Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ----------->RAV1(1)                                                                        -------->HAHB4                                                                        <---------ICU4                                                                        --------->YAB1                                                                        --------->ATHB12                                                                       --------->ICU4                                                                       <---------YAB1                                                                     <---------ICU4      --------->ZAT14                                                --------->YAB1      <---------ZAT14                                               <---------ATHB51      ------->TEIL <----------DOF2                                              ----------->GT1   --------->REM1(1)   < ----At4g35610                                      <----------DOF2 <---------AHL20(2)--------------- --->At4g35610                         ------>ZmHOX2a(1)  <----------DOF2  ------>ZmHOX2a(2)---------   agactttgtgtagtgtctatatgtatggattcaaacacatcctccaaaatgtccctttgcctttgtgtaaataatgatcgctacaacaattgtacctcta  19199600                                                                                                    <                                                                                                    -                                                                                                    <                                                                                              -------   <---------bZIP60(1)              <---------AHL20(2) <---------ZAT18         --------->GLK1(1)<----   --------->bZIP60(1)        <-----------GT1          --------->ZAT14         <---------GLK1(1)-----   <---------GLK1(1)       <---------MYB46(3)     <---------YAB1     <-------MYC3          <---------ICU4   --------->TGA2(1)       --------->MYB52(2)  --------->ARR11(3)    ------->MYC3         <---------AHL20(2) --------->YAB1       <---------TOE1(3)        <---------ARR11(3)   --------->TGA1a       --------->AHL20(2) ---------YAB1  <---------------AGL15         --------->YAB1        <---------TGA1a       --------->AHL20(1) >AtSPL8  --------->ZAT14  ----------->GT1  <---------WOX13(1)    <---------ALFIN1       --------->AHL20(2) >ZAT6<-----------GT1 <---------TOE2(3)  <---------YAB1<---------ZAT14       <------ZmHOX2a(1)<------   ctatgatatcactgtattctatttgaggtttgttacattttatatgaatgatattagtgtagtttgccacacgtttgaaggatttctcaaaaaaaattac  19199700                                                       ----------------->AGL1                                                  <---------O2                                                  <---------ANAC46                                                  <---------bZIP60(1)                                                  --------->bZIP60(1)                                                  --------->O2                               --------->ANAC58   <---------ANAC58                               --------->ANAC58   --------->TGA1a             --------->ANAC58                        --------->ALFIN1          <---------TGA1a             --------->ANAC58                       --------->ZAT18            ===================bZIP_DOF --------->ANAC46              --------->ARR11(3)                  >>>>>>>>>>AtbZIP1      >>>>>>>>>>WRKY26         --------->ANAC58   <---------SPL7        ===================bZIP_DOF --------->bZIP60(2)    <-----------GT1   <---------ANAC58         ----------->HVH21        --------->WRKY38(1) ---------AHL20(2)    <---------ANAC58         ----------->TGA1         ----------->HVH21 -------->AHL20(2)    <---------ZAT6    <---------TOE1(1)  --------->DAG2>>>>>>>>>>WRKY43 ---------YAB1<---------AHL20(1)        <---------TOE2(1) ---------->DOF2>>>>>>>>>>WRKY38 -->AHL20(2)  <---------ARR11(3)    <------MYB83  <---------bZIP60(2) --------->CCA1(2)           --- -----ANAC55(2) --------->ARR11(3)  <------MYB46(1) --------->ALFIN1 <---------ARR11(3)      -------- ---->ANAC55(2)<---------CCA1(2)--------->ATHB12  <---------ANAC58   --------->ARR14(2) --------->ICU4 -----GT1--------->ANAC58   ------>NtERF2   <------ZmHOX2a(1)      --------->ICU4     ---------->DOF2   atattattaccacgaatatatctagtgtgccgcacgattggtactaggactgacgtggccaaaagtgtcaagatttgaccaagtcatataaagattagtg  19199800               --------->AHL20(1)              <---------ICU4              <---------AHL20(2)              --------->ATHB51                                   --------->AHL20(2)              --------->AHL20(2)                              --------->YAB1             <---------YAB1                                   ----------->GT1             --------->ICU4                                   --------->ATHB12           <---------ICU4                                    --------->ICU4                     <----           --------->YAB1                                <---------YAB1                        <-----          --------->AHL20(2)                           <---------ICU4                         <------          <---------AHL20(2)                           -------->HAHB4                       <--------          <---------ATHB51                             --------->YAB1               <----------DOF2      --------->AHL20(2)                              --------->ICU4                <---------DAG2 ------>GLK1(1)<---------AHL20(2)                     <---------ATHB51           <-----------GT1<---- --->GT1  --------->ICU4    --------->MYB52(1)      --------->YAB1   --------->MYB52(1)---------->DOF2   aattccattgaaataattattttgatgccccaacgagtctcgagacatttttagtaataatgaatgattaaaaacggtcgaaataactttatagccgttg  19199900                                       <------ZmHOX2a(1)       --------->ICU4               --------->ATERF1(1)       <---------YAB1               <------NtERF2 --MYB83                          <---------ANAC46                            --------->YAB1 ----AtMYB61                   <-----------RAV1(1)                         --------->YAB1 ---MYB52(1)              <----------DOF2                             ------------>CBF           ---- -MYB46(3)               <---------MYB52(1)                   --------->DOF5.7(2)                <--- --MYB46(1)          <---------At5g28300       ----------->GT1<---------MYB52(1)              <------   gtcttggtcatgtttctctcgcttaccgtttttttggcgcaggaccaagaagtaaaaactagccgttacccttacaataaacataaactaaactcttgtc  19200000                          --------->ATHB51                          <--------HAHB4                          <---------ICU4                         <---------YAB1                       --------->TOE1(3)                       --------------->AGL15                       --------->TOE2(3)                       --------->YAB1                      ----------------->AGL2                      --------->MYB46(3)                      <---------ATHB12                     ------>MYB46(1)                     ------>MYB83                     -------->P                --------->ANAC58              <---------ALFIN1          ------>ZmHOX2a(1) *TSS ---------->ID1 --------->ANAC58            --------->ZAT14 ----------------->WRI1============================================================================== -------DOF2 ------>ZmHOX2a(1)    <----------DOF2                              --------->ZAT6     <-- ------------------ANAC81--------->ICU4   --------->REM1(1)          <---------MYB52(1)       <------   tttgtcttcttcctcctcactccaaccataattagtcttttgctacaacactcactcactcacttatttccattacctctctcactaaaaatcaaacttt  19200100                                                   --------->ZAT2                                   --------->MYB46(3)   ----------->RAV1(2)                              <------ZmHOX2a(1)    <---------At4g35610 ===============================MADS_MADS         --------->ANAC58             ---------->ID1 <------ ---------GT1             <------ZmHOX2a(1)       --------->ANAC58          <<<<<<<<<TBF1  <---------AHL20(2) ----DOF2     ----------------->AGL3        <---------ARR11(3)         <----------DOF2     <---------   tctctgtctcactctctccaaaaacagaggaaggagaacaaaccaagaactcaagctcccctgctcttctcatctttcttcttcgttttctattttcttt  19200200                                                                                      --------->ZAT18                                                                                      <---------ZAT18                                                                                      <---------ZAT14                                                                                      --------->ZAT14                                 <----------DOF2                                --------->LBD16                                <---------ICU4                                <---------LBD16 <----------DOF2               <---------YAB1                             --------->ARR14(2)        < ----DOF2                    --------->YAB1            --------->ICU4     <---------ARR14(2)        < --GT1  <----------DOF2    ------->TEIL              <----------DOF2<-----------GT1 <-----------ARR10   cttctttattctttgattcttttgaaatgaatcatctttacaaaaacccatttcgcatttatgaaattagtttccatttctgcgcgagtctactcttgtg  19200300                                       <---------AtMYB61                                       --------->ALFIN1                                    <---------AtMYB61                               <---------MYB46(3)                              <---------DEAR3(1)                              --------->ALFIN1                              <---------AtMYB61                             <-------PIF5                             ------->PIF5                            <---------ZAT2                            <---------At4g35610                          <-----------RAV1(2)                                                   -----                          <---------ANAC46 <---------MYB46(3)                                   -----             <---------At4g35610 <---------ANAC46                                          --------->ANAC58             --------->At4g35610 --------->ALFIN1                                          --------->ANAC58  <-----------GT1    <---------MYB46(3)<---------DEAR3(1)                             --------->ANAC46 ---------ANAC58     <-----------RAV1(1)<---------MYB46(3)                         <-----------HVH21 ---------ANAC58     =================RAV <---------AtMYB61              <-----------RAV1(2)    -----   tttcttactcttctctgctcaagctgttgcaggtggtggaggtggtggtcactcttgggatggaatcgtggtgactcaggcgaactatcaggcactccaa  19200400                                                                            --------->ZAT2        --------->ANAC46      --------->GLK1(1)                             ----------->RAV1(2)        --------->ANAC58   --------->LBD16                                  <---------ZAT2        --------->ANAC58 <---------LBD16                    ------>ZmHOX2a(1) ---->ANAC46          <---------ZAT14                    ------>NtERF2     ------>NtERF2            - ---->ANAC58    <---------WOX13(1)   ---------->DOF2  ------>NtERF2        --------->LBD16         <- ---->ANAC58  --------->ATHB12<---------GLK1(1)--------->MYB46(3)        <---------LBD16         ----   gctatcaaacacgaactcattgacttcaccggagttctcaaaagctggaacaactctgcctcctctcaagtttgctccggctgggctggaatcaaatgcc  19200500  Previous    Next  AGI:  At3g51730.1    Description:  saposin B domain-containing protein. similar to saposin B domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G01800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48844.1); contains InterPro domain Saposin; (InterPro:IPR008373); contains InterPro domain Saposin-like (InterPro:IPR011001); contains InterPro domain Saposin-like type B, 2 (InterPro:IPR008138); contains InterPro domain Saposin B (InterPro:IPR008139); contains InterPro domain Saposin-like type B, 1; (InterPro:IPR007856) Range:  from: 19197645    to: 19199670    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g51740.1    Description:  IMK2 (INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 2); ATP binding / kinase/ protein serine/threonine kinase. similar to MRLK (MERISTEMATIC RECEPTOR-LIKE KINASE), ATP binding / protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT3G56100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48786.1); similar to receptor-like kinase RHG1 [Glycine max] (GB:AAM44273.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41443.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal Range:  from: 19200028    to: 19203030    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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