Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->YAB1                                     <------ZmHOX2a(2)                                    <---------ARR11(3)                                    --------->ARR11(3)                        <---------ZAT14                        --------->ZAT14  <---------ICU4                         ------->TEIL                 --------->ETT(2)  --------->GLK1(1)                         <---------WOX13(1)             --------->ALFIN1 <------ZmHOX2a(1)  <---------At4g35610      <---------YAB1 ------>At4g35610--------->ZAT18   <---------GLK1(1)                 ------>ZmHOX2a(1)             -- ----At4g35610  <---------ANAC46  ----------->ARR10            <---------HSFB2a(1)                <-- --->At4g35610<---------MYB46(3) <------ZmHOX2a(1)             --------->HSFB2a(1)       <---------ARR11(3) >AGL1       <---------AtMYB61==============HOX2a_HOX2a        --------->HSFC1(2)    ---------->DOF2   agaagaaggaaattggtggtggacagaacagaggaggagatcatcatgttcggctaagttcaagaaccctccttatatgatggatgtaaaaggtctgaat  19197200         --------->YAB1          --------->At4g35610                         <------ZmHOX2a(1)    <---------YAB1            <---------At4g35610                 <---------ARR14(2) --------->ICU4            ------>ZmHOX2a(1)    ------>MYB46(1)   --------->ARR14(2)                < <---------YAB1           --------->TOE2(3)     ------>MYB83      <---------GLK1(2)                 < ------->YAB1      --------->bZIP60(1)       --------->MYB46(3)  <---------At4g35610              <-- -------YAB1       <---------bZIP60(1)<---------ANAC46          ----------->ARR10            <-------   atgatgatgaatggtgatgggacatcatcctcagttgctgtcttgaaaccaacaatgtctattgggcagatacttagtaggaaactacttcttgctgatg  19197300                                       --------->GLK1(2)                                      <---------GLK1(2)                                      <---------ARR14(2)                                      --------->ARR14(2)                                     <---------At4g35610         --------->ICU4             ----------->ARR10         <---------YAB1          <-----------HVH21       --------->YAB1           <------MYB46(1)      --------->ICU4            <------MYB83  --------->At4g35610          --------->MYB55(2)  <---------At4g35610          <---------MYB46(3)                                   <-------TEIL  <------NtERF2              <---------MYB52(1)                                  ----------->GT1 ---------WRKY12            <-------GAMYB                                       --------->DAG2 ---------WRKY38(1)        <---------ANAC58                              <----------ID1 ---------HVH21            <---------ANAC58                              ----------->GT1 --At4g35610<---------YAB1 <---------ANAC46             <----------DOF2 ----------->GT1          <---   agtcagcgatgatgatgaatgggagagtttcgttgggtcagattcttggaaagactaactttggagatagagagaaggaaaaaaggttcaatgggaagag  19197400            --------->ANAC58            --------->ANAC58         --------->ARR14(2)         <---------ARR14(2)         <---------GLK1(2)    --------->ARR14(2)    <---------ARR14(2)                                          >>>>>>>>>TBF1   <---------SPL7                          ----------->GT1--------->YAB1                            -  <---------MYB46(3)                 ---------->DOF2   --------->YAB1                   ----------->GT1 ---ZmHOX2a(1)               ----------->GT1        >>>>>>>>>TBF1          <----------DOF2   --------   gaagcggttcggattcgcaaacttgtctgtgatgttaaataaagagagtaagaagaagaataagaagaagaagatagctttgaacttaagttgttaaaag  19197500                                         <---------ANAC46                                         <---------ANAC58                         <---------------AGL15                                         <---------ANAC58                       ----------->GT1                                     <---------ANAC46                      <---------ANAC46  <---------WOX13(1)        <------ZmHOX2a(1)                         <------------CBF             -- -------->ATHB12  <----------DOF2    <---------ANAC58                --------->ATHB12  <------------CBF -->DOF2         <---------ICU4      <---------ANAC58               <---------YAB1--------------->AGL15   agtgattgaaatggtctaatctttacattaggacttgttgtttgtgtgttatctatttgttttcgatgtgtttattggtgtatgctaaatattgaaatga  19197600                                                                                        <------MYB83                                                                                        ----------->GT1                                                                                        <------MYB46(1)                                                                                      <--------P                                                                                     <-------GAMYB                                                                                    <---------MYB46(3)                                                                                   --------->ALFIN1                                                                                 <---------bZIP60(1)                                                                                 --------->bZIP60(1)                                                                                 <---------O2                                                                                 --------->O2                                                                                 <---------bZIP60(2)                                                                                 ==============MYC_MYB                                                                                 <---------TGA1a                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 <---------ANAC46                                                                                 <---------ANAC55(2)                                                                                 <---------ANAC55(1)                                                         --------->ARR11(3)    <---------TGA2(2)                   <---------YAB1                        <---------ARR11(3)   ----------->TGA1            --------->ARR11(3)                          --------->YAB1        ----------->HVH21            <---------ARR11(3)                   --------->ARR14(2)         --------->At4g35610  <---           <---------CCA1(2) ---------->DOF2    <----------TaMYB80  ------->MYC3 --------->ANAC55(2)      ----------->GT1   --------->KAN4(2)    *TSS<---------ARR14(2) <-------MYC3----------->STF1 <--- --------->GT1 <----------DOF2            <------------CBF<---------YAB1    <---------At4g35610  <---   gatgtgatttgttatatctttatgcttattccaaagtccaaactaattgcatattcgaagataatagccacatgtatgagatgacgtggttggataatag  19197700                                                                 <---------At4g35610                                                                 --------->At4g35610                                                               ------>ZmHOX2a(2)                                                              <---------At4g35610                                                              <---------GLK1(1)                                                              --------->GLK1(1)                                                              <------ZmHOX2a(2)                                                             <-----------ARR10                                                             ------->TEIL                                                             --------->ARR11(3)                                                             <---------ARR14(2)                                        --------->ANAC58  --------->ANAC46            <-----------GT1             --------->ANAC55(1)  <---------AGP1            --------->RVE1(1)       --------->YAB1        --------->ANAC58        --------->AHL20(2)   <---------ETT(2)----------------------->TaNAC69(2)    <---------ZAT6       <---------DAG2 --------->ANAC46  --------->ANAC58            --------->AHL20(2)    ----------->GT1   <-----------GT1   --------->ANAC55(2)  --------->ARR14(2)  <---------HSFB2a(2) ------ANAC58        ----------->HVH21  --------->ANAC58 --------->LBD16  <---------WOX13(1) ------ANAC58        --------->WRKY12   <---------ANAC55(2) <---------CCA1(2)<---------GLK1(2) ------ANAC46  --------->TOE2(3)   <-------TEIL          <---------LBD16--------->ATHB12   cttgtagtgttaaaatacctcatttgacctttcgacattcatacgcaatcgactcattccacggatctgcttactcattgattctcgataaattgttctt  19197800                              <-----------------AGL1                        <---------ICU4                        <--------HAHB4                        --------->ATHB12                        --------->YAB1----------->GT1                       <---------ATHB12     --------->ARR11(3)                      ------>MYB46(1)--------->DAG2                 <-----------GT1    --------->DAG2              --------->GLK1(2)======================================================================             <---------GLK1(2)<-----------------AG             --------->ARR14(2)<---------------AGL15                       --------->YAB1        ----             <---------ARR14(2)--------------->AGL15                      <---------YAB1<---------ARR11(3)    --------->DEAR4(1)------>MYB83 ---------->DOF2                  ------->TEIL        --------->ARR11(3) ----------->RAV1(1) --------->WOX13(1)     <---------ARR11(3) <-------GAMYB           <---------CCA1(2)   ctcccacagacaccagattctaccaatcatttgctcgaaaaggtaaaatctttctctacaatttcggttgaatcttttgataactcgatatatctcttgt  19197900                                     <---------LBD16                                <----------DOF2                                --------------->AGL15                       ========================HOX2a_HOX2a                       ------>ZmHOX2a(2)    <---------ICU4                                  ------>ZmHOX2a(2)                     --------->ARR11(3)     --------->ATHB12                              <---------ARR11(3)                     <---------ARR11(3)    --------->ICU4                                 --------->ARR11(3)             ------->TEIL       <---------------AGL15                               <---------ANAC46        <---------ANAC58       <-----------------AGL1                               <------MYB46(1)        <---------ANAC58       <-----------------AGL3 ---------->DOF2          <-----------RAV1(1)        <---------ANAC46<----------DOF2 <------ZmHOX2a(1)        --------->TOE2(3)  <---------ANAC58 ================================================MADS_MADS      <---------HSFB2a(1) <---------ANAC58 ------>DOF2<---------CCA1(2)<-----------GT1--------->YAB1      --------->HSFB2a(1) <------MYB83   aaagactcttgcttgaatcttctgatctttttttctttatcaggaatcatgggtcttaaagctggaacctttgtgcttctcttgttgggtttgatcttgg  19198000                   --------->WRKY45                   --------->WRKY12                   --------->WRKY38(1)                  <---------MYB52(1)                <---------ANAC46             <----------DOF2            ------>ZmHOX2a(2)           <------ZmHOX2a(2)              --------->CCA1(2)          --------->AGP1                 --------->AHL20(1)          --------->ARR11(3)             --------->ARR11(3)          <---------ARR14(2)             <---------AHL20(1)          <---------ARR11(3)             <---------ARR11(3)                             <----------DOF2          --------->ARR14(2)           ----------->ARR10                              <--------------          <---------AGP1          <---------TOE1(2)                        <---------HSFB2a(2)         <---------CCA1(2)        <---------TOE2(2)                        --------->HSFB2a(2)    --------->ANAC58        --------->AtMYB61                       <--------P   <---------ANAC58 ---    --------->ANAC58        <---------ALFIN1                        <---------WOX13(1)--------------- ----------->HVH21--------->DOF5.7(2)<--------P                   --------->ATHB12   <--------------- ----------->TGA1<-------GAMYB   <-----------RAV1(2)             <---------YAB1  <---------ANAC58----   tctctgacgctagatctttcgttgactccaccatctcaggtaagatattagacaaaatttagaattcatggttgattctagaggcttgctctttaggggt  19198100  Previous    Next  AGI:  At3g51720.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48842.1); contains InterPro domain Protein of unknown function DUF827, plant (InterPro:IPR008545) Range:  from: 19196030    to: 19197613    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g51730.1    Description:  saposin B domain-containing protein. similar to saposin B domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G01800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48844.1); contains InterPro domain Saposin; (InterPro:IPR008373); contains InterPro domain Saposin-like (InterPro:IPR011001); contains InterPro domain Saposin-like type B, 2 (InterPro:IPR008138); contains InterPro domain Saposin B (InterPro:IPR008139); contains InterPro domain Saposin-like type B, 1; (InterPro:IPR007856) Range:  from: 19197645    to: 19199670    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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