Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                                                                                        <----------DOF2            ------>ZmHOX2a(1)                                                          --------->TOE2(3)       <---------ZAT2                                                                ------->TEIL       <---------At4g35610                           --------->YAB1                  --------->SPL7       --------->ZAT2                               <---------ATHB12                 <---------ARR11(1)       --------->At4g35610                        --------->WOX13(1)                <---------CCA1(2)     <---------ALFIN1                  --------->LBD16                             <---------SPL7     --------->MYB46(3)          ------->TEIL  --------->ANAC58                   <---------ANAC58  -  --------->ANAC46          --------->YAB1     --------->ANAC58                   <---------ANAC58 <- -----GLK1(2)            <----------DOF2     ---------->DOF2                ---------->DOF2  -------- --->At4g35610       --------->ZAT18  --------->HSFB2a(2)   <---------AHL20(2)   --------------->AtSPL3 ----At4g35610       <---------ZAT18  <---------HSFB2a(2)   --------->AHL20(2)   --------------->AtSPL8   ttctccaccagctcctatataagagcactttcatgaacttccagagacaaagcaatcagaaattaaaaaccaaaatcacaaagtccgtacctttaactct  19298100                                                                                 ------>MYB46(1)                                                                                 ------>MYB83                                                                                 --------->MYB52(1)                                                                                ----------->HVH21                                                                            --------->ZAT18                                                                           ----------->HVH21                                                                        --------->LBD16                                                                      ------>ZmHOX2a(2)   --------->GLK1(1)                                                                     <------ZmHOX2a(2)    <---------GLK1(1)                                                                    --------->ARR14(2)    --------->CCA1(2)                                                                    <---------ARR14(2)   <---------ARR14(2)         <---------HSFB2a(2)                                        <---------ARR11(3)   --------->ARR14(2) <-----------GT1                                --------->At4g35610<------ZmHOX2a(1)     <---------ARR11(3) -----YAB1                 <---------ARR11(3)<---------At4g35610 <---------TOE2(2)       --------->ARR11(3) ---------->HVH21          --------->ARR11(3)--------->At4g35610 <---------TOE1(2)  ------->GAMYB --------WOX13(1)    ---------->DOF2     <----------DOF2    <-----------HVH21  <---------MYB59 ------ ->ZAT6  --------->HSFB2a(2)          ------->TEIL         <-----------RAV1(1) <---------MYB46(2)   aattgacgcttctgtaactcatccaaagacatcttctctgcatctttagctgcttccttcaatgtcgcaggatccgagtgacctaaccgaagatatccaa  19298200          =========================HOX2a_HOX2a          ================================HOX2a_HOX2a          ------>ZmHOX2a(2)         =================================HOX2a_HOX2a         <------ZmHOX2a(2)         ==========================HOX2a_HOX2a        --------->ARR14(2)        <---------ARR14(2)        --------->ARR11(3)                                                                         --        <---------AGP1                                                                       <-------        <---------ARR11(3)                  ---------->DOF2         <---------ZAT6           --------        --------->AGP1              --------->ZAT18     --------->ANAC55(2)     <---------ATHB12  ---       <---------CCA1(2)           <------ZmHOX2a(1)  <-----------GT1  <-----------GT1       -------- ----->RAV1(1)              <------ZmHOX2a(1) ----------->GT1  >>>>>>>>>>>>>>>>>LFY<---------ANAC55(2)   catagaatcagatctaaatgaaattagtgaggaagaaggacactgagaaagaaaatttacctattgcccagtgtaacatcccatcaagtgaagagaatcc  19298300                                     <---------HSFB2a(1)                                     --------->HSFB2a(1)                                     <---------HSFC1(2)                                     --------->HSFC1(2)                                    <---------ARR14(2)                                    --------->GLK1(2)                                    --------->ARR14(2)                                      <--------                                   <---------GLK1(2)                                        ---------                                 --------->LBD16                                       --------->LBD16                               <---------LBD16                                        --------->ANAC58                              --------->MYB52(1)                                      <---------HSFB2a(2)                             --------->ANAC46                                         --------->ANAC58         <---------ARR11(3)  <---------ALFIN1                                         --------->LBD16         --------->ARR11(3) <---------ZAT14                                           --------->ANAC46 ------->AtMYB61           <---------ALFIN1                                           --------->HSFB2a(2) --ARR14(2)                --------->AtMYB61                     --------->ZAT6      <---------LBD16 ->ARR14(2)               --------->ANAC46              --------->REM1(1)            --------->LBD16 ------>MYB46(3)       <------ZmHOX2a(2)              <----------DOF2               <---------LBD16 ->GLK1(2) ------>ZmHOX2a(2)--------->ZAT14      --------->RAP2.6(3)          --------->AtMYB61    <-   accatcgatttgatcttgctctccgatcaccacaccggaatcttctaccaattcggcttcatctctaacactagaccagaccattcccccggaagagtta  19298400                                                                                                 <---                                                                                             <------NtERF2                                                                                            <--------                               <------ZmHOX2a(2)                                            <--------                              --------->ARR11(3)                                           <---------DEAR3(1)                       --------->AtMYB61                                                 ------>NtERF2                      --------->MYB46(3)                                                --------->ANAC46                     ------>MYB83 --------->MYB46(3)                                    <---------LBD16                     ------>MYB46(1)                         ----------->GT1           <---------HSFB2a(2)                    --------->ANAC46                  ----------->GT1    <------NtERF2 <---------LBD16      --------->At4g35610     <---------ARR11(3)    <---------ARR14(2)  <---------DEAR3(2)<------NtERF2 -ZAT6<---------At4g35610 <---------ATHB12          --------->ARR14(2)  ------>NtERF2  --------->HSFB2a(2) -->GT1   <------ZmHOX2a(2)--------->YAB1           --------->MYB52(1) <---------DEAR3(1)--------->LBD16 ---------DOF2     --------->MYB46(3) --------->AtMYB61    ---------->DOF2    <----------DOF2<-------GAMYB   actttctcagcgatcgaaaaacccaccaatgagatcaccaccaatagaaacacatatcggaaaaagaaaatcgtcggcatctttgtcttcccggcggtag  19298500                                                                                 <---------MYB111(1)                                                                               <-----------GT1                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                            ----------->GT1                              *TSS                                        ---------->DOF2     ----------->GT1    <---------DAG2         --------------->AGL15    --------->ANAC46        <----    <---------ICU4      <----------DOF2   <---------DAG2                --------->ANAC58        ----- ------ZAT6          <---------TOE1(3)    <----------DOF2         <---------AHL20(2)   --------->TOE2(3) -DEAR3(2)    <---------TOE2(3)  <---------MYB52(1) <---------TOE2(3)   --------->ANAC58------>ZmHOX2a(1) -MYB46(3)  ---------->DOF2 <-----------GT1 <-----------GT1       --------->AHL20(2)   --------->TOE1(3)   acttaatcagtaaataaaggtttaagctttttcccgttttgcgactttaccatttatgttttcagaatttatatacgaaagtaactactccttaacaacg  19298600                      <-----------HVH21                     <---------O2                     --------->ANAC55(2)                     --------->TGA1a                     --------->bZIP60(2)                     --------->ANAC55(1)                     --------->O2                     --------->ANAC46                     --------->ANAC58                     --------->ANAC58                 <-----------GT1                <---------YAB1                                              <------NtERF2             --------->AHL20(2)                                           --------->ALFIN1             <---------YAB1                                             <---------ZAT2             <---------AHL20(2)                                         --------->ZAT2          <---------AHL20(2)                                            <---------At4g35610          --------->AHL20(2)                                            --------->At4g35610          <---------AHL20(1)                                            <---------TGA1a          --------->AHL20(1)         <-----------HVH21                  --------->O2  <---------PCF5         --------->YAB1--------->TGA2(2)                                --------->TGA1a      --------->WOX13(1)  <---------At4g35610                  ===================bZIP_DOF       ----    ------------>CBF<-----------STF1 <-----------TGA1          ---------->DOF2 --------->At4g35610---   <---------At4g35610<-----------TGA1                      --------->TOE2(3)  <---------At4g35610--- ---MYC3 --------->AHL20(2)     --------->MYB46(3)<---------ZAT18       <---------O2  <---------PCF2< -->MYC3<---------ATHB12  --------->At4g35610     --------->ZAT18     <-----------RAV1(2)       <----   tgttcagccaattatattattacacgtcatctcatccatcgtcaccttctatcgcgctaaaacattaaagtgccaggtggcagaagcgggaccaattgaa  19298700                  --------->At4g35610                    --------------->AtSPL8             --------->ANAC46                            --------->ZAT6             <---------ANAC55(2)                         --------------->AtSPL3     --------->TOE2(3)                                  <---------YAB1     --------->YAB1                                    <-----------GT1 ----->ICU4<-----------GT1   <---------ANAC46     --------->AHL20(2) ------>ATHB12  <---------WRKY12                 <---------YAB1       <---------GLK1(2) ------>YAB1 --------->ANAC55(2)               --------->YAB1 --------->ANAC58                <------ ---------YAB1 --------->DOF5.7(2)             <--------HAHB4 --------->ANAC58                ------- -----WOX13(1)--------->TOE2(3)----------->GT1<---------YAB1 --------->SPL7                --------->ALFIN1   tgattaatcttatttacgtcaactaaaattagggtgtaaattgaaactattattatttatcagtacgaaatagaatttttaaaaactataagggtggatt  19298800                      --------->AHL20(2)                      <---------AHL20(1)                      --------->AHL20(1)                                                       ------                   <---------ICU4                                                              ======           ---------->DOF2                       <---------ANAC58                              ------         <------ZmHOX2a(1)                       <---------ANAC58                  --------->YAB1       <---------TOE2(3)  --------->YAB1   <---------ALFIN1           <----------DOF2          ------  --------->ICU4   <--------HAHB4 --------->ANAC46                    ===============================  --------->AHL20(2)  <---------AHL20(2)--------->ANAC46              --------->TOE2(3)        ------ ---ARR14(2)      --------->ICU4  --------->ANAC58                  ------->TEIL   <---------ICU4 -->ARR14(2) --------->DAG2       --------->ANAC58      *TSS<---------ATHB12 <-----------GT1   ------   tgaaatatttaggaaaaggcataattaattagaaacacgacccctccacttccttgagtctaatcaaatgtgccttaatttacaaaaatgacttctcacg  19298900                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                             --------                                                                                             ------>NtERF2                                                                                           --------->ATERF1(1)                                                                                           --------->MYB46(3)                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)  --------->ANAC58      <---------DAG2                                                   --------->ARR14(2)  --------->ANAC58   <---------ALFIN1                                                    <---------ARR14(2)  --------->ANAC46  <-------TEIL                                                    <---------ZAT2 --->ANAC46      --------->ANAC58                                                   --------->ZAT2 ===================================bZIP_DOF                                     ---------->DOF2----- --->O2          --------->ANAC58                                             ------>ZmHOX2a(1)------ --->ANAC58      --------->ANAC46                                             ===================HOX2a_HOX2a ====bZIP_DOF  <---------ALFIN1      <----------DOF2                          ====================HOX2a_HOX2a --->TGA1a<-----------GT1<----------DOF2                                    ----------->RAV1(2)------ --->ANAC58 --------->ANAC46   <----------DOF2  <<<<<<<<<TBF1       <XXXXXXXXXXXXXXXXXXXXMIR391------   actcacgccattaaactccacgtacacctttccctttcactttcatcttcttcttccctcgattcaatgggttatctctcctgcaaagctggatccgccg  19299000  Previous    Next  AGI:  At3g51980.1    Description:  binding. similar to armadillo/beta-catenin repeat family protein [Arabidopsis thaliana] (TAIR:AT3G09350.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68743.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 19296550    to: 19298530    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51990.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G28390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40744.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82122.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 19298856    to: 19300308    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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