Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->ANAC46                            <---------ICU4                           <---------YAB1                <XXXXXXXXXXXXXXXXXXXMIR394A/B                         --------->YAB1                 <---------ANAC46                       <---------ARR11(3)               <---------bZIP60(2)                       --------->ARR11(3)  <---------ANAC58               --------->TGA2(2)     --------->ZAT6  ----------->HVH21              <-----------TGA1    <-----------GT1   <-----------HVH21             <---------ANAC46  <---------ICU4    <---------At4g35610         <---------TGA1a<------ZmHOX2a(2)  <---------ANAC58                                    ------ -----ZAT6   <---------ANAC58 --------->ICU4     ----------->RAV1(2)                  <---------YAB1 ------>GT1  <---------ANAC58 <---------YAB1    ------->TEIL             --------->MYB52(1)   <------   gttaaactctcacttgcgtcatcaagatcatcatttttaccagtaacttgcacctgtgatgtggaaagaatgacaaaacgaattggttatgaatggattg  19210100                                                                            --------->ARR14(2)                             <---------ANAC55(2)                            <---------ARR14(2)                             --------->ANAC46                               <---------GLK1(2)                             --------->ANAC55(2)                    <---------ANAC58         <---------LBD16     --------->ANAC55(1)              --------->ATERF1(1)      ---------->DOF2        --------->ANAC58    <------ZmHOX2a(1)  <---------ANAC58   --------->TOE1(3)         --------->ANAC58 --------->HSFB2a(2)  ------>NtERF2   --------->TOE2(3)----------->GT1           <---------HSFB2a(2)<------NtERF2   <---------At4g35610 ------------------------>ANAC81              <-----------RAV1(2)<---------DEAR3(1)<-----------TGA1 ----->GT1 --------->LBD16  <-------TEIL      <---------LBD16 <---------LBD16 <-------TEIL        <-- ---WOX13(1)      ----------->GT1  --------->TOE1(3) <--------P --------->LBD16  --------->At4g35610   aaaaacctaaaaccggaaaacagagaaaaatacgtaaccttcagtcttccaggaggtagtttgagccggggcgtttcagattcagcgtcatttttcaaat  19210200                                                                   <------NtERF2                                                                   --------->ANAC58                                                                   --------->HSFB2a(2)                                                                   --------->ANAC58                                                                   <---------HSFB2a(2)                                                                  <---------LBD16      <---------bZIP60(2)                                                          <---------ARR14(2)           ==============                                                          --------->ARR14(2)           <---------O2                                                        --------->LBD16                <---------TGA1a                                                       <---------HSFB2a(2)          ----------->HVH21                                                       --------->HSFB2a(2)        <---------ANAC58                           <---------ARR14(2)         <---------LBD16             <---------ANAC58                   --------->LBD16                   --------->MYB52(1) --------->HSFB2a(1)                  --------->LBD16                 --------->At4g35610   <---------HSFC1(2)                  <---------LBD16                 <---------HSFB2a(1)   <---------HSFB2a(1)         -     <---------ARR11(3)    --------->ARR14(2)     --------->HSFC1(2)    <---------At4g35610      <---     --------->ARR11(3)<---------At4g35610        <---------HSFC1(2)--------->LBD16 <----------ARF1 < --------ID1     <---------LBD16 --------->ANAC46 --------->HSFB2a(1)   --------->HSFC1(2)     <-----   gagacgagttcttgggcatcccgggagcggtttcccagcaaaatggaacagaagcttccggaaactggcccggaagcttctcttgggtgacatggcgctt  19210300                                        <---------MYB52(1)                                      ----------->GT1                                     ------>ZmHOX2a(2)                          --------->At4g35610                                   <---------ARR14(2)                           <---------At4g35610 =====bZIP_DOF                     --------->ARR14(2)          ------->GAMYB<---------ARR11(3) -------->ETT(2)                <---------HSFB2a(2)<---------ICU4      <-------TEIL ------ANAC46                   --------->HSFB2a(2)<--------HAHB4<---------MYB52(1) ---------ETT(2)               <---------LBD16    <---------ATHB12    --------->CCA1(2)         <---- -----DOF2                    <---------LBD16   --------->WOX13(1)--------->SPL7----------->RAV1(2)   cgtcgacaagaatggagcattgaagttcaatcttcgggatcggttaatatccatcatttcttcaaccgtaagatacaaaatcatctgagtgggaagggta  19210400                                                       <---------ANAC46                                                  <-----------RAV1(1)                                                <----------DOF2                                               ------>ZmHOX2a(2)                                    <                                              <------ZmHOX2a(2)                                    <-                                             --------->ARR11(3)                         ---------->DOF2         <---------ANAC58                    --------->AGP1                         --------->At4g35610         <---------ANAC58                    <---------ARR11(3)                    --------->MYB52(2)     <---------ANAC58                       --------->GLK1(1)                  <---------MYB46(3)  --     <---------ANAC58----------->GT1        <---------GLK1(1)                *TSS<---------MYB52(1)-- -----KAN4(2)  ---------->DOF2             ----------->ARR10         <----------DOF2<---------At4g35610   tgttcttgtttgcgacccaaagaaggcaaaattgtgagtttgggagagatctttgttgtgttgacactcttcttttctagtttgttagctgaaagttgaa  19210500                