Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->YAB1                <---------ATHB12               ------>MYB83                                                                   <------               ------>MYB46(1)                                                                <------          --------->GLK1(1)                                                              --------->At5g28300         <---------ARR14(2)                                                            <------------AtMYB77         --------->ARR14(2)                                                            --------->ZAT6 --------->ARR14(2)            <---------ICU4                                        --------->MYB52(1) <---------ARR14(2)---------->DOF2                     <-----------GT1             <---------MYB59 ---->MYB52(1)--------->WOX13(1)                <----------DOF2                 --------->AHL20(2) <-   acggatagtcggataccaatcaaaagtgttcaattctgactcttgaaaaactttatttatcttcattttgaattgaatacaattatctaactgtaacttt  19250000                                                                                             --------                                                                                             --------                                                 ------->GAMYB          ------>ZmHOX2a(1)   ------->TEIL                                                <---------MYB46(2)     --------->TOE2(3)    ---------                                     --------->HSFC1(1)              ------>MYB83        --------->ANAC58                                     <---------HSFC1(1)              ------>MYB46(1)     --------->ANAC58                                     --------->HSFB2a(2)           <---------MYB59      --------->SPL7                                     <---------HSFB2a(2)          --------->HSFB2a(1)   <---------TOE1(2)       --------->ANAC46          <----------DOF2<---------MYB52(2)<---------HSFC1(2)  --------->TOE1(2) ----DOF2                      --------------->AGL15              --------->HSFC1(2)<---------------AtSPL3 ---DAG2   --------->WOX13(1)  <---------------AGL15              <---------HSFB2a(1) <---------SPL7 ----------GT1              <-----------GT1--------->GLK1(2) --------------->AtSPL8 --------------->AtSPL3   ttttcttactcgtcaatctatagaatcaagttaccctttctagagaatcaactaactagtagtctagtaccttcctcaatacaatagtcgtacgaacgcc  19250100                                                                                               <-----                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                           <------ZmHOX2a(1)                           <---------ANAC46                                   --------------->AGL15                           <---------ANAC58                                   <---------------AGL15 ->ANAC58                  <---------ANAC58                                  <-----------------AGL2 ->ANAC58    --------->ANAC46                                                ----------------->AGL3 >SPL7--------------->AtSPL8                                                 ----------------->AGL2   catttatctaggtaccctcaaattttgtgtcgtctcacttattagttatctattactagttgattactcaatacaaatttccctaaatagagaggatatg  19250200                     ------>MYB46(1)                   <---------MYB59                                     --------->ATHB51    <---------ANAC58 -------->P                            ------>MYB46(1)    <---------ANAC55(2)                                    ------>MYB83<---------AHL20(2)    <---------ANAC46 ------>MYB83                          -------->P  --------->AHL20(2)    <---------ANAC55(1)                                  --------->TOE2(2)    --------->ANAC55(2)                                  --------->TOE1(2)    <---------ANAC58--------->MYB55(1)          --------->ANAC58       <---------ICU4   <-----------------------TaNAC69(2)           --------->ANAC58      <---------AHL20(2) ----YAB1          <---------MYB111(1)        ---------->DOF2         --------->ICU4 ->CCA1(2)         --------->TOE1(2)       >>>>>>>>>>MYB80--------->MYB55(1)                      --- --GLK1(1)         --------->TOE2(2)  <-----------HVH21  <---------MYB111(1)               <--------- -ARR14(2)<---------AHL20(2)          --------->TOE2(3)  <---------MYB59    --------->TOE2(3)    ---- >ARR14(2)--------->AHL20(2)  <---------YAB1 --------->AtMYB61 ---------->DOF2       ----------->GT1-   agagttgcgtatttaaacaaacctaccaaaatatgattttcgtcaaaccaaagcaaaaacctaccaaaagaaattatttcttaaatacagaaaaaaacaa  19250300                   <---------ANAC58                   <---------ANAC46                   <---------ANAC58                  <-------TEIL               --------->HSFB2a(1)               <---------HSFC1(2)               --------->ZAT2               <---------At4g35610               --------->At4g35610          <---------HSFB2a(2)          --------->LBD16          --------->HSFB2a(2)         <---------LBD16                                                 ----------->TBP         --------->HSFB2a(2)                                        ------>NtERF2         <---------ANAC46                                          --------->DEAR3(1)    --------->ANAC58         <---------HSFB2a(2)                                       <---------ALFIN1      --------->bZIP60(1)        <---------LBD16                --------->TOE2(3)          <------NtERF2          --------->ANAC46    --------->HSFC1(2)              ----------->RAV1(1)           --------->ATERF1(1)    --------->ANAC58    --------->HSFB2a(1)             ------>MYB46(1)       <---------ANAC55(2)          --------->MYB52(1)    <---------HSFC1(2)<-------TEIL  ------>MYB83          --------->ANAC46            ----------->HVH21    <---------HSFB2a(1)           --------->MYB46(3)      --------->ANAC58            ----------->TGA1 ------>DAG2   --------->HSFC1(2)--------->ANAC58         --------->ANAC58   ----------->TBP--------- -ID1  --------->MYB52(1)        --------->ANAC58         --------->ANAC55(2)<---------AHL20(2)   --- ------>DOF2   <---------HSFB2a(1)<---------MYB59------------>CBF<---------ATERF1(1)----------->RAV1(2) ---------->GT1<---------ZAT2   ------->TEIL --------->AtMYB61  --------->ANAC46    =================   aaaggaaacttccgggaagctgcgtacatagatggacccaacataaaccaaaacaataacacgtagtcgccacctatatataaaaaacctgacgcaacac  19250400                                                                                     <-----------HVH21                                                                                    <---------O2                                                                                    --------->TGA1a                                                                                    --------->O2                                                                              --------->ANAC46                                                                            ==================bZIP_DOF                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                        --------->ANAC58                                                                      --------->MYB52(1)                                                                   ------>NtERF2    <---------TGA1a                                            --------->ALFIN1       --------->HSFB2a(2)----------->HVH21                                          <---------ANAC46        --------->DEAR3(1)--------->ANAC55(2)                                          <---------ANAC58     ===============================MYC_MYB    <---------REM1(1)                     <---------ANAC58     ------->GAMYB---------->DOF2     -----    *TSS                              --------->HSFC1(2)      --------->MYB46(3)    ================= -->RAV1(1)                           <---------HSFC1(2)  <---------At4g35610 --------->ANAC58------- ------>MYB52(1)               --------->TOE2(2)          --------->At4g35610 --------->ANAC58======= ===RAV        --------->YAB1  --------->TOE1(2)          <------NtERF2 --------->ANAC58   --------->LBD16   aaacagatgtagtagaatcaaaacgtcttaaaacatgggaagtatcgtggagccatgggcagcaatcgccgagaacggaaacgcaaacgtgaccgcgaaa  19250500                  <---------O2                                                                  -----                ----------->RAV1(1)                                                             -----           --------->At4g35610     --------->ANAC46                                      --------->HSFB2a(1)           <---------ZAT2        --------->ANAC46                                        --------->HSFC1(2)    --------->ZAT2--------->O2   --------->ANAC58                                        <---------HSFC1(2)    <---------ZAT2<---------TGA1a--------->ANAC58                       --------->TOE1(2)<---------HSFB2a(1) ---->DAG2 <---------At4g35610  <---------ZAT18                 <---------GLK1(1)      ---------->DOF2 ====bZIP_DOF  ----------->HVH21--------->ZAT14            <------ZmHOX2a(1)    <------MYB83    ----- --->DOF2  --------->ZAT2     --------->At4g35610        <---------TOE1(3)      <---------MYB46(3) ===========================bZIP_DOF                     <---------TOE2(3)      <------MYB46(1) -----   