT1---------->ID1<---------YAB1<-----------GT1               *TSS   gttagatgagatctatccacccatttttcaaatcatttttgtcgttaagctatcaagattctgatattttcctgctcacttttgattcccaaaacaaaaa  19323700                                            --------->AtMYB61                                            <---------ALFIN1                                            --------->DEAR3(1)                                           --------->MYB46(3)                                         --------->ANAC46                                         <---------ALFIN1                                  <-----------ARR10                                 <---------At4g35610                                 --------->At4g35610                                 <------NtERF2                                 --------->ATERF1(1)                                <---------RRTF1(1)                                <---------ERF1                                <<<<<<<<<AtERF-7                                ------>NtERF2                                <<<<<<<<<AtERF-5                                <---------ATERF1(1)                                <---------RAP2.3(1)                                <<<<<<<<<AtERF-2                   --------->ZAT14                                <<<<<<<<<AtERF-4                   <---------ZAT14                                <<<<<<<<<AtERF-3                   <---------ZAT18                                <<<<<<<<<AtERF-1              ------>MYB46(1)                               <---------ANAC46               ------>MYB83                               <---------DEAR3(1)            <---------ALFIN1                               <---------ANAC58             --------->MYB46(3)         <----------ID1                               <---------DREB2C(2)          <---------MYB55(2)   --------->SPL7                               <---------RRTF1(2)          --------->ANAC58    <---------SPL7                               <---------ATERF1(2)         --------->ANAC58 --------->MYB52(1)         <---------ICU4        <---------ANAC58            ------>MYB83    ------->GAMYB--------->CCA1(2)         -------->ATHB1        <---------RRTF1(3)          ------>MYB46(1) <---------ALFIN1         <         --------->YAB1        <---------RAP2.3(2)        --------->ANAC46 ------------------>SPL14--        <---------ATHB12       <---------RAP2.6(2)       --------->AtMYB61--------->MYB46(3)---------        <---------ATHB51       <---------RAP2.3(3)       <---------ALFIN1-------->P---------->DOF2 --        --------->ICU4        --------->RAP2.6(3)       --------->MYB46(3)<---------MYB55(2)---------   actttcttcaattattctattcatcttctcatggcggctctctccaccaccttctactaccacccactctgcactaaccaccgtacaaagagacaagcct  19323800  Previous    Next  AGI:  At3g52060.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G22070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66030.1); contains InterPro domain Protein of unknown function DUF266, plant (InterPro:IPR004949) Range:  from: 19321510    to: 19323264    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52072.1    Description:  other RNA Range:  from: 19323662    to: 19325555    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52070.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO40812.1) Range:  from: 19323696    to: 19324202    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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