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)                                                                                    <------ZmHOX2a(1)                                                                                   --------->At4g35610                                                                                 <-----------RAV1(2)                                                                                 <XXXXXXXXXXXXXXXXXXX                                                                                <XXXXXXXXXXXXXXXXXXXXMIR396A                                                                  <------------CBF <---------At4g35610                                                                <---------YAB1 <-----------HVH21           <---------MYB46(3)                            <---------ZAT18      =======================    --------->YAB1                                      <---------RAP2.6(2)   =======================bZIP_DOF ---------AHL20(2)                                    <-----------RAV1(1)--------->ZAT18 --------AHL20(2)                           <---------ARR14(2) =========================bZIP_DOF  --- ------->AHL20(2)                <---------ANAC46<---------MYB52(1)      <---------ZAT14  <----------DOF2 ------->AHL20(1)           <----------DOF2 --------->ARR14(2) <----------DOF2--------->TGA1a    ----   atttaatgagaagttgttgaaagtttgaaactttctcgtgtatgcaaaaccgatatttgtggcctctttattgtgttcacaggtcaggagagctttggaa  19210600                          ----------->GT1                        ----------->GT1                                --------->HSFB2a(2)                       --------->ALFIN1                                <---------HSFB2a(2)                      ------->MYC3                                  --------->ARR14(2)             --                      <-------MYC3                                  --------->GLK1(2)        ------>ZmHOX2a(1)                  <---------ATHB12               ------>MYB83       <---------ARR11(1)      <-------- XMIR396B        ------>MYB83            <---------YAB1             <---------ARR14(2)  <---------GLK1(1) =========================MYC_MYB      --------->YAB1              <---------CCA1(2)    --------->GLK1(1) ------>DAG2     -------->P   --------->AHL20(2) ------>MYB46(1)----------------->AGL2--------->ATHB12 ------>DOF2     ------>MYB46(1)      <------ZmHOX2a(2)<---------ARR11(3)        <------ZmHOX2a(1) <-   aaagttgagtttccaatccaaccatgtggtgataaaatcgatcatgaaaccaaacaagaactcaaacccaaatctagaagtaaggagatgatttcctcat  19210700                                                                                                  <--                                                                                                  ---                                                                                                 ----        ---------->DOF2                                                                        <-----  ----------->GT1             --------->ARR14(2)                                            <-------- ------->ANAC55(2)            <---------ARR14(2)                                     <---------ANAC58 -------AGL15                <------ZmHOX2a(1)                                       <---------ANAC58 --------ANAC55(2)         <---------TOE2(3)           ----------->GT1       <----------DOF2<--------   caagtgataaaaaagaatgttgaaatattgaggatactcttggtgaaacatgttgaaatgtaagaagaatgaatagtttctttgttttcttgtttcagga  19210800                      <----------DOF2                     <---------ANAC58                     <---------ANAC58          --------->ARR14(2) ----ZmHOX2a(1) --------->LBD16                                                          --------->ANAC55(2) -------->GT1  --------->LBD16          --------->ANAC58                               <-----------GT1 ------->GT1  --------->LBD16           --------->ANAC46                        <-------TEIL<-------- -ZmHOX2a(1)  <---------LBD16           --------->ANAC58     --------->DAG2    --------->CCA1(2) -LBD16   <---------ARR14(2)     <---------ICU4----------->GT1----------->GT1 <---------ARR14(2) ---RAV1(2)  <---------LBD16   --------->GLK1(2)           ---------->DOF2    --------->ARR14(2)   ggataaaaaacaaatccccggatgcttttggagaatcaatacaagaaacatgtaaaaaaaaaaaaggtgaagaagttacagatacaattttacataattc  19210900                                          --------->HSFB2a(2)                            --------->ANAC58                --------->AHL20(2)        <---------HSFB2a(2)             --------->AHL20(2)   --------->YAB1            --------->AHL20(2)   <---------ATHB51                                     <---------ARR11(3)            <---------AHL20(2)   <---------ATHB12          >>>>>>>>>TBF1              --------->ARR11(3)   ----------->GT1     ---------->DOF2    --------->HSFC1(1)                        ----------->ARR10   <---------YAB1  ---------->DOF2<--------ATHB1   <------ZmHOX2a(1)              <--------P -ICU4  --------->AHL20(2)  --------->ANAC58      <----------ID1         <-----------GT1  <<<<<<<<<TBF1   cagtgatgaaaaaaataaataaaaagaaagaagcaataatacatctagaaataggacagaagaagaagtccaatttcaccagaggtaagttcttcttcgt  19211000  Previous    Next  AGI:  At3g51760.1    Description:  unknown protein Range:  from: 19209125    to: 19210477    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g51770.1    Description:  ETO1 (ETHYLENE OVERPRODUCER 1). Identical to Ethylene-overproduction protein 1 (ETO1) [Arabidopsis Thaliana] (GB:O65020;GB:Q6PWY3); similar to EOL2 (ETO1-LIKE 2), binding / protein binding [Arabidopsis thaliana] (TAIR:AT5G58550.1); similar to EOL1 (ETO1-LIKE 1), binding / protein binding [Arabidopsis thaliana] (TAIR:AT4G02680.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ81339.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63856.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21412.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro Range:  from: 19210760    to: 19215441    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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