Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------RVE1(1)                                                                                <---------CCA1(1)                     <---------------AtSPL8                                    <---------ARR11(3)                     <---------------AtSPL3                               ------>ZmHOX2a(2)                     --------------->AtSPL8                             <---------AGP1                <---------AHL20(2)                                      --------->ARR11(3)        --------->ATHB51                                                --------->ARR14(2)        <---------AHL20(2)        <-----------GT1                       <---------ARR14(2)        --------->AHL20(2)        --------->YAB1       --------->YAB1   <---------ARR11(3)        --------->ATHB12     <-------TEIL   <---------YAB1             <---------CCA1(2)       <---------AHL20(2)------->TEIL      <---------AHL20(2)<---------MYB46(3)--------->ARR11(3)    <---------AHL20(2)   --------------->AtSPL8       <---------YAB1 --------->ALFIN1         <------    --------->AHL20(2)   --------------->AtSPL3  --------->ATHB12<-----------RAV1(2)         --------   aaccaaaaaattatttgttttattttgtacgtacaattaccatatttttattcattgtcatagttgttcaggtggatcttagatatttcaaagtataaaa  19243000                                                                             <---------AHL20(1)                                                                             <---------AHL20(2)                                                                           <---------AHL20(2)                                                                           <---------YAB1                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                                                                        <---------AHL20(2)                                                    <---------ICU4----------->GT1     --------->LBD16                 <---------ICU4                   <---------AHL20(1)    --------->AHL20(2)       ----     ------>ZmHOX2a(2)                        --------->ANAC46   <---------TOE2(3)  <---------LBD16 <---------YAB1  --------->ATHB12            ------->TEIL      ---------->DOF2<---------YAB1   ------ ---AHL20(2)    <---------YAB1             <---------ZAT18    --------->AHL20(2)   <---------At5g28300 ->AHL20(2)   <---------At4g35610    --------->ANAC55(2)      <---------AHL20(2)  <-----------GT1<---   tttgtgatcgtattttagatgattacacacatatcacatatgtaatgcacataatatttccaaattaaaggtaaaatattatttttaccggagtatgtat  19243100                                <---------AHL20(2)                                   --------->YAB1                              <---------RVE1(1)                                     <---------ATHB12                             <---------ARR11(3)                            <---------MYB46(3)              <---------YAB1 --------->ARR11(3)                         <-----------RAV1(1) ----->ARR11(3)       <---------AHL20(2)  --------->YAB1                <---------ZAT6          ----- ->TEIL   <---------GLK1(2)  <---------GLK1(2)                      --------->ARR11(3)  <---------ICU4 ------ARR11(3)       --------->AHL20(2)<---------WOX13(1)      ---------->DOF2   --------->WOX13(1)   atattcaatccagattatttttaaaaaattagattttttttgaatgatcagtcttatcaagaattcaaaagatagtgttgttgtcaatcaaaattactaa  19243200                                       --------->ARR11(3)                                       <---------ARR11(3)                                       --------->AHL20(1)                                      <---------AHL20(2)                                   <---------ICU4                             --------->TOE2(3)                             --------->TOE1(3)                           ------->TEIL<---------AHL20(1)                        --------->ANAC55(2)                        <---------ANAC55(2)                        --------->ANAC46  <<<<<<<<<<GT-3b                                 --------->DAG2                       --------------->AtSPL3                                  <---------AHL20(2)                       <---------------AtSPL3      --------->GLK1(2)      --------->AHL20(2) --------                       <-------TEIL<---------AHL20(2)           <-----------GT1--------->AHL20(2)                       --------------->AtSPL8     <---------GLK1(2)    ----------->GT1   ---------->DOF2 ----->DOF2  <---------WRKY38(1)  --------->AHL20(2)   ---------->DOF2----------->GT1   <---------ATHB12   aagaaaattgtttagtcaacatatatacgtaccttaataaatatttttcttagaatctaaaggaatttacagatgttaaaataaaatccaataaagtgta  19243300                                                              <---------WOX13(1)                                                           --------->ICU4                                                           <---------YAB1                                                         <---------ICU4             ---------->DOF2                             --------->YAB1          --------->ANAC58                              <---------ATHB51      ------>MYB83                                      --------->ICU4      ------>MYB46(1)                      --------->TOE2(2) <------------CBF                      <-    <---------MYB59                        --------->TOE1(2)--------->ATHB12                       --    <---------MYB46(2)              ------------------------>ANAC81             ----------->GT1 <----   ----------------->AGL1          ---------->DOF2    ------>MYB46(1)    --------------->AGL15 <----- <-----------GT1               <----------ID1         ------>MYB83       <---------------AGL15 ------ --->GT1  --------->ANAC58   ---------->DOF2        <---------MYB59   <-----------GT1  ---------->DOF2   aatttaccaaacaagtaaagaccatttttcaaaaagaaaaagaaaccaaggagaccaaattatgattgagttttacaaaatacagaaaataaagaaatta  19243400                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                        --------->SPL7 --------AHL20(2)                                                     <---------SPL7 ------->AHL20(2)                                                 <-----------GT1 -----AHL20(2)                                                 <---------ICU4           --------->ANAC46 ----AHL20(2)                                      --------->ANAC58 --------------->AtSPL8 --->AHL20(2)   ---------->DOF2             *TSS   --------->ANAC58 --------------->AtSPL3   aataaatatcaaaaactcaaaagagacctctcttctctctctctctctctctctcgctactctcatcttcaccgtacgcttcttcgatctacgcttctct  19243500                                                                                     <----------DOF2                                                                             ------>ZmHOX2a(2)                                                                            <------ZmHOX2a(2)                                                                           --------->ARR11(3)                                                                           <---------ARR11(3)                                                                           >>>>>>>>>GATA-1                                                                           >>>>>>>>>GATA-3                          ------>ZmHOX2a(1)                                >>>>>>>>>GATA-2                      --------->ARR14(2)                  --------->TOE1(3)>>>>>>>>>GATA-4                   <---------YAB1                         --------->TOE2(3)--------->AGP1                 <-----------GT1           --------->ALFIN1         <---------At4g35610         >>>>>>>>>>>>>>>>>LFY ---------->DOF2 --------->TCP20       --------->At4g35610             <   ctagctatagcttccattgtcacgattcctcccaaagcgtagaatgtggaaccctagatacctcaaattcagctagagatctatctactttcacctctat  19243600                                                                   <---------At4g35610                                                                   <---------ZAT2                                                                   --------->At4g35610                                                                  ------------>AtMYB77                                                                  ----------->RAV1(1)                                                                  ============================MYC_MYB                                                                --------->LBD16                                                               --------->ANAC46                                                              <---------LBD16                                                           ------>ZmHOX2a(2)                                                          --------->GLK1(1)                                                          <------ZmHOX2a(2)                                                          <---------GLK1(1)                                                         --------->ARR14(3)                                                         <---------ARR14(3)         <---------TGA1a                                                         --------->ARR14(2)         <---------ANAC55(2)                                                         <---------ARR11(3)         ----------->GT1                                                         --------->ARR11(3)         <---------O2                          --------->AGP1                 <-----------ARR10          =================                      <---------At4g35610                <---------ARR14(2)         --------->O2                      --------->At4g35610<---------ANAC46<---------AGP1   <---------ANAC58          --------->HSFB2a(2)    --------->ANAC46       <---------CCA1(2) <---------ANAC58          <---------HSFB2a(2)  <---------ALFIN1  <-----------RAV1(1) <---------MYB46(3)  --------->GLK1(1) ----------DOF2      <-----------HVH21 --------->ATHB12 <---------At4g35610         <---------ANAC46   tactttctacttctgaaacccctcatcagagctacacacagtgatgggaaactgttgcagatctcccgcagcagttgctagagaagacgtgaaatccaac  19243700                                     <------NtERF2                                     --------->At5g28300                                 ------>NtERF2                                 <---------ERF1                                 --------->LBD16                                 <---------DEAR4(2)                                 <---------RAP2.3(1)                                 <---------ATERF1(1)                                --------->ATERF1(2)                                <---------ATERF1(2)                               --------->DEAR4(2)                               --------->ERF1                               --------->RAP2.3(1)                               --------->ORA47(2)                               --------->RAP2.6(1)                               --------->ATERF1(1)                               <---------LBD16                               <------NtERF2                              --------->ABI4(1)                             --------->DEAR3(1)                             --------->RAP2.3(2)                             <---------DEAR3(1)                             --------->RAP2.3(3)                             <---------ATERF1(2)                            --------->ORA47(2)                            --------->ATERF1(1)                            --------->RRTF1(1)                            --------->RAP2.3(1)                            --------->DEAR4(2)                            --------->ERF1                            --------->RAP2.6(1)                           ------>NtERF2                           <---------DEAR4(2)                           <---------ATERF1(1)                          --------->ANAC58          --------->DEAR3(1)                          --------->ANAC58         --------->RAP2.3(1)                          <---------DEAR3(1)       <------NtERF2                          --------->ANAC46        <---------ATERF1(1)                   --------->LBD16  <---------MYB46(3)              --------->ANAC58------>NtERF2     --------->ATERF1(1)              --------->ANAC46<---------ATERF1(1)<---------DEAR3(1)              --------->ANAC58<---------RAP2.3(1)--------->DEAR3(1)           <------ZmHOX2a(2)<------NtERF2       --------->RAP2.3(1)          <-----------HVH21<---------RAP2.3(1) <---------RAP2.3(1)    ------>NtERF2 --------->ANAC58  <---------DEAR3(2)<---------ARR14(2)                            -   --------->LBD16--------->ANAC58 <---------DEAR3(1) --------->ARR14(2)                          <--   --------->ANAC46<------NtERF2--------->DEAR3(1)------>NtERF2                              <------ZmHOX2a(1)   ------>NtERF2  --------->ANAC46<------NtERF2<---------ATERF1(1)                        --------->HSFB2a(2)  <---------RAP2.6(2)---------->DOF2----------->GT1--------->ATERF1(1)         --------->ANAC58  <--- <---------LBD16 <---------LBD16<---------DEAR3(1)<---------RAP2.3(1)          --------->ANAC58 ----- ===============================bZIP_DOF      <---------DEAR3(1)   <---------------------WRI1--------   tattccggccacgatcacgcccgcaaagacgccgccggcggtaaaaaatcggcgccgattcgagttctaagcgatgttcccaaggaaaacatcgaggacc  19243800                                   <---------ANAC58                                   <---------ANAC58                                   <------MYB83                                   <------MYB46(1)                          ------>MYB46(1)                                  <---------AtMYB61                         -------->P                            <---------ANAC46                                ------>MYB83                           <------NtERF2                                  <---------MYB59                           ------>NtERF2                              ----------->HVH21                          ------>NtERF2                              <-----------HVH21                         <---------DEAR3(1)                         <---------ANAC58                         <------NtERF2                              =================MYC_MYB       --------->ANAC46 ------>NtERF2 <-----------HVH21             --------->O2 <---------ANAC58       ----------->HVH21--------->At4g35610                         --------->ANAC55(2) <---------ANAC58       <------NtERF2--------->bZIP60(1)            <---------ANAC55(2) <---------ANAC58       <---------At4g35610                         <---------ANAC46 --------->ANAC55(2)    --------->ATERF1(1)                         <---------TGA1a <---------ANAC55(2)    <---------LBD16                             --------->TGA1a -------->MYB52(2)     <---------ATERF1(1)                          <---------O2 <---------ANAC58 -------MYB52(1)       --------->DEAR3(1)    =================================MYC_MYB ----GAMYB            <---------DEAR3(1)     -------->P             <---------ANAC58          ------>ZmHOX2a(2) ------>GT1   --------->ZAT14     --------->MYB111(2)            ------>ZmHOX2a(1)            ======= ---->MYB.PH3(1)     ------>NtERF2--------->MYB46(2)             ====================================HOX2a_HOX2a   gttacttactcgacagagaactcggccgcggcgagtttggtgtcacttacctctgtatcgagaggtcctcgcgtgacctactcgcttgcaaatcgatctc  19243900  Previous    Next  AGI:  At3g51850.1    Description:  CPK13 (calcium-dependent protein kinase 13); calmodulin-dependent protein kinase/ kinase. similar to ATCDPK1, calmodulin-dependent protein kinase/ kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT1G18890.1); similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.2); similar to CPK30 (calcium-dependent protein kinase 30), calmodulin-dependent protein kinase/ kinase/ protein kinase [Arabidopsis thaliana] (TAIR:AT1G74740.1); similar to putative calcium dependent protein kinase [Oryza sativa (japonica cultivar-group)] (GB:BAB92912.1); similar to unnamed prot Range:  from: 19243444    to: 19246866    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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