ggctcgagcagggagctgcgacatgggagaacagcacacaacatgtcttcatcgtcgctaaggaagaaatcagacctgagattggttcagaaagttccat  19250600              --------->KAN4(2)             --------->KAN4(1)                                                    --------->ANAC46             --------->HSFB2a(1)                                                  --------->ANAC58             <---------HSFB2a(1)                                      --------->ANAC46 ---->ANAC58 --------->HSFC1(2)        --------->ICU4                 --------->ANAC58   <---------ANAC58 ---->AtLEC2 <---------HSFC1(2)        <---------YAB1                 --------->ANAC58   <---------ANAC58 ---->ANAC46 <---------KAN4(1)<---------HSFB2a(2)   <---------At4g35610           --------->ANAC58 ---->ANAC58<---------KAN4(2) --------->HSFB2a(2)   --------->At4g35610  --------->DEAR3(1)       <--   gcaaaactctcaagaacattctctctaatcttcaagaagtcattcttggtactaagcttactctcttatttctcgccatccctctcgccattcttgccaa  19250700                                                                            <------MYB83                                                                            <------MYB46(1)                                                                           --------->MYB111(2)                                                                           --------->MYB111(1)                                                                           <---------AtMYB61                                                                           --------->MYB46(2)                                                                           --------->MYB59                                                                           <---------MYB46(3)                                                                  <---------MYB46(3)                                                                  <------MYB46(1)                       --------->ARR11(3)                         <------MYB83 ----------->GT1             <---------ANAC58                                    <---------AtMYB61            -------             <---------ANAC46                           <---------YAB1<---------AtMYB61 --------->MYB59 -------ICU4 <---------ANAC58               <----------DOF2   <-----------RAV1(1)<---------ZAT6   ttcttacaactacggtcgtgtaagttatcttctcaattccttctctctttctctaattttgtttgtgttggtgaggtttggtagtgaaattaggcaattc  19250800                                                           --------->MYB46(3)                                                           <---------ATHB12                                                          ------>MYB46(1)                                                          --------->ANAC58                                                          -------->P                                                          ------>MYB83             <---------ICU4             <---------YAB1                               --------->ANAC58       --------->AHL20(1)           <---------ICU4                            <-----------GT1            --------->YAB1          ------>ZmHOX2a(1)                        --------->GLK1(1)          --------->AHL20(2)      <---------ZAT18                              --------->HSFB2a(1)        <---------AHL20(2)   <---------ANAC58                                <---------GLK1(1)      <---------AHL20(2)   <---------ANAC58                               ------->TEIL            --------->AHL20(2) --------->ZAT14           <------ZmHOX2a(1) --------->CCA1(2)      <---------TOE2(3)          <----- <---------ZAT14     <----------DOF2        --------->ARR14(2)   <---------AHL20(2)--------->YAB1 -->ICU4  --------->ICU4 <---------TOE2(3)  <---------ARR14(2)  --------->AHL20(2)--------->ICU4 <---   ttgttcagtgtccttatgacttccttttaggattttagttgaaggggatacgaatttcccaaccaattttatggatttaaaaaaataatgaagacaactt  19250900  Previous    Next  AGI:  At3g51860.1    Description:  CAX3 (cation exchanger 3); cation:cation antiporter. Identical to Vacuolar cation/proton exchanger 3 (CAX3) [Arabidopsis Thaliana] (GB:Q93Z81;GB:O65022;GB:Q0WUY4;GB:Q9LKW8); similar to CAX1 (CATION EXCHANGER 1), calcium ion transmembrane transporter/ calcium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT2G38170.1); similar to cax51 [Capsella bursa-pastoris] (GB:AAT70233.1); contains InterPro domain Calcium/proton exchanger superfamily (InterPro:IPR004798); contains InterPro domain Calcium/proton exchanger; (InterPro:IPR004713); contains InterPro domain Sodium/calcium exchanger membrane region; (InterPro:IPR004837) Range:  from: 19250404    to: 19253890    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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