Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------AtLEC2                                                                                  <----------DOF2           ---------->DOF2    --------->AtLEC2                                  ------>ZmHOX2a(1)        <---------ANAC55(2) <---------AtLEC2              <---------ALFIN1   ------>MYB83        --------->ANAC58   <-------TEIL              --------->ANAC46        ------>MYB46(1)        <        --------->ANAC58--------->At4g35610    <-----------GT1            <---------HSFB2a(1)       -    ------->TEIL      --------->DAG2        <----------DOF2               --------->HSFB2a(1)     <-- <---------YAB1      ---------->DOF2   ---------->DOF2  <---------ALFIN1<---------ARR14(2)       <---   gtgatgaatcaagtaaagcatcaaaaagctgcatgcacagagaaagcttttaccttcgccactctctaagagcgaaaccttcctctttctccatggccga  19261600           <------ZmHOX2a(2)          <---------ARR11(3)     <------NtERF2    ------>NtERF2   <---------DEAR3(1)                             <------NtERF2   <---------ANAC46                              --------->LBD16   <---------RAP2.6(2)                          <---------DEAR3(1)   --------->ATERF1(2)                          <---------ANAC46   <---------ATERF1(2)                         <---------LBD16<---------ANAC46  --------->RAP2.6(3)                          --------->ATERF1(1)                  <------NtERF2  --------->ATERF1(1)                          <------NtERF2  <---------ANAC58      ------>NtERF2  <------NtERF2                               <---------RAP2.3(1)                  --------->DEAR3(1) <---------ERF1                               <---------ATERF1(1)        --------->At4g35610 <---------ATERF1(1)                          ------>NtERF2   <---------ANAC58    --------->RAP2.3(1) ---------DEAR3(1)                           <---------RAP2.3(3)       <------ZmHOX2a(1) -------->ALFIN1                             <---------DEAR3(1)     <---------HSFB2a(2) -------MYB46(3)                             <---------RAP2.3(2) <-----------HVH21<---------LBD16 ------AtMYB61                            --------->ETT(2)   <---------LBD16  ------->TEIL<--------P   tggtggcggcaagatcgaatcgtttgtatcatcgaaactatttatcgacggcggagattgagtttcgggtcgaggagatgaatcgccgcatggtaagtct  19261700                                                                                                 <---                                                                                                <----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------NtERF2                                                                                              -------                                                                                              -------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             ------>NtERF2                                                                                            <--------                                                                                          <---------ATERF1(1)                                                                                 <---------HSFC1(2)             <------MYB83                                                        --------->HSFC1(2)             <------MYB46(1)                              --------->ARR14(2) ----------->HVH21-------           <--------P                             ----------->HVH21        <---------ANAC46 ---------          <-------GAMYB                          ------>NtERF2         --------->SPL7     <----------          <---------MYB52(1)                  --------->At4g35610   --------->ANAC58     --------->ANAC46       <---------LBD16                        <---------At4g35610   --------->ANAC58   ------>ZmHOX2a(1)     <XXXXXXXXXXXXXXXXXXXXMIR832-3P         --------->MYB46(3)--------->LBD16<---------MYB52(1)<-----  <----------DOF2    --------->ICU4  ----------->GT1      <---------ARR14(2)--------->LBD16--------->ATERF1(1)   gactctttctccggttgggagtcaaaattagagaaggaagagtcaaaccgctgcgactggaatccgagactcgtaagccgtgaagtttcctccgtcgccg  19261800 ---NtERF2 -----ATERF1(1) ->NtERF2--------->LBD16 --->ANAC46 --->RRTF1(3) --->RAP2.6(2) --->RRTF1(2) --->DREB2C(2) --->RAP2.3(2) --->ATERF1(2) --->RAP2.3(3) --->DEAR3(1) -->RAP2.3(1) -->ORA47(2) -->ATERF1(1) -->DEAR4(2) -->ERF1 <-----------HVH21 --RAP2.3(1)                                                                <---------ANAC58 --ATERF1(1)                                               <---------bZIP60(1) -DEAR3(1)                                                 --------->ANAC46 <---------ANAC46 -->RRTF1(1)    --------->ATHB12   ----------->HVH21       --------->bZIP60(1)    <---------AHL20(2) >DEAR3(1)  <---------SPL7<---------At5g28300              --------->ETT(2) <---------ANAC58 -HVH21 <---------ANAC46--------->MYB46(3)   <---------MYB52(1)     <----------DOF2   <---------AHL20(2) ----ATERF1(2)<---------TOE1(2)    ------>ZmHOX2a(1)<---------TOE2(3)  --------->MYB52(2)     -------   ccatctacttccgtcgaacgatttgaatcaccgagtcctgactcttcgttgctcaaggttgacgacatctctttagttgtgtgtttattttcttacaaaa  19261900                                                                          <-----------TBP                                                                       <---------ANAC46                                                                      ------>NtERF2                                                                      <------NtERF2                                                                    <---------DEAR3(1)                                                                    --------->ANAC46      <---------At4g35610                                                                   <---------LBD16     <------MYB83                                                                  --------->ANAC46     <------MYB46(1)                                                                 <---------REM1(2)   <--------P                                                               ------>ZmHOX2a(2)    <---------ANAC46                                                              <------ZmHOX2a(2)    <---------MYB46(3)                                                             <-----------ARR10<---------YAB1                                 --------->ANAC55(2)         <---------ARR14(2)    --------->ATHB12                                 <---------ANAC58            --------->ARR14(2)  <---------WOX13(1)                       <---------ALFIN1                      --------->ARR11(3) <------------CBF                      <---------ZAT14                        <---------ARR11(3)--------->ATHB51                    --------->ZAT18   <----------ID1*TSS    <------ZmHOX2a(1) <---------AHL20(2)   <----------DOF2  <---------ZAT18 --------->MYB52(1)    <---------TOE1(2) --------->YAB1--------->At4g35610 --->DOF2    <----------DOF2     <---------ANAC58<<<<<<<<<TBF1<---------GLK1(1)--------->ATHB12   gtcttctttgctctgctttgtgtccacactggttttcgtaacgacgaattcttcttctcttaggatctacgcggcgttttataattggttggagcttaaa  19262000                                                                     <-----------HVH21                                                                  <---------ANAC46                                                                  --------->ANAC55(2)                                                                  <---------ANAC55(2)                                       <---------At4g35610        <---------ANAC55(1)                                      <---------ARR14(2)          <---------TGA1a                                      --------->GLK1(2)           --------->O2                                      --------->ARR14(2)          <---------O2                    <-------TEIL     <---------CCA1(2)            --------->TGA1a                <---------------AtSPL8------->TEIL                <---------ANAC58               --------->DAG2    <---------ANAC58                 <---------ANAC58             ---------->DOF2     ----------->GT1                  ===================================        ----------->GT1          <---------ANAC58          <---------ZAT18      <---------ZAT14          <---------ARR14(2)        <---------SPL7  --------->ICU4      --------->ZAT14         <---------CCA1(2)        --------------->AtSPL8      --------->ZAT18     <---------ANAC46             <---------------AtSPL3 --------->ANAC46----------->GT1 <---------ANAC46   <---------YAB1<---------bZIP60(2)      ----------   tacacgagagcagtgaaaagggtacatcgtgtgtatcgtgaatctgcctctaatctgattgtacgcttacgtgtcatgttttgtattgagcaaaaaagca  19262100                                                       --------->ARR14(2)                                                --------->HSFB2a(1)                                          <---------ANAC46                   --------->ARR14(2)     <---------ANAC58                <---------ANAC58       --------->GLK1(2)                <---------ANAC46      <---------GLK1(2)<---------ARR14(2)                          <-    <---------ANAC46                 <---------At4g35610   ------>ZmHOX2a(1)                      <--   <---------AtMYB61             <-----------HVH21    ------>ZmHOX2a(1)                     <--------  --------->SPL7<---------ANAC58 <-----------TGA1--------->KAN4(2)                       <---------AHL20(2) <---------MYB52(1)<---------ARR14(2)--------->At4g35610 --------->YAB1                  <---------YAB1 =bZIP_DOF   ----------->HVH21  --------->YAB1  <---------KAN4(1)  <----------DOF2 ----------->GT1--- >DOF2   ------->TEIL       <---------YAB1<---------ANAC58 <---------YAB1      ---------->DOF2  <----   tccgtatggtggaccttgacgtatacgattactatcgtcagattccttgaatgttcctatcctgatgggcttttatgaacacaaagggtttataattttt  19262200           --------->CCA1(2)          <---------ARR11(3)          --------->ARR11(3)         <---------LBD16   <----------DOF2            <---------ARR11(3)                                      --------->ATHB12 --------ZAT18      --------->AHL20(2) --------->LBD16                              <----------DOF2 -------RAP2.6(2) --------->ANAC58 --------->ANAC46                           --------->ARR14(2) -YAB1  <---------TOE2(3)     --------->ARR11(3)                              <---------ARR14(2) ------->ID1      --------->ANAC58<---------At5g28300                        ------>MYB46(1) -------RAV1(1)   ----------->GT1<-----------GT1 <---------WOX13(1)          ------>MYB83   gtggccttttaagatatatcaagaaaatataagatttaccccagaaattagattgacaatttttaaaccgaaggaaaccaaatttgcttcattgttcatt  19262300                                    --------->HSFB2a(2)                              <---------ARR11(3)                       --------->RAP2.6(2)                       --------->DEAR3(1)                       --------->DREB2C(2)                      --------->DEAR3(2)                                                 <-----------GT1                      <------------AtMYB77                                        <---------YAB1                      --------->MYB46(3)          --------->YAB1       <-------MYC3   <---------ICU4                     --------->SPL7 <---------HSFB2a(2)                ------->MYC3  --------->ICU4        <------MYB46(1)------->GAMYB--------->TOE2(3)         <---------AHL20(1) --------->TOE2(3)        <------MYB83--------->ARR14(2)         --------->YAB1 --------->AHL20(1)<---------ICU4  <---------MYB52(1)<---------ARR14(2)   --------->ZAT6       --------->ARR11(3)--------->YAB1   aaccggtatttggtctaattccgaaccgccaatttcttccataacactacaataagagtgcatatatattgcatatggctcatcatcaatattacaaaat  19262400                                                                      --------->MYB52(1)                                                                      ---------->DOF2                 <---------TOE2(3)                           --------->At4g35610              <---------AHL20(2)                         ----------->RAV1(1)          --------->AHL20(2)                            --------->ANAC58                        <----          <---------AHL20(2)    ----------->GT1         --------->ANAC58                    ---------   gagtttcagtttttaatttaagtttacatcggattagttaataacgagtagtcacagaacgacagcaaaaaataaaggaactatacgttgttccaaggct  19262500  Previous    Next  AGI:  At3g51890.1    Description:  protein binding / protein transporter/ structural molecule. similar to protein binding / protein transporter/ structural molecule [Arabidopsis thaliana] (TAIR:AT2G40060.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69697.1); contains InterPro domain Clathrin light chain; (InterPro:IPR000996) Range:  from: 19260457    to: 19261952    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51895.1    Description:  SULTR3;1 (SULFATE TRANSPORTER 1); sulfate transmembrane transporter. Identical to Sulfate transporter 3.1 (SULTR3;1) [Arabidopsis Thaliana] (GB:Q9SV13;GB:O23250;GB:O64435;GB:O65025); similar to SULTR3,4, sulfate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G15990.1); similar to SULTR3,2 (SULFATE TRANSPORTER 3,2), sulfate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT4G02700.1); similar to AST91 (SULFATE TRANSPORTER 91), sulfate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G23090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22568.1); similar to unnamed protein product [Vitis vinifera] (GB Range:  from: 19262265    to: 19266738    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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