Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->YAB1                                                   ------                           --------->TOE2(3)                                                   ------                     <-----------ARR10                             <---------GLK1(2)          <<<<<<<                     <---------ARR11(1)                 <----------DOF2                       <<<<<<< -------ARR11(3)     --------->ARR14(2)      --------->CCA1(2) ---------->DOF2       --------->GLK1(1) ------>ARR11(3)     <---------ARR14(2)     --------->ARR11(3)<---------AHL20(2)    <---------ARR11(3) ----->CCA1(1)       ------->TEIL           <---------ARR11(3)--------->AHL20(2)    --------->ARR11(3) ----->RVE1(1)      <---------ARR14(1)    <---------TOE2(3)--------->YAB1 <----------DOF2  --------->MYB46(3)   tatctaagagtaatccaaggtcgaatctacattaagaacaaattgagatatactcactctttaataaaagagtctcctttctcacagatatcaacaatct  19224300                                                                <---------ICU4                                  --------->ANAC58             <---------ATHB12                                  --------->ANAC58           --------->GLK1(1)                               ----------->HVH21          ------->GAMYB <----------DOF2              <-----------HVH21        ----------->RAV1(1)        <---------ALFIN1 --->YAB1                  ----------->RAV1(2)         --------->MYB52(1)         --------->REM1(1) --->TOE2(3)              -------->P                   ------>MYB83         --------->DAG2 <<ARR1          <---------At4g35610                   ------>MYB46(1)     ---------->DOF2    ------- <<ARR2          --------->At4g35610                --------->ANAC46  --------------->AGL15   -------   tagcttttggtttgcattcagctaaaacaacctgtaacgcctctgcaattgaaaacccaacagaaatcaatactcgataaagctacaccttcaaaaccct  19224400                                                                   <---------ZAT18                                                                   ------>NtERF2                                                                  --------->DEAR3(1)                                                                 --------->ATERF1(1)                                                                 --------->RAP2.3(1)                                                                 <------NtERF2                                                                <---------RAP2.3(1)                                                                <---------ATERF1(1)                                                                <---------DEAR4(2)                                                               <---------RAP2.3(2)                                                               <---------DEAR3(1)                                                              <---------At4g35610                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)                                                        --------->ARR11(3)                                                        <---------ARR11(3)                                                       ------->GAMYB                                                     <---------TOE2(3)                                                    <-----------GT1--------->ABI4(2)                      ---------->DOF2               <---------DOF5.7(2)                      <------ZmHOX2a(1)     --------->ARR14(2)                           --------->DOF5.7(2)                     <----------     <---------ARR14(2)       ---------->DOF2   <---------ZAT6--------->At4g35610  ----------->STF1 -->TOE2(3)         --------->ANAC58         <-----------GT1---------->CDC5      ----------->TGA1---- -->TOE1(3)         --------->ANAC58  ----------->GT1<---------TOE1(3)           ----------->HVH21   aaatccaaatcggacttaaaacaagaaaggaagaaagagagggtgtattactgttaacgatctcagcggcgctcttgtacttggtgacgacttcaggaga  19224500                                                                                                   <-        <---------ZAT2                                                    --------->ANAC58       ----        --------->ZAT2                                                    --------->ANAC58      <----        <---------At4g35610                                               ----------->GT1     <------        --------->At4g35610     --------->SPL7          --------->HSFB2a(2)<xxxxxxxxxxxxxxxxxxxsmallRNA(se3) -RAV1(2)          <---------CCA1(2)     <---------CCA1(2)         <-----------RAV1(2) <---------TOE2(3) ------->GT1 ------>ZmHOX2a(1)<---------SPL7  --------->YAB1--------->GLK1(2)          <---------TOE1(3)   ggtaagactcagctccttctcgtctctctcatcgtccgaactcatctctgataactctcgagaatcgaaacaggggaagcaaaaatgttagggtttaagg  19224600                                                                                      *TSS                                                                                  <---------At4g35610                                                                                  --------->At4g35610        <---------ANAC46                                                          <---------ZAT14      --------->ALFIN1                                                            --------->ZAT14   --------->ATHB12                                                               <---------ZAT18 -----ZmHOX2a(1)                          --------->ALFIN1                      --------->ZAT18 ----->ALFIN1               <------ZmHOX2a(1)            <---------TOE2(3)      <---------ZAT18 --ZmHOX2a(1)       <---------ANAC46      <-----------RAV1(1)    <---------TOE2(3)--------->ZAT18 ---TOE2(3)      <-----------RAV1(1)  ---------->DOF2  ---------->DOF2       <---------ANAC46   <----   aggagcgattgggggaaaactggtggagaaggagagaaatgaaagtgttggctcaaataaaggtactagggttttcgctatgtgtgctctcttcttctaa  19224700             <---------KAN4(1)          <---------ANAC58     <---------MYB52(1)                 <---------ANAC55(2)    <---------RAP2.6(3)            <---------ICU4                             <---------At4g35610   <---------ANAC46        <----------DOF2    <----------DOF2                 <---------ZAT2   <---------ANAC58        <---------DAG2 <---------MYB52(1)                  --------->At4g35610   <---------ANAC58  ----------->HVH21  <---------ANAC58                     --------->GLK1(2) ------>NtERF2     ------>ZmHOX2a(1)<------------CBF               <------NtERF2 -----TOE2(3)--------->KAN4(1)  --------->TOE2(3)                ----------------->AGL1         -----   cgatgccgttttggattaatcctgtaacgctttttcttaattgcgttacttttgtactccagtatgggccgaagaagggaagctgtttcagaattgtggc  19224800                                              <---------ANAC46                                         <---------O2                                         <---------TGA1a                                         ===================bZIP_DOF                                     <-----------HVH21                                    --------->ANAC58                            ==================bZIP_DOF                     --------->PCF2 --------->ANAC46                     <---------PCF5 --------->O2                     <---------TCP16(1)  --------->O2                     <---------TCP20========================bZIP_DOF                     ------>NtERF2  --------->bZIP60(2)                     <---------TCP15(1)  --------->TGA1a                   --------->LBD16  --------->ANAC58                                     <-----------RAV1(1)                 <---------LBD16    <---------TGA1a   --------->ANAC46                   --------->ICU4              ----------->HVH21     --------->TGA1a--------->ARR14(2)               --------->ANAC55(2)            --------->ANAC46=======================bZIP_DOF   --------->LBD16       <---------ANAC55(2)            --------->TOE2(3)       <---------O2 <----------DOF2                <------MYB83         <---------At5g28300---------->DOF2--------->ALFIN1  --------->ANAC46   <------MYB46(1)   <-- ---->ZAT18 --------->TOE1(3)     <---------ALFIN1 <---------ARR14(2)    ----------->RAV1(1)      ---   cactaaacatttacccttaaccgggcccatataagcccacgtcaagtggcgcttatacgctctccgtaagagagccaacatttggtatgtaatgttgcaa  19224900                              --------->AHL20(2)                          <---------AHL20(2)                          <---------YAB1                         --------->AHL20(2)                         <---------AHL20(1)                        <---------ZAT18                         --------->AHL20(1)                        --------->ZAT14           <-------               <---------AHL20(1)                       ------->TEIL            --------->ZAT18               --------->AHL20(2)            --------->YAB1        --------->ZAT18         ------>MYB46(1) <---------YAB1<---------AHL20(2)        <---------------AGL15     <---------ZAT14         ------>MYB83 -------ATHB51 --------->AHL20(1)        --------------->AGL15<-------GAMYB<---------GLK1(2) <------- ------>AHL20(2)        --------->YAB1  ----------------->AGL3<---------At4g35610  --------->ANAC46   attattcttcaagacaataaattcaaatataattcaatattgtccaaatatagtgatgtacttcagttgtgcacatagaaactccactaaaccaactttt  19225000                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                         <---------YAB1                                                                        --------->AHL20(1)                                                                        <---------AHL20(1)                                                                    <---------AHL20(2)                                                                    -------->HAHB4                                                                    --------->ATHB51                                                                    <---------ICU4                                                                    -------->ATHB1                                                                    <--------HAHB4                                                                    --------->YAB1                                                                   --------->ICU4                                                                   <---------ATHB51                                                                <---------AHL20(2)                                                     --------->GLK1(2)  <---------AHL20(2)                                               ----------->RAV1(1) <---------YAB1                                              --------->ANAC46  --------->AHL20(2)                                              --------->ANAC58  <---------YAB1<-----------GT1                                 ---------->DOF2    --------->ARR14(2) --------->AHL20(2)                              --------->HSFB2a(2)   <---------ARR14(2) --------->YAB1     <-------TEIL             <---------HSFB2a(2)   <---------GLK1(2) <---------YAB1            ----- ---DOF2                     <---------ANAC46 --------->ANAC58 --------->AHL20(2)              <----- --DAG2                   <-----------RAV1(1) <---------ALFIN1 <---------AHL20(2)         -----------   agatagatgcattcacaaattttcaacaatgtcgcgaaagtctaatccacaccagattctaacattttaattattatatttaactatacatactctaatc  19225100                                                                                                  <--                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                 --------->YAB1                                             ------>MYB46(1)                                <---------AHL20(2)                                          ------>MYB83                            --------->YAB1                                                <---------MYB59 ---->YAB1   --------->REM1(2) --------->AHL20(2)                                       <---------ARR11(3) ----ATHB12------->MYC3   --------->ANAC58               --------->AHL20(2)             --------->ARR11(3) ---->AGL15<-------MYC3   --------->ANAC58---------->DOF2<---------AHL20(2)         ---------->DOF2   agcatgagtcaaacgtgtacaatagcccaagcatataataagaccaaagtcaaactcaaataaatgtctccaaactcaaaacttgaaaaagacctaatta  19225200  Previous    Next  AGI:  At3g51800.1    Description:  ATG2 (G2p-related protein); metalloexopeptidase. similar to MAP2A (METHIONINE AMINOPEPTIDASE 2A), methionyl aminopeptidase [Arabidopsis thaliana] (TAIR:AT2G44180.1); similar to unknown [Populus trichocarpa] (GB:ABK95017.1); contains InterPro domain Proliferation-associated protein 1 (InterPro:IPR004545); contains InterPro domain Peptidase M24, catalytic core; (InterPro:IPR000994); contains InterPro domain Peptidase M24, methionine aminopeptidase; (InterPro:IPR001714) Range:  from: 19222004    to: 19224686    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version