Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                             <---------AtLEC2                     <--                                                         <---------ANAC46                  <---------ARR11(3)                                                         <---------ANAC58                 --------->YAB1                                                         <---------ANAC58           <----------DOF2 -                                                     <---------ARR14(2)           <---------At4g35610                                                     --------->ARR14(2)           --------->At4g35610                                      ---------->ID1<------NtERF2    <---------TOE1(3)   <---------YAB1                                     <-------GAMYB<---------ANAC46  <-----------RAV1(2)--------->YAB1                                    <---------MYB46(3)<---------GLK1(1)        <-------TEIL--------->ARR11(3)         <<<<<<<<<<<<<<<<<LFY       --------->MYB52(2)--------->GLK1(1)       --------->GLK1(2)   --- ---------->DOF2         ---------->DOF2         <---------LBD16   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   tacaaaagttgaaacactggaaacaaaaaaagaagggtttgttgtctatttggcggatttcttggatggctcaggttgagattcagctttgatgatattg  19315400                                                                                          <---------MYB55(2)                                                                                          <---------ATHB12                                                                                          --------->MYB46(3)                                                                                         -------->P                                                                                         ------>MYB46(1)                                                                                         ------>MYB83                                                                                        --------->MYB55(1)                                                                                       <---------MYB55(2)                                                                                       <---------MYB111(1)                                                                                       --------->DEAR3(1)                                                                                       --------->MYB46(3)                                                                                       <---------MYB111(2)                               <---------ANAC58                              <---------ALFIN1 <------           <----------DOF2     <---------ANAC46                    --------->At4g35610 --------->AtMYB61    <---------ALFIN1           <---------ANAC58               <---------ANAC46 --------->ANAC58   --------->MYB46(3)        <XXXXXXXXXXXXXXXXXXXXMIR161.2    <---------ANAC58 --------->ANAC46 -------->WRKY12          --------->MYB52(2)                  <---------ANAC58 --------->ANAC58 -------->WRKY38(1)  <-------TEIL                             <---------ANAC55(2)--------->ANAC46 -------At4g35610 --------->ZAT2<----------DOF2        <---------YAB1   ------>ZmHOX2a(1)--------->ANAC58 -------->WRKY45  --------->At4g35610           <---------ATHB12   <---------At4g35610 <---------MYB46(2) ------>At4g35610--------->ANAC46       --------->ATHB12  ------->TEIL----------->RAV1(2)--------->ANAC58   agttgaccaccttctttacaagctgcattagttgctttcacttcattgcaatggtttatgaatttcgtaagctcctgctccacacaacaccaaccaataa  19315500                <---------ATHB12           <------ZmHOX2a(2)           --------->CCA1(2)          <---------ARR14(2)                                                               <---------MYB46(3)          --------->AGP1                                                               <-----------RAV1(1)          --------->ARR14(2)                                                         <----------DOF2          <---------ARR11(3)                                                         ----------------      ---------->DOF2 --------->YAB1                                               <---------YAB1     --------->AHL20(2)                                      <------ZmHOX2a(2) <-----------TGA1 <----     <---------AHL20(2)                                --------->MYB52(1)  <----------DOF2 <------MYB46(1) ---ATHB12--------->ARR11(3)                          <-----------GT1  <---------CCA1(2)   <------MYB83   ctcacaattaaagatccaatcgattcagaatttagggagattgaagaatatagaaattacccgatcagtgtccatctctttcgtcatctttgttggtttc  19315600                        ----------->GT1                        <---------YAB1                                                     <---------ANAC58          <---------LBD16                                                              <----------DOF2          --------->LBD16                                                   --------->DAG2 <---------ANAC46         ----------->RAV1(2)           --------->GLK1(1)        <---------ZAT14     --------->ARR11(3)         <---------ANAC46----------->GT1  --------->YAB1     <---------ANAC46----------->GT1       <- ----->WRI1--------->HSFB2a(2) --------->GLK1(2)         <---------GLK1(1) ---------->DOF2 <---------ANAC58 -------GT1--------->LBD16  --------->AHL20(2)    ---------->DOF2 ----------->GT1   <---------ARR11(3)   acatttctcttccctggaacaagaagatgataaaatctgagaaatcaaaatcgaaagggatttgtgtgaagtaaaaaaaaagtgaatacctttgcgagtt  19315700                                                                                     ------>ZmHOX2a(2)                                                                        <-----------HVH21                                                            <---------WOX13(1)     <---------ARR14(2)                                                          --------->ATHB12    <----------DOF2     <---------GLK1(1)                      <---------MYB52(1)          <-----------TGA1    <---------ARR14(2)                     <-------GAMYB --------->ICU4--------->ANAC46         <----    --------->ARR14(2)               ------>ZmHOX2a(1) <---------At4g35610  <---------YAB1      ----- --------AtLEC2       <------ZmHOX2a(1)   <-----------RAV1(1)   <----------DOF2    --------->ARR14(2)   tgaatggatttgccatggcgattaggagcaatagtcttcctcttctgttggcccttgaactgattgctcttctgcgtcatctttggatcgtcgtttctag  19315800                                                                     ----------->TBP                                                           --------->YAB1                                                          <---------ATHB12                                                        --------->WOX13(1)                                                       --------->MYB46(3)                      ------                                         >>>>>>>>>TBF1------------>CBF                         <-----                             ---------->ID1 <xxxxxxxxxxxxxxxxsmallRNA(i)                     <------- -----STY1(2) <-----------HVH21        *TSS >>>>>>>>>TBF1 <<<<<<<<<ARR2<---------AHL20(2) <---------MYB52(1) ---->STY1(2)<-----------RAV1(1)<---------YAB1 >>>>>>>>>TBF1 ---------->DOF2             <----------DOF2   ctagggttttctcttctgtcgaagggtttttgttgtaatagaagaagaagaagaacaacaatcaaaagcctatataatgggctcttaaggcctttattta  19315900            <---------ICU4                                                                      -----            -------->ATHB1                                                           <------ZmHOX2a(1)            --------->ATHB12                                                      --------->LBD16            --------->ATHB51                                                      <---------LBD16            -------->HAHB4                                              --------->ARR14(3)      -----            <---------AHL20(2)                                          <---------ARR14(3)     ------           <---------YAB1                                               <---------GLK1(2)      <-----           <---------ATHB51                                             --------->ARR11(3)     <-----           --------->ICU4                                               <---------ARR11(3)  ---------        <---------AHL20(2)                                              <---------ARR14(2)  <--------       <---------WOX13(1)                                              *TSS      <---------TOE1(1)--- --->AHL20(2)       ------------>CBF                             <------NtERF2   <---------ANAC46 --- ----AHL20(2)<------------CBF                    --------->At4g35610  ----------->ARR10     --------- ----TBP--------->AHL20(2)                       <---------At4g35610<---------At4g35610    <---------LBD16   tatgggctgattaattattgggcccaatttggagttttctaaattcaactctgctaaatttttgggaggcagaagattttgttccgaggaagacacggat  19316000                                                                      --------->YAB1    --------->DAG2                                                 <----------DOF2   ---------->DOF2                                               <-------TEIL ---->GLK1(1)                                                 --------->HSFC1(2) ---->CCA1(2)                                                 <------MYB83 --->ARR14(2)        ------>ZmHOX2a(1)                        --------->HSFB2a(1) ----GLK1(2)      ------>ZmHOX2a(1)                           <---------HSFB2a(1) ----ARR14(2) --------->ARR11(3)                              <---------HSFC1(2)                 <--- >ANAC58 --------->At5g28300                      --------------->AGL15                    <--------- -ANAC55(2) ----------->ARR10            <-----------GT1 --------->HSFB2a(2)              <---------ANAC58 ------>ANAC58--------->ARR14(2)   ----------->GT1<---------------AGL15   <---------ARR11(3)     ---- ------>ANAC58<---------ARR14(2)  ------>ZmHOX2a(1)      <---------HSFB2a(2)              <---------ANAC58 >ANAC58----------->GT1     ---------->ID1    <----------DOF2 <------MYB46(1) ------>ZmHOX2a(1)  <---   acgcagaaagcggtaaaatcctccttcttcgtcgtccttgtaaaaaccctttctcatttttggaaggttctttcaaaatcctttcttcgattgctttcgg  19316100                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  >>>                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                               <-----------GT1                    ---                                                          ----------->GT1                         <--                                                         <---------TOE2(3)                        ---                                                     <---------At4g35610                         <---                                                     --------->At4g35610                       ------                                                     --------->LBD16                     ============ ------ARR14(2)                                   ------>ZmHOX2a(1)                --------------->AtSPL3 -DOF2   <----------DOF2       <-------TEIL   <---------ARR14(2)                ----------->HVH21---- ----->ARR14(2)            <---------YAB1     --------->ARR14(2)              <---------ICU4   ------ ------GLK1(2)   <----------DOF2    --------->At5g28300  <---------TOE1(3)<<<<<<<<<TBF1  <----------DOF2   attctcgctcgcttcttcgatttttggttttgattcatggtgaatgtgtttcctccgctaaggttaaacgctcttcttcttcatgacagtactttcagtg  19316200   ----------->TGA1   ----------->HVH21 -------->TGA2(2) --------RAP2.6(3) ----------TGA1 -------bZIP60(2) -------ANAC46 ------>ANAC58 ------>bZIP60(2) ------>ANAC55(2) -------ANAC55(2) ------>ANAC58 ------>O2 >>>>>>>HY5 ------>TGA1a -------bZIP60(1) -------O2 -------TGA2(1) ------>bZIP60(1)                                         ------>ZmHOX2a(1) -------TGA1a                                             <---------LBD16 ------>TGA2(1)                              --------->GLK1(2) --------STF1                               <---------ARR14(2) ----->TGA1  --------->At4g35610            --------->ARR14(2) =======bZIP_DOF    --------->YAB1          <---------GLK1(2)   <---------ZAT6        --------->ARR14(2) ------->STF1<---------At4g35610           <------ZmHOX2a(1)    --------->ALFIN1      <---------ARR14(2) ----->HVH21------->TEIL       <---------MYB52(1)         <---------HSFB2a(2)      --------->YAB1  <-   acgtcatgacgctgcatctgtatcatcactcccgttttctatggaggaatctctgttttcctcggagtgttggaaacttgtgtaatcggaactgttctct  19316300  Previous    Next  AGI:  At3g52040.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO40759.1) Range:  from: 19315148    to: 19315839    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g52050.1    Description:  5'-3' exonuclease family protein. similar to 5'-3' exonuclease family protein [Arabidopsis thaliana] (TAIR:AT1G34380.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46274.1); contains InterPro domain Helix-hairpin-helix motif, class 2; (InterPro:IPR008918); contains InterPro domain 5' (InterPro:IPR002421) Range:  from: 19315971    to: 19320552    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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